Bubalus kerabau (carabao): 129637232
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Entry
129637232 CDS
T11435
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bke01002
]
129637232 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bke04121
]
129637232 (USP42)
Enzymes [BR:
bke01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
129637232 (USP42)
Peptidases and inhibitors [BR:
bke01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
129637232 (USP42)
Ubiquitin system [BR:
bke04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
129637232 (USP42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
129637232
NCBI-ProteinID:
XP_055417157
LinkDB
All DBs
Position
23:39109587..39154622
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AA seq
1325 aa
AA seq
DB search
MTIVDKASESSDPSTYQNQTGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGA
VVYSSSSVPEKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQTHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
LTHSAHSPGQSSPRPVISQRVVNSKQAASGFIGPQLPSHMVKNPPHLNGTGPLKETPSSP
MSGPSGNSSVSRTGPVSASPSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQSQSN
LHSNSLEHPNKPAPSSTITTSSAIQSTSSAPTPPASSKVPKQMAPREACSRPMMNGRPRL
SAGVLVPYGAESSEESDEEAKGLGQENGRGLTESACSPTPDAEDGDASPHELREPVALNG
ATGPDSDLTENGLPSDRAPCPGQPALHSEHPFPKANGLPGKLIPAPLPPLPEDKILETFK
LSSKAKGSAEETRTPGSEERPLEHPEAELEASCSPPGDAQDNLESVSNLSSKFKKASPPS
DPSIKPTKEVVSERVSAEPEEAVPSVSTFCNPDKDALGDDQLLAPCDPGSLTDDQSKPSP
DVGGTLPERPQDPVAAEAAGRLSPGPSVPSEGDREPEPLGHSGRDRGSDAEGSAKSTGVS
TDEAPSPQLDTITENRPEGPPERSSIERGEDSKAGQKASEPCLVQEKVSSLRKVDRGHYR
SRRDRSSSGEHARESRNRTEVQHRRKRPHREHERPRPERPRPEPCTLAPQPPCPSSLARS
GHHHSRSRGAPDQEWGRYHHPEGEHAWTREKYYPDRLRWERCRYHHDRSPLYPSREPRDW
RPFHAEREYERAGPYGGRPYKDHYRGRKGYELVAKERDRHRFSSPRAGMAHAPPPHPAAK
YTHDRLSFGAEDGSCDLAARFHEHDNIKSRKRRYDSLENERHVEKKAWRSLQKDPVEEPK
VKKHKKSKKKKKSKDKHRDRDSRHQQDSDLSVAHSDADLHRHKKKKKKKKRHSRKSEDFG
RDSEPRLPKAASCETVDHFRRAEGAFPLADGLPLEGAAPFCEKTKHFRMESREVRCRLSE
CGQGD
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagacccatcaacctatcagaaccagact
ggcagttctgaggctgtctcacctggagacatggatgcaggttctgccagctggggtgct
gtgtcttcgttaaatgatgtttcaaatcacacactttctttaggaccagtacctggtgct
gtagtttattcaagttcatctgtacctgaaaaatcaaaaccatcaccacaaaaggatcaa
gccctaggtgatggcattgctcctccacaaaaagttctcttcccgtctgagaagatctgt
cttaagtggcagcagactcatagagtaggagctgggctccagaatttgggcaatacctgt
tttgcaaacgcagcactgcagtgtttaacttacacgccacctctcgccaactacatgcta
tcacacgagcactccaagacatgtcatgcagaaggattttgcatgatgtgtacaatgcaa
gcacatatcacccaggcactcagtaatcctggggatgttattaaaccgatgtttgtcatt
aatgagatgcggcgcatagccaggcacttccgctttggaaaccaagaagacgcccacgaa
ttccttcagtacactgttgatgctatgcaaaaagcatgcttgaacggcagcaataaattg
gacagacacacccaggccaccacactcgtctgtcagatatttggaggctacctaagatct
agagtcaaatgtttaaattgcaaaggtgtttcagatacttttgatccctatcttgatata
actttggagataaaggctgctcagagtgtcaacaaggccttggagcagtttgtaaagcca
gaacagctcgacggagaaaactcatacaagtgcagcaagtgtaaaaagatggttccagct
tcaaagagattcactatacatagatcttctaatgttcttacgctttctctgaaacgtttt
gcaaattttactggtggaaaaattgctaaggatgtgaaataccctgagtatcttgatatt
cgaccgtacatgtctcaaccaaacggagagccgatcatttatgttttgtatgcagtcctg
