Bubalus kerabau (carabao): 129630382
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Entry
129630382 CDS
T11435
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bke03041
]
129630382 (TFIP11)
Spliceosome [BR:
bke03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
129630382 (TFIP11)
Other components
Complex C specific factors
129630382 (TFIP11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
129630382
NCBI-ProteinID:
XP_055406950
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Position
16:complement(70304638..70320910)
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AA seq
837 aa
AA seq
DB search
MSLSHLYRDGEGHMDDDEDERENFEITDWDLQNEFNPNRQRHWQTKEEATYGVWAERDSD
EERPSFGGKRARDYSAPVNFISAGLKKGAAEEAELEDSDDEEKPVKQDEFPKDFGPKKLK
TGGNFKPSQKGFAGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIE
AKQRKGKGAVGAYGSERTTQSLQDFPVVDSEEEAEEEFQKELSQWRKDPSGSKKKPKYSY
KTVEELKAKGRISKKLTAPQKELSQVKVIDMTGREQKVYYSYSQISHKHSVPDDGLPPQA
QPPPPPGKEARAPGFALPELEHNLQLLIELTEQEIIRNDRQLQYERDVVVNLTHELEKAA
GALQQEQRAIASLSEVLALVEECERRLQPGCGDPLTLDECARVFQTLRDKYYEEYRMSDR
VDLAVAIVYPLMKDYFKEWDPLKDCTYGTETISQWKSLLENDQLLSHGGQDLSADAFHRL
IWEVWMPFVRSIVAQWQPRNCDPMVDFLDSWAPLIPVWVLDNILEQLIFPKLQKEVESWN
PLTDTVPIHSWVHPWLPLMQARLEPLYSPIRSKLASALQKWHPSDSSAKLILQPWKDVFT
PGSWEAFMVKNIVPKLGMCLGELVINPHQQHMDAFYWVIDWEGMVSVSSLVGLLEKHFFP
KWLQVLCSWLSNSPNYEEITKWYLGWKSMFSDQVLAHPSVKDKFNEALDIMNRAVSSNVG
AYMQPGAREHIAYLTHTERRKDFQYEAMQERREAENMAQRGIGVAASAVPMNFKDLIETK
AEEHNIVFMPVIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgtcccacctgtaccgggacggggaaggccacatggatgatgacgaggatgag
cgggagaacttcgagatcaccgactgggatctccagaatgaattcaaccccaaccggcag
cgccactggcagaccaaggaagaggccacctacggagtgtgggcagagcgagactcagat
gaggagaggcccagctttggaggcaaacgggcccgcgactactcggcccctgtcaacttc
atcagcgcggggctcaagaaaggggcggcagaggaggcggagctggaggactccgacgat
gaagagaaacccgtgaagcaggatgaatttcctaaggatttcggaccaaagaagttaaaa
acgggtggcaattttaagcccagccagaagggttttgcaggaggaaccaagtctttcatg
gatttcggcagctgggaaagacacacaaaaggaatcggacagaagcttcttcagaaaatg
ggctacgtgcccggaaggggcctggggaagaacgctcaaggcatcattaacccaatcgaa
gccaagcagaggaagggcaaaggtgcggtgggggcatacggctcggagcgcaccacccag
tccctgcaggacttccccgtggtcgactcggaagaagaggccgaggaggaatttcagaag
gagctgagccagtggaggaaagaccccagcggaagcaagaagaagcccaagtattcttac
aagaccgtggaagagctgaaagccaagggcaggattagcaagaagctcaccgctccccag
aaggagctttctcaggtcaaggtcatagacatgacgggccgggagcagaaggtctactac
agctacagccagatcagccacaagcacagcgtccccgacgacgggctcccgccgcaggcg
cagccgccgcccccgcccggcaaggaggcccgggcgcccggcttcgcgctgcccgagctg
gagcacaacctgcagctgctcatcgagctaacggagcaggagatcatccgcaacgaccgg
cagctgcagtacgagcgggacgtggtggtgaacttgacgcacgagctggagaaggcggcg
ggcgcgctgcagcaggagcagcgggccatcgccagcctgagcgaggtgctggcgctcgtg
gaggagtgtgagcggcgcctgcagcccggctgcggtgacccgctcacgctggacgagtgc
gcccgcgtcttccagacgctgcgggacaagtactacgaggagtaccggatgtccgaccgc
gtggacctggccgtggccatcgtctacccgctcatgaaggactacttcaaggagtgggac
cccctcaaggactgcacctacggcaccgagaccatctcccagtggaagagcctcctggag
aacgaccagctgctgtcgcacggcgggcaggacctctctgcggatgccttccacaggctg
atctgggaggtctggatgccgtttgtccggagcatcgtggcgcagtggcagccgaggaac
tgtgacccgatggtggacttcctggacagctgggcgcccctcatccctgtgtgggtgctg
gacaacatcctggagcagctcatcttccccaagctgcagaaggaggtggagagctggaac
ccgctgacagacaccgtgcccatccactcgtgggtccacccgtggctgccactcatgcag
gcgcgcctggagccgctctactcccccatccgcagcaagctggccagcgctctgcagaag
tggcatcccagcgactcctcggccaagctcattctccagccctggaaagatgtcttcacc
cccggctcctgggaggccttcatggtcaagaacattgtgccaaagctggggatgtgcctc
ggggagctggtcatcaacccccaccagcagcacatggatgccttctactgggtcatcgac
tgggaagggatggtctctgtttccagcctggtgggccttctcgaaaagcacttcttcccc
aagtggctgcaggtgctgtgctcctggctgagcaacagccccaattatgaggagatcacc
aagtggtacctgggctggaagtccatgttctcggaccaagtgctggcgcacccgtctgtc
aaggacaagttcaacgaggctctcgacatcatgaacagggcggtgtcctccaatgtcggt
gcctacatgcagcctggcgcgcgcgagcacattgcctacctcacgcacacggaacggagg
aaggacttccagtacgaggccatgcaggaacggcgtgaggctgagaacatggcccagcgg
ggcatcggcgtggctgccagcgccgtgcccatgaactttaaggacctcatcgagaccaag
gccgaggagcacaacatcgtcttcatgccggtcatcgggaagcggcacgagggcaagcag
ctgtacaccttcggccgcattgtcatctacatcgaccgtggcgtggtgttcgtgcagggc
gagaagacctgggtgcccacctcgctgcagagcctcatcgacatggccaagtag
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