Bubalus kerabau (carabao): 129637331
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Entry
129637331 CDS
T11435
Symbol
PAPOLB
Name
(RefSeq) poly(A) polymerase beta
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
129637331 (PAPOLB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bke03019
]
129637331 (PAPOLB)
Enzymes [BR:
bke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
129637331 (PAPOLB)
Messenger RNA biogenesis [BR:
bke03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
129637331 (PAPOLB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
129637331
NCBI-ProteinID:
XP_055417378
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All DBs
Position
23:40170050..40176730
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AA seq
642 aa
AA seq
DB search
MMPFPVTTLGPQRTPPLPKHYGISSPISLAPPRETDCILTQKLIETLKPFGVFEEEEELQ
RRILILEKLNNLVKEWIREISESKSLPQAVIENVGGKIFTFGSYRLGVHTKGADIDALCV
APRHVDRSDFFTSFYDKLKLHEEVKDLRAVEEAFVPVIKLCFDGIEIDILFARLALQTIP
EDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHLVPNIDNFRLTLRAIKLWAKCHNIYSN
ILGFLGGVSWAMLVARTCQLYPNAIASTLVRKFFLVFSEWEWPNPVLLKEPEERNLNLPV
WDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVSTRMVMIEEFKQGLAITHEILLSKAEWS
RLFEAPSFFQKYKHYIVLLASAPTEKQHLEWVGLVESKIRILVGSLEKNEFITLAHVNPQ
SFPAPKESPDKEEFRTMWVIGLVLKKPENSEVLSIDLTYDIQSFTDTVYRQAINSKMFEM
DMKIAAMHLKRKELHQLLPNHVLQKKKTLSTEGVRLTALDDGSLDLSVNGENSTPVSSLP
AASKTGPVTGSTQGRNSPAPAATAASVTGVQLSEVSLQQANPSDSPGGASSESIPQTAPQ
PAVPPAPKPMVTRVVSSTRLVSHPPRPSGSAATSIANPIVGV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgatgccgtttccggtgaccaccctgggaccacagcggaccccgccgctgcccaagcac
tacggcatctcttcccccatcagtttagcaccccccagggagactgactgcatacttacc
cagaaattaattgaaactctgaagcccttcggggtttttgaagaggaagaggaactgcag
cgcaggattttaattttggagaaattaaataatctggtaaaggaatggatacgagaaatc
agtgaaagcaagagtcttccacaagctgtaattgaaaatgttggagggaaaatctttaca
tttggttcttacaggttaggggtgcatacgaaaggtgcagatatcgatgcgttgtgcgtg
gcaccgagacacgttgatcgaagcgactttttcacctccttctatgataaattgaaacta
catgaagaagtaaaggatttaagggctgttgaggaggcatttgtaccagttatcaaactg
tgtttcgatgggatagagattgatattttgtttgcaagattagcactgcagactattcct
gaagatttggacctaagagatgacagtctgcttaaaaacttagatataagatgcataaga
agccttaatggttgccgggtaactgatgagattttacatctagtaccaaacattgacaac
ttcagattaactctgagagccatcaagctgtgggccaaatgccacaatatttattccaat
atactaggtttcctcggtggtgtttcctgggcgatgctagtagcaagaacttgccagctt
tatccaaatgccatagcatcaactcttgtccgtaaatttttcttggtgttttctgagtgg
gaatggccgaatccagtgctactgaaagagcccgaagaacggaatctgaatttgcctgtc
tgggacccaagagtaaatcccagtgataggtaccatctcatgcccataatcacaccagca
tacccccagcagaactccacctacaacgtgtctgtttcaacacggatggtcatgattgaa
gagtttaagcaagggcttgctatcacacatgagattttgctgagtaaggcagagtggtcc
agacttttcgaagcgcccagcttcttccagaagtacaagcattatattgtgcttctggca
agtgcgccaacagagaaacaacatctagagtgggtgggtttggtggaatcaaaaatccga
atcctggttggaagcttggagaagaatgaatttattacactggctcatgtgaatcctcag
tcgtttccagcacccaaggagagtcctgacaaggaagaatttcgtacaatgtgggtgatt
gggttagtgctaaaaaaaccagaaaactcggaagttctcagtattgacctcacctatgat
atccagtctttcacagacactgtgtataggcaagcgataaatagtaaaatgtttgagatg
gacatgaaaattgctgcaatgcatttgaaaagaaaggaacttcatcaactactgcctaat
catgtgcttcagaaaaagaaaacactttcgacagaaggtgtcagattgacagccttggat
gacggcagccttgacttgtctgtcaacggtgagaacagcacgcctgtgtcgtcacttcct
gccgcttcgaagactggcccagtgactggcagcactcaaggcagaaacagtcctgccccg
gcggcaacggcagcatctgtgaccggggtacagctttctgaagtttccttgcagcaagca
aatcccagcgacagcccagggggcgcatccagcgaaagcatccctcagactgctccacag
ccagctgttcctccagcaccgaagcccatggtcaccagagtcgtttcctcaacacggctg
gtcagccatccacccaggccttcagggagcgcagcaacaagcatagctaatcctatcgta
ggagtctag
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