Bubalus kerabau (carabao): 129630071
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Entry
129630071 CDS
T11435
Symbol
MED13L
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
bke
Bubalus kerabau (carabao)
Pathway
bke04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
129630071 (MED13L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bke03021
]
129630071 (MED13L)
Transcription machinery [BR:
bke03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
129630071 (MED13L)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
129630071
NCBI-ProteinID:
XP_055406326
LinkDB
All DBs
Position
16:62735120..63015655
Genome browser
AA seq
2229 aa
AA seq
DB search
MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRT
LLFKAIHNLLERCLMDKNFVRIGKWFVRPYEKDEKPVNKSTYQFNTNGEENLLQMLNTFE
HLSCAFTFFLHGESNVCTSVEIAQHQPIYLINEEHIHMAQSSPAPFQVLVSPYGLNGTLT
GQAYKMSDPATRKLIEEWQYFYPMVLKKKEEMKEEEELGYDDDFPVAVEVIVGGVRMVYP
SAFVLISQNDIPVPQSVASTGGHITVGQQGLGSVKDPSNCGMPLTPPTSPEQAVMGESGG
AQSAVSHLGTQDGGMLTMHSPKRSGKIPPKLHNHMVHRVWKECILNRTQSKRSQMSTPTL
EEEPANNPATWDFVDPTQRVSCSCSRHKLLKRCAVGPSRPPTISQPGFSAGPSSSSSLPP
PASSKHKTTERQDKGDKLQKRPLIPFHHRPSVAEELCMEQDPPGQKLGLAGIDSSLEVAS
SRKYDKQMAVPSRNTSKQMNLNPMDSPHSPISPLPPTLSPQPRGQEAESLDPPSVPVNPA
LYGNGLELQQLSALDDRTVLVGQRVPLTAEVSETALYCGIRPSNPESSDKWWHSYHLPSV
DDAEFRPPELQGERCDAKTEVTSESTALQRLLAQPNKRFKVWQDKQPQMQPLHFLDPLPL
SQQPGDSLGEVNDPYTFEDGDIKYIFTANKKCKPGTEKESLKKNKSEDGFGTKDVTTPGH
STPVPEGKNAMSLFSSTKTDVRQDNAAGRAGSSSLTQVTDLAPSLHDLDNIFDNSDDDEL
GAVSPALRSSKMPTVGTEDRPLGKDGRAAVPYPPTVADLQRMFPTPPSLEQHPAFSPVMN
YKDGISSETVTALGMMESPMVSMVSTQLTEFKMEVEDGLGSPKPEEVKDFSYVHKVPTFQ
PFVGSSMFAPLKMLPSQCLLPLKIPDACLFRPSWAIPPKIEQLPMPPAATFIRDGYNNVP
SVGSLADPDYLNTPQMNTPVTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRG
GGTASGQGSVKYDSTDQGSPASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNI
FKDRNFDSCCICACNMNIKGADVGLYIPDSSNEDQYRCTCGFSAIMNRKLGYNSGLFLED
ELDIFGKNSDIGQAAERRLMMCQTTFLPHMEGARKPQEPPISLLLLLQNQHTQPFASLSF
LDYISSSSRQTLPCVSWSYDRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSA
TVHSWPHSNVLDISMLSSQDVVRTLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQF
HKMAGRGTYGSEESPEPLPIPTLLVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIV
VCPENEALLEGAKTFFRDLSAVYEMCRLGQHKPICKVLRDGIMRVGRTVAQKLTEELVSE
WFSQPWGSEESDNHSRLKLYAQVCRHHLAPYLATLQLDSSLLIPPKYQTPPAAAQAQVPP
GSAGPLASNPGSATPSAGSAFNPTSNGSSLNPAASSSASGSSGPPVSTSASAPIINQIST
TSSSGFSGSVGGQNPSTGANAAERTQGSLGCAGDTEPGQSSSQPSQDGQESVTERERIGI
PTEPDSADSQAYPPAVVIYMVDPFTYTAEEDSTSGNFWLLSLMRCYTEMLDNLPEHMRNS
