Bubalus kerabau (carabao): 129634162
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Entry
129634162 CDS
T11435
Symbol
MEX3B
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bke03019
]
129634162 (MEX3B)
04121 Ubiquitin system [BR:
bke04121
]
129634162 (MEX3B)
Enzymes [BR:
bke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129634162 (MEX3B)
Messenger RNA biogenesis [BR:
bke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
129634162 (MEX3B)
Ubiquitin system [BR:
bke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129634162 (MEX3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
RING_XB3-XBAT31
zf-C3HC4
KH_2
Prok-RING_4
KH_DEAH11_2nd
KH_PNO1_2nd
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
129634162
NCBI-ProteinID:
XP_055412121
LinkDB
All DBs
Position
19:complement(24534049..24538616)
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AA seq
584 aa
AA seq
DB search
MPSSLFADLERNGSGGGGGGGGGGGGGGGGETLDDQRALQLALDQLSLLGLDSDEGASLY
DSEPRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTG
RKEDVAMARREIISAAEHFSMIRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLV
VGPKGATIKRIQQQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGIIEL
TDENDFHANGTDVGFDLHHGSGGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSA
STDSYFGAGTSGSAAATPRLADYSPPSPALSFAHNGNNNNGNGYTYAAAAAAAGEASVPS
PDGCPELPPAFDPAPAPPPGAPLLWAQFERSPGGGPAAPASSSCSSSASSSAASSSSVVF
PGGGASAPSSANLGLPVHRRLHPGASCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAY
AAYANGLGAQLPAGLQPSSSDASGSSSSSSSSSSSSSSSSSSSGLRRKGSRDCSVCFESE
VIAALVPCGHNLFCMECANRICEKSEPECPVCHTAVTQAIRIFS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctgtttgcagacctggagcgcaacggcagcggcggcggagggggcggc
ggcggcggaggaggaggaggaggcggcggagagaccctggatgaccaaagagccctgcag
ctcgcactcgaccagctttccctgctagggctggacagtgacgagggcgcgtctctgtac
gacagcgagccgcgaaagaagagcgtgaacatgaccgagtgcgtgccggtgcccagttcc
gagcatgtcgccgagatcgtggggcggcaaggttgtaaaatcaaagctctgcgggcaaag
accaacacttatatcaagaccccggttcgcggggaggagcctgtctttgttgtgacgggc
aggaaggaggatgtggccatggcccggagggagatcatctccgccgccgagcacttctcc
atgatccgcgcctcgcgcaataagaacacggcgctgaacggcgcagtgcctgggccgcct
aacctgccagggcagaccaccatccaggtgcgcgtgccctatcgcgtggtggggctcgtg
gtggggcccaaaggcgccacgatcaagcgcatccagcagcagacgcacacatacatcgtg
acgcccagccgcgacaaggagccggtgttcgaggtgacgggcatgccggagaacgtggac
cgcgcccgcgaggagatcgaggcccacatcgccctgcgcaccggcggcatcattgagctc
accgacgagaacgatttccatgccaacggcacggatgtgggcttcgatctgcatcatggg
tccggcgggtccggcccaggcagcctctggagcaagcccacccccagcatcacgcccact
ccgggccgcaagcccttctccagctaccgcaacgacagctccagctcgctcggcagcgcc
tccacagactcttacttcggcgcgggcaccagcggcagcgcagccgccaccccgcgcctg
gcggactacagccccccaagcccagcgctcagctttgctcacaacggaaacaacaacaac
ggcaatggatacacctacgcggcggcggcggcggcggcgggggaagcttcggtgccttcc
cctgacggctgccccgagcttccgcccgcctttgacccggctcccgctccaccgcccggg
gcgccccttctctgggcccagttcgagcggtccccgggaggcggacctgcagctcccgcg
tcctcttcctgctcctcctcggcatcttcgtccgctgcttcgtcctcctcggtggtcttt
cccgggggcggagccagcgcgccctccagcgccaacctggggctgccggtgcaccgccgg
ctgcatccaggcgccagctgcccgcgcctgtccccgcccttgcacatggccccgggggcg
ggcgagcaccacctggctcgtcgtgtgcgcagcgacccaggcggagggggcctggcctac
gccgcctatgccaatgggctgggggcgcagctgccggcgggccttcagccttcgtcgtcg
gacgcgtccggctcctcgtcctcgtccagctcgtcctccagctcgtcctcttcctcctcc
tcctcctccgggttgcggcgtaagggcagccgcgattgctccgtgtgctttgagagcgaa
gtcatcgccgcactggtgccctgcggccacaacctcttctgcatggagtgcgctaaccgc
atctgcgagaaaagcgagcccgagtgcccggtctgccacaccgcggtcactcaggccatc
cgcatcttttcctga
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