Bubalus kerabau (carabao): 129636905
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Entry
129636905 CDS
T11435
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bke03000
]
129636905 (SOX30)
Transcription factors [BR:
bke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129636905 (SOX30)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
129636905
NCBI-ProteinID:
XP_055416637
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Position
1:complement(238681104..238724372)
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AA seq
766 aa
AA seq
DB search
MERARPEQPPQQRQLPRATPSRPLHPAAPPLPVEGASFRAAVTEPSPSPPTPWAAAIATV
ASSCGEPSASGVQPAARRLLQVKPEQVLLLPPGPPLPQAREEGAATSPAQARLLQLRSEL
LLLPPPPPASEGIPCRPELHPLQPRALHVKAEKQEPGPGLDLLAGPRRAVEACPKTSRRV
KAEGSGPLNSRRGEEKKGKLEAEEIVSYAAKGEEGKSLAVLREGVIKTEAPERLREDCRL
STEPASNGLAHGSKDVILTQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIRL
TKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFMV
WARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWVY
QPRPGKRKRFPLSVSSVFSGTTQNIISTNPTIYPYRSPTYSVVIPSLQNAITHPVGESPP
TIQLPTPAVQRPSPITLFQPTVSSTAQVAVQAPSLPLRPALPPQRFAGPSQADTHQLHSG
VNRSVKRPTPVSLENTNRIPTSASPAHSRFATSTIQPPKEYPSVSTCPRNTPISQAPPIP
HSHVFQPPPLGHPAALFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSMPE
CLGYYEDRYQKHEAMFSALNRDYPFRDYPDERAHNDDSRSCENMDGTSYYNSHCHSGEEY
LNPMPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagcagccgcctcagcagcgccaactgccgcgggcgaccccg
tcgcgcccgctgcaccctgctgcgcccccgctgcccgtcgagggcgcctccttccgggca
gcggtcacggagccctctccgtcgccgcccaccccgtgggcggccgccattgcgaccgtc
gcctcgtcgtgtggggaaccctctgcgtcgggcgtacagccagcggcacgacggctgctg
caggtgaagccggagcaggtgttactgctgccacccgggccaccactgcctcaggcccgg
gaggaaggcgccgccacctctcccgcgcaggcgcggctgctgcagctgaggtccgagctg
ctcctgctgccgccgccgccccccgcatctgagggcatcccctgcaggcctgagttgcac
ccgttgcagccccgagcgctgcacgttaaggcggagaagcaggagccgggacccggcttg
gatctgttggctgggcctcggagggccgtcgaggcgtgccctaaaacctccaggagggtg
aaggcagaaggctctgggcccctcaacagccgccgaggggaggagaagaagggcaagttg
gaggcagaggagatagtaagctacgcagcaaaaggcgaagaaggcaaaagcctggcagtc
ctcagagaaggagtcatcaaaacggaggcgcctgagagacttcgagaggactgcaggctc
agtacagagcccgcgtccaatggcctggcccatggcagcaaggatgtcatcctgacccag
ccgtccagtgcctttgggccacatcagcaagacctcaggatccctttaactcttcacacc
gtaccccctggggcccggatccagtttcagggacctccaccttcagagctgatacgattg
accaaggtcccgttgacaccagtgcctattaaaatgcagtccttactggagccttctgta
aaaattgaaaccaaagatgtcccgctcacggtgcttccctcagatgcaggaataccagat
actcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatggtt
tgggcaaggatccaccggccagcactagccaaagctaacccagcagccaacaatgcagaa
atcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaaaagaaaccctat
tatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttgggtttat
caacctcgtccagggaagcgaaaacgcttccctctaagcgtttctagtgtattttctggt
accacacagaatatcatctctacaaatccaacaatttatccttatcgctcacctacctac
tctgtggtaattcccagcctacagaacgccatcactcatccagttggtgaatctccaccg
accatccagctgcccacacctgcagtccagcgtccaagccccatcacacttttccagccc
accgtctccagtactgcccaggtggctgtccaggctccaagtctgcccctccgtccagca
ctcccaccccagcgctttgctgggccctcccaagcggacactcatcagctgcattctgga
gtcaatcgctctgtgaagagacccactcctgtttctctggagaacaccaacaggattccg
actagtgcaagtcctgcccattccagatttgcaacctcaaccatccaacctcccaaggag
tatcccagcgtttctacttgtcccagaaatactccaatttcccaggctcctcctattcca
cactcacacgtcttccagccccctccccttggccatccagctgcattgtttgggacacca
ccaagattctcttttcatcacccttacttcctacctggacctcactacttcccatcaagc
acgtgcccttatagtcggccgccttttggctatggaaattttccaagttcaatgccagaa
tgcctcggttattatgaagacaggtaccaaaaacatgaggctatgttttcagctttaaat
agagactatccttttagagactacccagatgaacgtgctcacaatgatgattctcgaagt
tgtgagaacatggatgggacttcttactataacagtcattgccacagtggggaagaatac
ttaaatcccatgcctcagctggacattggagccttggagaatgtcttcacagccccgaca
tcaactccttctagtatccagcaagtcaatgtcactgacagtgatgaggaggaagaagaa
aaagtgctcaggaatttataa
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