FILQIVPCQYMLQTMKDEQVFYIQYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIE
MTLKNPERPSPIQLYSPPFILAPIKDKQTEPGETLGEASQKYNVLFVGYCLSHDQRWLLA
SCTDLHGELLETCVVNIALPNRSRRSKVSARKIGLQKLWEWCVGIVQMTSLPWRVVIGRL
GRLGHGELKDWSILLGECSLQTISKRLKDVCRMCGISAADSPSILSACLVAMEPQGSFVV
MPDAVTMGSVFGRSTALNMQSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPN
NDDMFVDLPFPDDMDNDIGILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERL
LSREAPEELKQQPLALGYFVSTAKAENLPQWFWSSCPQAQNQCPLFLKASLHHHISVAQT
DELLPARNSQRVPHPLDSKTTSDVLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQ
LYNAIMNIL
NT seq
6690 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggcagcgaactgggtggcgaacggggcgagcctggaggattgtcactccaac
ctcttctcgctggctgaactcacaggaatcaaatggcgtaggtacaattttggagggcac
ggggactgtggacccataatttcagccccagcccaagatgatccaatcctgttaagtttc
atccgctgtctccaagccaacttgctgtgtgtatggcgccgtgatgtcaaaccagattgc
aaagagttatggatattctggtggggagacgaacccaatctagtgggtgtaatacatcat
gaactacaggttgtggaagaaggactctgggaaaatggcctttcctatgaatgtcggacg
ctgctcttcaaagcgatccacaatctgttagaaaggtgcctaatggataagaacttcgtt
aggattgggaaatggtttgtccgaccctatgaaaaagatgaaaagccagtcaacaaaagt
acataccagtttaataccaatggagaggaaaatttgctgcaaatgctaaatacatttgag
catttgtcctgtgcgttcacattctttcttcacggggaaagtaatgtatgcacaagtgtg
gagattgcccaacaccagccaatttatttgatcaatgaggagcatatccacatggctcag
tcttcacctgcaccatttcaagtactggtaagtccttatggcttaaacggcacgctaaca
ggccaagcatacaagatgtcagacccagccacccgtaagttgatagaggaatggcagtat
ttctacccaatggtgctgaaaaagaaagaagaaatgaaagaagaggaagagttgggatat
gatgatgatttccccgtggcagtagaagtaattgttggtggtgttcggatggtttatcct
tcagcttttgtgctgatctctcagaatgacatcccagttcctcagagtgtggccagtacc
gggggccatattaccgttgggcagcaggggcttgggagcgtgaaggacccgagtaactgc
gggatgcctctcacccctcccacttctccagaacaggctgtcatgggtgagagtggaggt
gcgcagagtgctgtcagccacctgggcacccaggacggggggatgctaactatgcacagt
ccaaagagatcggggaagattcctccaaaactccacaatcacatggtccatcgagtctgg
aaggaatgcatcctcaacagaacccagtccaagaggagccaaatgtccactccaactctt
gaagaagagcctgctaacaatcctgctacttgggattttgtggatccaacccaaagagtc
agctgttcttgctctaggcataaacttttaaaacgttgtgcggtaggccccagtcggcct
cccacaatatcacagccagggttcagtgcaggaccatcgtcatcttcatctttaccacct
cctgcttcttctaagcacaaaacaacagaaagacaggacaagggagacaagctacaaaag
agacccttgataccatttcatcacaggccgtctgtggccgaagagttatgcatggaacaa
gatccaccgggacagaagctaggcttggcagggatagactcctccttagaggtggctagc
agtaggaagtatgataagcaaatggccgtgccttccagaaatacaagcaagcaaatgaat
ctgaatcctatggattcacctcactcccctatttcccctctgccgccaacactcagccct
cagccacgaggtcaggaagcagagagtttggacccaccctctgtccctgtgaatccagcc
ctctatggaaatgggctcgaactccagcagttgtctgctctggatgaccggacagtcctc
