Bubalus kerabau (carabao): 129635609
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Entry
129635609 CDS
T11435
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03040
Spliceosome
bke05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129635609
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
129635609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bke03019
]
129635609
03041 Spliceosome [BR:
bke03041
]
129635609
Messenger RNA biogenesis [BR:
bke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
129635609
mRNA cycle factors
Common to processing body (P body) and stress granule
129635609
Spliceosome [BR:
bke03041
]
Common components
Common spliceosomal components
hnRNP proteins
129635609
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
129635609
NCBI-ProteinID:
XP_055414810
LinkDB
All DBs
Position
20:8408195..8410127
Genome browser
AA seq
373 aa
AA seq
DB search
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFV
TYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEIIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMASASSSQRGRSGSGNFGGGRGGGFGGNDNFGRGGNFSGRGGLGGSRGGGGYGGS
GDGYNGFGNDGGYGGGGPGYSGGSRGYGSGGQGYGNQGSGYGGSGSYDSYNNGGGGGGFG
GGSGSNFGGGGSYNDFGNYNNQSSNFGPMKGGNFGGRSSGPYGGGGQYFAKPRNQGGYGG
SSSSSSYGSGRRF
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaatcagagtctcccaaagagcccgaacagctgcggaagctcttcatcggagga
ttgagctttgaaacaaccgatgagagtctgaggagccattttgagcaatggggaacgctc
acagactgtgtggtaatgagggatccaaacaccaagcgctccagaggcttcgggtttgtc
acatacgccacggtggaggaggtggatgcggccatgaatgcaaggccacacaaggtggac
ggaagagttgtggaaccaaagagggccgtctcaagagaagattctcaaagacctggtgcc
cacttaactgtgaaaaagatttttgttggtggcattaaagaagacactgaagaacatcac
ctgagagattattttgaacagtacgggaaaattgaaataattgaaatcatgactgaccga
ggcagtggcaaaaagagaggctttgcttttgtaacctttgatgaccatgactccgtagac
aagattgtcattcagaaataccacactgtgaatggccacaactgtgaagtgagaaaagcc
ctgtctaagcaagagatggccagtgcttcatccagccagagaggtcgaagtggttctggg
aactttggtggcggtcgtggaggtggttttggtgggaatgacaactttggtcgtggagga
aacttcagtggtcgaggtggcttaggtggcagccgtggtggtggcggatatggtggcagt
ggggatggatataatggatttggtaatgacggtggttatggaggaggcggccctggttac
tctggaggaagcagaggctatggaagtggtggacagggttatggaaaccagggcagtggc
tatggcgggagtggcagctatgacagctataacaacggtggaggcggaggcggctttggc
ggtggtagtggaagcaattttggaggtggcggaagctacaatgattttggcaattacaac
aatcaatcttcaaattttggacccatgaaaggaggaaactttggaggcagaagttctggc
ccctatggtggtggaggccaatactttgccaaaccacgaaaccaaggtggctatggtggc
tccagcagcagcagtagctatggcagtggcagaaggttttaa
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