Bubalus kerabau (carabao): 129635489
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Entry
129635489 CDS
T11435
Symbol
DCP1A
Name
(RefSeq) mRNA-decapping enzyme 1A isoform X1
KO
K12610
mRNA-decapping enzyme 1A [EC:3.-.-.-]
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
129635489 (DCP1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bke03019
]
129635489 (DCP1A)
03036 Chromosome and associated proteins [BR:
bke03036
]
129635489 (DCP1A)
Messenger RNA biogenesis [BR:
bke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129635489 (DCP1A)
mRNA degradation factors
5'-3' decay
Decapping complex
129635489 (DCP1A)
Chromosome and associated proteins [BR:
bke03036
]
Eukaryotic type
Gene silencing
piRNA pathway
129635489 (DCP1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129635489
NCBI-ProteinID:
XP_055414542
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Position
20:49406638..49450740
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AA seq
579 aa
AA seq
DB search
MESLSRAGQEMSLAALKQHDPYITSIADLTGQVALYTFCPKANQWEKTDIEGTLFVYRRS
ASPYHGFTIVNRLNMHNLVEPVNKDLEFQLHEPFLLYRNASLSIYSIWFYDKNDCHRIAK
LMADVVEEETRRSQQAARDKQSPSQANGCSDHRPIDILEMLSRAKDEYERNQMGDSNISS
PGLQPSTQISNLGSTETLEETPSGLQDKSAPSGHKHLTVEELFGTSLSKEQPTVVGLDSE
EVEKLPGDASQKEPNSFLPFSFEPGGAPQSENLGVHPAAHPSVQPEVTTPVLITPASITQ
SSEKQAPSYAIPLHSVLSPSLQAEASTGQAPPSLPRKTTMMQTVKTATRQRSPLLSQPVP
ELSHASLTASQSPFRAPLSVTNTTSPSLPSVDLLQKLRLTPQHDQIQTQSLGKGAAAPSF
SPAAGQLATPESFIEPSPKATAARASASLSNMVLAPLQSMQQNQDPEVFAQPKVLSSAIP
VAGPPLVPATTSAAPSVLLSPSVFQQTVTRSSDLERKASSPSPLTVGTTENQRKPSIILS
KSQLQDTLIHLIKNDSSFLSTLHEVYLQVLTKNRDNHNL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgctgagtcgagctgggcaagagatgagcctagcggccctgaagcaacacgac
ccctacatcaccagcatcgcagacctcacgggccaggtcgcactgtacaccttctgcccc
aaggccaaccagtgggagaagaccgatatagaagggaccttatttgtatatcgaaggtca
gcttcaccttaccatggtttcaccattgtgaatcgactgaatatgcacaatctagttgaa
ccagtaaataaagatttggaatttcagctccacgaaccatttcttctgtatagaaatgca
agtttgtcgatatacagtatctggttttatgacaagaatgactgtcaccgcatagccaaa
ctcatggccgatgtggtagaagaggagacacggcggtcccagcaagcagctcgggataag
cagagtcccagccaggccaatggctgcagtgaccacaggcccattgacatcctggagatg
ctaagcagagccaaggatgagtacgagaggaatcagatgggcgactcaaatatctccagc
cctgggctgcagccaagtactcagatctccaatctgggaagcactgagacgctagaagag
acaccatctgggttgcaagataagtctgctccatctggacacaaacatctgacagtggaa
gaattatttggaacctctttgtcaaaggaacagccaacagttgtgggtctggattcagaa
gaagtggagaagctgccaggagatgcctcccagaaagagcccaactcattcctaccattt
tcctttgagcctggtggggcgccccagtcggaaaacctgggtgtccatcctgctgcccac
ccctcagtccagcccgaagtcaccaccccggtgctaatcactcctgcttccatcactcag
tccagtgaaaagcaggcccccagctatgccatcccattgcactctgtgctcagtcccagt
ctacaagcagaagcttctactggacaggctccccccagcctaccccgaaaaaccaccatg
atgcaaacagtgaagaccgcgactaggcagaggtctccactcctgagtcagcctgtccct
gagctgagccacgccagcctgactgccagccagagcccattcagggccccgctgagcgtg
acaaacacaaccagtccgtctctcccaagtgttgatcttctccagaaactcaggttgacc
ccgcagcatgaccaaatacagacacagtcacttgggaaaggtgcagcggcacccagcttt
tctccagcagccggccagctggccacgcctgagagcttcatagagccttcccctaaagcg
acagcagcgagagcctcagcctccctgagcaacatggtgcttgctccccttcagtctatg
cagcaaaaccaggatcctgaagtttttgcccagcctaaggtgttatccagtgccatcccg
gtggcaggcccccctctggttcccgcaacaacctcggcagcaccctcagtcctgctgtcc
cccagtgttttccagcagacagttacaaggtcctcagaccttgagaggaaagccagctcc
ccttctcctctcaccgtcgggacgacagaaaatcagagaaagccttccatcatcctcagc
aagtctcagctccaggatacattaatacatctaatcaagaatgattccagcttcctcagc
acacttcatgaagtctacctacaggttctgaccaagaacagagacaaccacaacctatga
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