gtaggccaaagagtgcctctcacggcagaggtcagtgagaccgccttatattgtgggatc
aggccctcgaacccagagtcatcagataagtggtggcacagttaccatctaccatccgtt
gatgatgctgagttccggcctccagagctccagggtgagaggtgcgacgccaaaacggag
gtaacctcagagagcactgcattgcaaagactcttagcacaacctaacaaacggtttaaa
gtctggcaagacaagcagccccagatgcagcccctccactttcttgacccattgcctctg
tcacaacaacctggagacagcttgggagaagtcaacgacccatatactttcgaggatggc
gacataaaatacatctttactgcaaacaagaaatgcaaaccagggacagagaaagagtcc
ctaaaaaagaataagtcagaggatggatttggtaccaaggatgtcactacaccaggtcat
tccacgccggtgcctgaagggaaaaatgccatgtcccttttcagttctactaaaacagat
gtccggcaggacaacgctgctggcagggcaggctccagtagcctcacacaggtgacagac
ttggcaccttcccttcatgacttagacaacatctttgataattctgatgacgacgaactt
ggggctgtgtcacctgcactgcgctcatcaaaaatgcctacagttgggacagaagaccga
cctcttgggaaggatggaagagctgctgttccttatccaccaacagttgcagacctgcag
aggatgttccccacccctccttctttggaacagcaccccgcattttctcctgtgatgaat
tataaagatgggatcagctcagagacagtgacagcattaggcatgatggaaagcccgatg
gtcagtatggtttcaacacagctcactgaattcaagatggaagtggaagatggattagga
agtcccaagccagaggaagtaaaggacttttcgtacgtgcacaaagttccaacttttcag
ccttttgtgggatcctccatgtttgctccactgaagatgttgcccagccaatgcctgcta
cctctgaagattcctgatgcctgtctgtttcggccttcatgggcaatccctcctaaaatt
gaacaactgcccatgccacctgcggccactttcattagagatggctacaacaatgtgcct
agtgtcgggagcctggcagatccagattatctgaacacgccacagatgaacacgccggtg
acgctcaacagcgctgccccagccagcaacagtggagcaggagttttaccatccccagca
acccctcgcttctctgtccccacaccacgaacccccaggacaccaagaactcccagagga
gggggcactgccagtggtcagggctctgtgaagtatgacagcaccgaccagggctcacca
gcctctaccccctctaccactcggcctctcaattctgtggagcctgccaccatgcagcca
atccccgaagcccacagtctctatgtcaccctgattctttcggattccgtaatgaatatc
tttaaagacagaaactttgacagctgttgcatctgtgcctgcaacatgaacatcaaaggg
gcggatgtcgggctctacatccccgattcttccaacgaggaccagtaccgctgcacctgt
gggtttagtgcgatcatgaatcgcaaacttggttacaattcgggactcttcctggaagat
gagttggatatttttgggaagaattctgacattggtcaggctgctgaaaggcgcctaatg
atgtgtcagaccaccttccttcctcacatggaaggagccagaaaaccccaggagccaccg
ataagccttctcctcctcttgcagaaccaacacacacagccttttgcttcactgagtttc
ctagactacatttcctccagcagccgccagacccttccctgcgtgagctggagttacgac
cgggtgcaggcagataataatgattactggacggaatgttttaatgccttggagcagggt
cggcagtatgtggataatcccacgggtggcaaagtggatgaagccctggtgagaagcgcc
actgtgcactcctggcctcacagcaatgtgctggacatcagcatgctgtcctcccaggac
gtggtccgtacgctgctgtccctgcagcccttcctccaggacgccatccagaagaagcgc
acgggcaggacctgggagaacatccagcacgtgcaggggccactcacctggcagcagttc
cacaagatggcaggacggggaacctacggttctgaagagtctcctgagccactgcccatc
cccaccctgctggtaggctacgacaaggacttcctcaccatctcgccgttctccttgccg
ttttgggagaggctgttgttggacccatacgggggccaccgtgatgttgcctatattgtg