gtacacactggttttaattgccatgctggccattacttctgctacataaaagctagcaac
ggcctctggtaccaaatgaacgactccatcgtgtctaccagtgatatcagatcggtactc
agccagcaagcttacgtcctcttttatatcaggtcccacgatgtgaaaaacggaggtgaa
cttactcattccgcccacagccctggccagtcctcgccccgcccggtcatcagtcagcgg
gttgtcaacagcaaacaggcagcctcaggattcattggcccacagctcccctcgcacatg
gtgaagaacccccctcacctgaacgggacgggaccactgaaggagacgccgagcagcccc
atgtcaggccccagtgggaactccagcgtcagcaggactggtcctgtgagcgcctccccg
tctgttcagaactggtcagttaacaggccctcagttattccagaacaccccaagaaacag
aaaatcacgatcagtattcacaacaagttacctgtgcgccaaggtcagtctcagtctaac
cttcacagcaattctttggagcaccccaacaagcccgccccctcttctaccattaccact
tcttctgcaatacagtctacctcgagtgcccccacgccgcccgcctctagtaaggtccca
aagcagatggccccgagggaggcctgctccaggcccatgatgaacggcaggcccaggttg
agcgctggcgtgctggtcccctacggcgccgagtcctccgaggagtctgacgaggaggcc
aagggcctcggccaggagaacggccgcgggctgaccgagagcgcgtgctcccctactccg
gacgccgaagacggcgacgcctccccgcacgagctccgagagcccgtggctctaaatggt
gctactggtccagacagcgacctgacggaaaacggcctgccctcggacagggccccttgc
ccaggccagcccgcgctgcactcagaacacccctttcccaaggcaaacggcctccctggg
aagttgatacctgctcctttgccacctcttccagaagacaaaatcttagagaccttcaaa
ctcagcagcaaagccaaaggctcagcagaggagactaggacacctggctcggaggagagg
cctctggagcatccggaggcggagctggaggccagctgctcccctcccggcgacgcccag
gacaacctggagtctgtctcgaatctcagcagcaaattcaagaaggcttcgccgccctcg
gaccccagcatcaaacctaccaaagaagtcgtctctgaacgtgtttcggcagaacccgag
gaggctgtgccgagtgtcagcaccttttgtaaccccgacaaggacgccctcggggacgat
cagcttttggcaccctgtgaccctgggagtttaacagacgatcagagcaaaccgtccccg
gacgtgggagggacgttaccagagcggccccaggacccggtggccgcggaagccgcaggg
aggctgagcccgggtccctctgtgccttccgagggcgaccgtgagcccgagcccttgggt
cacagcggtcgggacagaggctcggatgcggagggttctgctaagagcacgggggtgtcc
acagatgaggcgccctctccgcagctagacacgatcacagaaaaccgtcctgaggggccc
ccagagcgcagcagcattgagagaggggaagacagtaaggccgggcagaaggcctcggag
ccatgtctggtccaggagaaggtcagcagcctcagaaaggtcgaccgaggacattaccgc
agccgaagggaccgctcgtccagtggcgagcatgcacgggagagccggaacaggaccgag
gtgcagcatcggcggaagcggccccaccgggagcacgagcggccgcggcctgagcggccc
cggccggagccctgcaccctggccccgcagcccccctgccccagctccctggccaggtca
ggccaccaccactcccggagcagaggcgccccggaccaggagtggggccgctaccaccac
cccgagggcgagcacgcctggacccgggagaagtactacccggacaggctgcgctgggag
cgctgccggtaccatcacgacaggtcccccctgtatcccagccgggagccccgggactgg
cggcccttccacgccgagcgcgagtacgagcgggccgggccctatggtggccggccttac
aaggaccactacagaggccgcaagggctacgagctggtggccaaagagagggaccggcac
cgcttcagcagcccccgggcgggcatggcccacgcgccccctccacaccccgccgccaag
tacacccacgacaggctcagcttcggggctgaagatggcagctgcgacctggccgctcgg
tttcacgaacacgacaacattaagtcacggaaacggagatacgatagcctcgagaatgag
aggcacgtagaaaagaaagcctggagaagcttacagaaggaccctgtagaggagcccaaa
gtgaagaagcacaaaaagtcgaagaagaagaagaaatccaaagacaaacaccgggaccga
gactccaggcatcagcaggattcagacctttccgtagcgcactctgacgctgacctccac
agacacaagaagaagaagaagaaaaagaagagacactcgaggaaatcagaggactttggg
cgagattcagaaccacgcttgcccaaggcagccagctgtgagactgtggaccatttccgg
agagccgagggcgccttccccctagcagacggcctgccgctggagggcgcggcacccttc
tgtgagaaaaccaaacacttcaggatggagagccgggaggtcaggtgtcgtctgtccgag
tgcggccagggtgattga
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