Bubalus kerabau (carabao): 129630980
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Entry
129630980 CDS
T11435
Symbol
TSEN34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bke03016
]
129630980 (TSEN34)
Enzymes [BR:
bke01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
129630980 (TSEN34)
Transfer RNA biogenesis [BR:
bke03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
129630980 (TSEN34)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
TSEN34_N
Motif
Other DBs
NCBI-GeneID:
129630980
NCBI-ProteinID:
XP_055407623
LinkDB
All DBs
Position
17:complement(67980744..67984731)
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AA seq
311 aa
AA seq
DB search
MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLL
AEIGAVTLVSAPRPDPRQHSLALASFKRQQEQGFQEQSALAAEARETRRQELLEKITEGQ
AAKKLKLEQESGTSGSQEAGGKQAAEENEASAGQAAGEHEEAHEGSSPQPGPSNGVAPLP
KSALLIQLATARPRPIKARPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAGK
FGGDFLVYPGDPLRFHAHYIAQCWAPEDPIPLQDLVSAGRLGTSVRKTLLLCSPQPDGKV
VYTSLQWASLQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgctggtggtggaggtggcgaacggccgttccctggtgtggggggccgaggccgtgcag
gcgctgcgggagcgcctgggcgtggggggccgcacggtgggcgccctgccccgcgggccc
cgccagaactcgcgcctgggcctcccactgctgctgatgcctgaggaggcgcgactgctg
gccgagatcggcgcagtgaccctggtcagcgccccgcgcccggacccccgtcaacacagc
ctggcactggcatccttcaaacgccagcaagagcagggcttccaggaacaaagcgctctg
gcagctgaggcccgagagacccgtcgtcaggagctactagagaagattacagagggccag
gctgcgaagaagctaaagctggaacaggaatcagggaccagtgggagccaggaggccggt
gggaagcaagctgccgaagagaatgaggccagtgctggccaggctgctggagagcatgag
gaagcacatgaaggctcctctccccagccagggccttcaaatggagtggcccccttaccg
aagtctgctctgctcatccagttggccactgctcggccgcggcccatcaaggctaggccc
ctggactggcgtgtgcagtccaaagactggccccacgctggccgccctgcccacgagctt
cgctacagcatctacagagacctgtgggaacgaggcttcttcctcagtgccgctggcaag
tttgggggtgacttcctggtctatcccggtgacccgctccgtttccacgctcactacatc
gcccagtgctgggctccagaggatcccataccactccaggacctggtttcggctggccgc
ctgggcaccagtgtcagaaagacgctgctgctttgctccccgcagcccgatggtaaggtg
gtctacacgtccctgcagtgggccagcctgcagtga
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