Bubalus kerabau (carabao): 129632535
Help
Entry
129632535 CDS
T11435
Symbol
UTP4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
129632535 (UTP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bke03009
]
129632535 (UTP4)
Ribosome biogenesis [BR:
bke03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129632535 (UTP4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR5
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
EIF3I
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_ACSF4
Beta-prop_WDR75_1st
PEP5_VPS11_N
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
PROPPIN
Beta-prop_RIG_1st
PQQ_2
Beta-prop_TEP1_C
DUF7099
DUF1513
Motif
Other DBs
NCBI-GeneID:
129632535
NCBI-ProteinID:
XP_055410228
LinkDB
All DBs
Position
17:39471862..39501381
Genome browser
AA seq
686 aa
AA seq
DB search
MGEFNVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RATEALCWAKGQRLFSAGLNGEIIEYDLQALTIKYAVDAFGGPIWSMAASPSGSQLLVGC
EDGSVKLFQITPDKIQFERNFDRQKSRILSLSWHPAGTHVAAGSIDYISVFDSKSGSTIG
KMLVDRQYMGVSKRKCIIWGVAFLSDGTVISVDSAGKVQIWDSATGTLVKNHLVSNADVQ
SIAVSAQEDSFVVGTAEGTVFHFQLVSVTSSSSEKQWVRTKPFQHHTHDVRAVAHSPTAL
ISGGTDTHLVIRPLLEKVEVKNYDAALRKITFPHRRLVSCAKKKQLLLFQFAHHLELWRL
GSTVATGKNGDTLPLSKNADHLLHLKTKGPENIICSCISPCGGWIACSTASRFFLYRLNY
EHDNISLQRVSKMPVFLRSALQILFSEDSTKLFVASNQGSLRVIRLLEGGFTHPRAFQPQ
SGTVQSMCLLAVSPDGNWLAASGSSAGVHVYNVKQLKLHCTVPAYNFPVTALAIAPNTNN
LVIAHSDQQVFEYSIPDKQYTEWSRTVQKQGFHHLWLQRDTPITHISFHPKRPMHILLHD
TYMFCLIDKSLPLPNDKTLLYNPLPPTNESDVIRRRTAHAFKISKKYKPLLFVDLLDEKT
LVAVERPLDDIVAQLPPPIKKKKFGT
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatttaatgtccatcgagtgcgtttctttaattatgttccatcagggatccgc
tgtgtggcttacaataaccagtcaaacagattggctgtttcacgaacagatggcactgtg
gaaatttataatttgtcagcaaactactttcaggagaaatttttcccaggtcatgagtct
cgggccacagaagctctgtgctgggcgaaaggacagcgactgtttagtgctggactcaat
ggagaaattatcgagtatgatttacaggcattgaccatcaagtatgctgtggatgccttt
ggagggcccatctggagcatggccgccagccccagtggctctcaacttttggttggctgt
gaagatggatctgtgaaattatttcagatcaccccagacaaaatccagtttgaaagaaat
tttgatcgtcagaaaagtcgaatcctgagtctcagctggcatcctgctggtactcacgtt
gcggctggctccatagactatattagcgtgtttgactccaaatcagggagcactattggt
aagatgctggtggataggcagtacatgggcgtgtcgaagcggaagtgcatcatttggggt
gtggccttcctgtcggacggcactgtcataagcgtggactctgctgggaaggtgcagatc
tgggactcagctaccgggaccctcgtgaagaaccatctggtctcgaatgctgacgtgcag
tccattgccgtatccgctcaagaagacagttttgtggtgggcacagccgaggggacagtg
ttccattttcagctggtctctgtgacttccagcagcagcgagaagcagtgggtgcggaca
aagccatttcagcatcacacccacgacgtgcgagccgtggctcacagccccaccgcactg
atatctggaggcaccgacacccacttagttattcgtcctctgttggagaaggtggaggta
aagaattacgatgctgctctccgaaaaatcacttttccccaccgacggcttgtttcctgt
gcaaaaaagaagcagctcctcctcttccagtttgctcatcacttggaactctggcgactg
ggatccacagttgcaacaggaaagaatggggatacccttccactctctaaaaatgcagat
cacttacttcacctcaagacaaagggtcctgagaacattatctgcagctgtatctcccca
tgtggtggttggatagcctgttctacagcgtctcgtttttttctgtatcgactgaattac
gaacatgacaacataagcctgcagagggtttccaaaatgccagtgttccttcgctctgcc
ctccagattttgttttctgaggattcaacaaagctctttgtggcatcaaatcaagggtct
cttcgcgtcattcggctcctggaaggaggcttcacgcacccgcgtgctttccagccccag
tcagggaccgtgcagtccatgtgtttgctagcagtcagtccagacggaaactggctcgct
gcctcaggctccagtgccggtgtccacgtgtacaatgtgaaacagctaaagcttcactgc
acagtgcctgcttacaacttccctgtgactgctctggccatcgcacccaataccaacaac
cttgtcattgctcattctgaccagcaggtatttgagtacagcatcccagacaaacagtac
acggaatggagccggactgtccagaagcaggggtttcatcatctttggctccagagggac
actcccatcacacacatcagttttcatcccaagagaccaatgcacatcctcctccacgac
acctacatgttctgcctcatcgacaagtcactgcctcttccaaatgataaaaccttactg
tacaacccactgcctcccacaaacgaatccgatgtcatcaggaggcgcacagctcatgcc
tttaaaatttctaagaaatataagcctctgctctttgtggatctcctggatgaaaagacc
ctggtggcggtagaacggcctctggatgacatcgttgctcagctcccaccacccatcaaa
aagaagaaatttggaacctga
DBGET
integrated database retrieval system
