Bubalus kerabau (carabao): 129635812
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Entry
129635812 CDS
T11435
Symbol
DSC1
Name
(RefSeq) desmocollin-1
KO
K07600
desmocollin 1
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
129635812 (DSC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bke04515
]
129635812 (DSC1)
Cell adhesion molecules [BR:
bke04515
]
Cadherins
Major cadherins
129635812 (DSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_FAT4_N
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Fibulin_C
UPF0114
Motif
Other DBs
NCBI-GeneID:
129635812
NCBI-ProteinID:
XP_055414971
LinkDB
All DBs
Position
21:29096050..29127149
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AA seq
784 aa
AA seq
DB search
MAFPQVTVPKRHMKDTVLRRSKRRWAPIPCSLMENSLGPFPQHVQQVQSDAAQNYTIFYS
ISGPGVDKEPFNLFFIEKDTGDIFCTRSIDREQYQEFPIYAYATTADGYAPEYPLPLVFK
VEDDNDNAPYFENKLTVFTVPENCRTGTSVGKVTAIDLDEPDTLHTRLKYKILQQIPNNP
RHFTVHPDTGVITTTTPLLDREKCDTYKLIMEVRDMGGQPFGLFNTGTITISLEDENDNA
PYFTETSYTVEVEENRIDVEILRMAVHDHDLPNTPHSRAVYQILQGNENGTFKISTDPNT
NEAVLCVVKPLNYEVNRQVVLQIGVLNEAQFAKAVSSKTTTTMCTTAVTVKVKDHDEGPE
CQPPVKVIQSEDCLPAGTELLGYKAVDPERGTGEGLRYKKIQDEDNWFEVNEYTGDLKTV
KVLDRESTFVKNNQYNVSVIAFDADGRSCTGTLVVLLEDKNDHPPQIKEEELTICRHDKD
YVVLEPTDQDGPDNGPPFQFILDNSASKLWTVETRDGKTAILRGRQDLDYDYYTVPIQIK
DRHGASATHMLSVRVCDCTIPSECRMPDKLTRDAPLANVFLGKWAILAMVLGSVLLLCIL
FTCFCVTVKKTVKKCFPEDVAQQNLIVSNTEGPGEEVMDANIRLPTQTSNVCDTSISVGT
LGGQGVKTQQSFEMVKGGYTLDANKGGGHQTLESVKGVTDTGRYMYSDWHNFTQPRLGEK
VYLCGQDEEHKLCEDYVRSYNYEGKGSVAGSVGCCSDRQEEEGLDFLDHLEPKFRTLAKT
CVKK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggctttccctcaagtgactgttcctaagagacatatgaaagacacagtcctcaggcga
agcaagaggcgatgggcgcctattccgtgttcattgatggagaactcactaggtccattt
ccacagcatgtgcagcaggttcagtctgatgctgcacaaaactacaccatcttttactcc
ataagtggaccaggggtagacaaagagcccttcaatctgttcttcatagaaaaagataca
ggggatatattttgtacaagaagcatagaccgtgagcaatatcaagagtttccgatctat
gcctatgcgaccactgcagatggttatgcacctgagtatccacttcccctagtattcaaa
gttgaagatgacaatgataatgccccatattttgaaaacaaactgaccgtctttactgtg
cctgagaattgccgaactggaacgtcagtgggaaaagtgactgcaatagacctcgatgag
cctgacactctacatactcgtctgaaatacaaaatcttgcagcaaattccaaacaatcca
agacatttcactgtacatccagacacaggtgtcatcaccacaactacacctttactggat
agagaaaaatgtgatacgtacaagttaataatggaagttcgagacatggggggccaacct
tttggcttatttaatacaggaacaattactatttctctagaggatgaaaatgataatgca
ccatattttacagaaacttcttatactgtagaagtagaagaaaacagaattgatgttgaa
attttacgaatggcggtgcatgaccatgatttgccaaacacgccgcactcgagggctgtg
taccagatcctacagggaaatgaaaatggaaccttcaaaattagtacagacccaaataca
aatgaagcggtcttgtgtgttgtcaagccactgaactatgaagtcaatcgccaagttgtt
ttgcaaattggcgtacttaacgaagcgcagttcgctaaagcagtaagctcaaaaactact
acgactatgtgtactactgctgtcactgttaaagttaaagaccatgatgagggccctgaa
tgccaaccaccagtaaaagtcattcagagtgaagactgcctccccgcaggcacagaactc
cttggatacaaagcagtggacccggaaaggggcactggcgagggcttaaggtataagaag
atacaagatgaagataactggtttgaagttaatgaatacactggtgacttgaaaactgta
aaagtgctagatagagaatcaacatttgtaaaaaacaaccaatacaatgtttctgtgatt
gcgttcgatgcagatggcagatcttgcactggaacgttagtagttcttttggaagataaa
aatgaccacccaccgcagataaaagaagaagaactgacaatttgccggcatgataaggat
tatgttgtcctcgaacctacagatcaagatggacctgacaatgggccaccttttcaattc
attcttgataattctgccagcaaactttggacagtagagacaagggatggtaaaactgcc
attcttcgggggcggcaagatcttgattatgactattacactgttcctatccaaataaaa
gacagacatggcgcttctgcaacacacatgttatcagtgagagtatgtgattgtacaatt
ccatccgaatgtcgaatgcctgataaacttacgagagatgcgccactcgcaaatgtattc
cttggaaaatgggcaattcttgccatggtgttgggttctgtattgttgttatgtattttg
ttcacatgtttctgtgttactgttaagaaaacagtaaagaagtgttttccagaagatgta
gcccagcaaaatttaattgtatcaaatactgaaggacctggagaagaagtgatggatgca
aatattagactccccacacagacatccaacgtttgtgacacaagcatatctgttggcacc
cttggtggccagggagtcaaaacacagcaaagttttgagatggtcaaaggcggctacact
ttggatgccaacaaaggaggcggacatcagaccctggaatctgttaagggagtgacggac
actggcagatacatgtacagtgactggcacaacttcacccaacctcggcttggcgaaaag
gtgtatctgtgcggacaagacgaggaacacaagctctgcgaagactatgttcgctcctat
aactatgaagggaaagggtctgtggccggctccgtgggctgctgcagcgatcggcaggaa
gaagaggggcttgacttcctagatcatctggaacccaaatttaggacgctagcgaaaaca
tgcgtaaagaaataa
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