gtgtgtccagaaaacgaggccttgctcgaaggagccaaaactttcttcagggacttgagc
gctgtatatgagatgtgccgactcgggcagcacaagcccatctgcaaagtgctgcgcgac
gggatcatgcgcgtggggaggactgtggcgcagaagctgacggaagagctcgtgagcgag
tggttcagccagccgtggggcagcgaggagagtgacaatcattccagactcaaactttat
gcgcaagtttgccgccatcacctagcaccttatctggccactctgcagctcgacagcagc
ctgttgataccacctaagtaccagaccccaccagcagcagcacaggcgcaagtgccacct
gggagcgctgggcctttagcttcaaatccaggctcggccacgccctcggcgggcagtgcg
tttaatcccacctccaacggcagttctctgaacccggctgcaagcagttcagcctctggc
tcttccgggcccccagtctccacatcggcctctgctcccatcatcaaccagatcagcact
acctcttcctcaggattcagcggtagtgttggggggcagaaccccagcactggggccaac
gctgcagagagaacgcaagggagcctgggctgcgctggagacaccgagcctgggcagagc
tcctcgcagccctcccaggacggacaggaaagtgttacagaaagggagagaataggcatt
cccacggagcccgactctgcagacagccaagcctaccctccggctgtcgtcatctacatg
gtggaccccttcacgtacactgcggaggaagactccacttccggaaacttttggctgttg
agtttaatgcgctgctacacagaaatgctggataatttacctgagcatatgagaaattct
ttcattctccagattgtgccttgccagtacatgctgcagacaatgaaggatgagcaagtt
ttctacattcaatacttgaagtccatggcattttcagtgtactgccagtgcaggcgacct
ctgcctacacagatccacattaaatccctcacaggattcgggcctgccgccagcattgag
atgactctcaagaacccggagcggcccagcccgatccagctttactcccctccttttata
ttggccccaatcaaagacaagcagacagagccgggagagacactcggtgaagcgagccag
aaatacaacgtgctctttgtgggctattgtctgtctcacgaccagcgctggcttttggct
tcctgcactgatctccatggagaattattagaaacttgtgttgtaaatattgctttacca
aacaggtcacggaggagtaaagtatctgcacgtaagatcggattacagaagttgtgggaa
tggtgcgtcggtattgtccagatgacatctctgccctggagagttgtgatcgggcgactc
gggcgtctaggccacggggaactcaaagattggagtatcctcctcggagaatgttcacta
cagacaatcagtaaacggctcaaggacgtgtgccggatgtgtggaatctctgccgcagac
tcgccttctatccttagtgcctgcctggttgccatggagccccagggctcctttgtagtg
atgccagatgctgtcacaatgggctctgtttttggtcgaagtactgcactgaacatgcag
tcatctcagcttaacacccctcaagatgcttcctgtacacacatcttggtgttcccaaca
tcgtcaaccatccaggtggctccagccaactatcccaatgaagatgggtttagccccaac
aatgatgacatgtttgttgaccttccattcccagatgatatggacaatgatattggcata
ttaatgactgggaatctccattcctctcccaactcctccccagtcccctccccaggctct
ccttctggaatcggcgtgggctctcactttcagcacagtcggagccagggtgagcgtctt
ctttctagggaagcgcccgaggagctgaaacagcagcctctagcccttgggtattttgtg
tcaaccgccaaagccgagaatctcccccagtggttttggtcatcatgtccccaggctcag
aaccagtgtcccctcttcctaaaggcttcgctgcatcaccacatttctgtagcacagacg
gatgaacttctccccgccaggaattctcagcgggttccacatcctcttgactccaaaacc
acctctgatgttttaaggtttgttttggagcagtacaacgctctgtcgtggctcacgtgc
aatccggccacccaggaccgtacctcctgccttcccgtccactttgtggtgctcactcag
ttgtacaatgccatcatgaacatactctaa
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integrated database retrieval system
