Bubalus kerabau (carabao): 129637767
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Entry
129637767 CDS
T11435
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04612
Antigen processing and presentation
bke05145
Toxoplasmosis
bke05152
Tuberculosis
bke05164
Influenza A
bke05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
129637767 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
129637767 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
129637767 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
129637767 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
129637767 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
bke01001
]
129637767 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bke04054
]
129637767 (CIITA)
Enzymes [BR:
bke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
129637767 (CIITA)
Protein kinases [BR:
bke01001
]
Serine/threonine kinases: Other
TAF1 family
129637767 (CIITA)
Pattern recognition receptors [BR:
bke04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129637767 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129637767
NCBI-ProteinID:
XP_055418011
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Position
23:10544272..10591330
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AA seq
1129 aa
AA seq
DB search
MRCLAPRPAGSYLPEPQGSGQCPTMELGPLEGSYLELLNSSADPLQLYHLYDRMDLTGEE
EIELCSEPDTDTINCEQFSRLLCDMEGDEETREAYANIAELDQYVFQDTQLEGLSKDIFI
EHIGLEEIISESVEVLEEAGQKSQKRPFPEELPVDLKHRKLAEPLTMPVVTGTFLVGPVS
DSLVQPCPPPPALFNTEPASSQTRLKDAAPPSSSLLSCLSLPVGPIQIIPTLPTLPQGLW
PISGTGTGVSSILIYQSEMPPASQTPPSSGPAVQSLPKSPDRPGSASPFAPSATDLPSMP
EPALTSRAGLTEDEMSPSKCPAAGGASSKLPKWPESVEQFYQSLRDKYQAQPTSPEGTLV
ETDLVRVRLEKSSGKSQERELATLDWAERQPARGGLAEVLLAASDCQQPRETRVIAVLGK
AGHGKSHWARAVSRAWAHGQLPQYDFVFCVPCHRLDRPGTSYRLQDLLSSLGPQPLPVDD
EVLSYIARRPNRILLILDGFEDLEAHDGSLHSAGGPGSAEPRSLRGLLGGLLQRKLLRGC
TLLLTAWPRGRLAQSLSKVDALFEVAGFSVQQAEAYVRRYFELEGTAEHQERAVALLQAQ
PFLLSHSHSPTVCRAVCQLAEALLQRSDGAQLPSTLTGLYVGLLGPAARDGPPGALAELA
RLAWELGRAHQRALKAGCLPSAEARAWAVAQGWLRPTPGAPETELAFSSFLLQCFLGAVW
LALSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLVGLVFQPRASCLGALAGPAAATS
ADRKQKVLTRYLKRLQPGTLQAGRLLELLHCAHEALDPGLWQHVLQGLPAHLSFLGTRLT
PPDTHVLGSALEAAGRDFSLDLRSTGVDASGLGSLVGLSCVTRFRAALSDTVELWESLQQ
RGEAKLLRAVEEKFTIEPFKAKSMKDVEDLGNLVQIQRTRSSSEAAAGELPAVRDLKKLE
FALGPVLGPQVFPKLVKILEAFTSLQHLDLDSLSENKIGDEGVAQLSATFPQLKALETLN
LSQNNITDVGACKLAEALPALAASLLRLSLYNNCICDAGAESLAHALPDMVSLRVLDVQY
NKFTAAGAQQLAAGLRKCPQVKTLAMWTPTIPFGVQEHLQQLDPRIILR
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcctggctccacgccctgccgggtcctacctgccagagccccaaggcagtgga
cagtgcccaaccatggagctggggcctctagaaggcagttacttagaacttctcaacagc
agtgctgaccctttgcagctctaccacctctacgaccggatggatctgacaggagaagaa
gaaatagagctctgctcagagcctgacacagacaccatcaactgcgaacagttcagcagg
ctgttgtgtgacatggaaggtgatgaagagaccagggaagcttatgccaatatcgcggaa
ttggaccagtacgtcttccaggacacccagctggagggcctgagcaaagacattttcatc
gagcacataggattggaagaaataatcagcgagagtgtggaggtgctggaggaagcaggg
cagaaaagtcagaaaagacccttcccagaggagctgcctgtggatctgaagcaccggaag
ctagccgagcccctcaccatgcctgtggtgactggcactttcctggtggggccagtgagc
gactccttggttcagccctgcccgccacctcctgctctgttcaacacggagccagcatcc
agccagacccggctgaaggacgcggcgcctccttccagttccttgttgagctgcctgagt
cttcctgtgggacccattcagattatccccactctccccactctgcctcaggggctctgg
ccgatctcagggactgggacgggggtctccagtatactcatctaccaaagtgagatgccc
ccagccagccaaacacccccctccagcgggcctgctgtccagagccttcccaagtcccca
gaccggcctggctccgccagcccctttgccccatctgccaccgacctccccagcatgccc
gaaccggccctgacctcccgtgcaggcctgacagaggatgagatgtcccccagcaaatgc
ccagcagctggcggggcctccagcaaacttcccaagtggcctgagagcgtggagcagttc
taccagtcactacgggacaagtaccaggcccagcccaccagcccggaaggcaccctggtg
gagacggacctggtgagggtgaggctggagaagagcagcgggaagagccaggagagagag
ctggccaccctggactgggcagagcggcagccggcccgagggggtctggccgaggtgctg
ctggctgccagcgactgccagcagccccgagagacgcgggtgatcgctgtgctgggcaaa
gcgggacacgggaagagtcactgggcacgggccgtgagccgggcctgggcccacggccag
ctgccacagtacgactttgtcttctgtgtcccctgccatcgtttggaccgtccggggacc
tcctaccgcctgcaggatctgctgtcctccctgggcccgcagccgttgccagtggacgat
gaggtcctcagttacatcgcgaggaggcccaaccgcatcctgctcatcctggatggcttc
gaggacctggaagcccacgatggctccctgcacagcgcagggggccccgggtcggcagag
ccccgctccctccgggggctgctggggggcctcctccagcgcaagctgctgcggggctgc
accctgctgctcacggcctggccccggggccgcctggcccagagcctgagcaaggtggac
gccctgtttgaggtggccggcttctcggtccagcaggctgaggcctacgtgaggcgttac
tttgagttggaggggaccgctgagcaccaagagagggccgtggcgctcctgcaggcccag
ccgttcctcctgagccacagccacagccccaccgtgtgccgggccgtgtgccagctcgca
gaggccctcctgcagcggagcgatggagcccagctgccctccacgctcacgggcctctac
gtgggcctgctaggcccagcagctcgcgacggacccccgggggccctggcggaattggcc
aggctggcctgggagctgggccgtgcgcaccagagggccctgaaggcgggctgtttaccg
tcggcagaggcgagggcctgggctgtggcccaaggctggttgcggcccaccccgggggcc
ccggagacggagctggccttttccagcttcctcctgcagtgcttcctgggggccgtgtgg
ctggctctgagcggcgaaatcaaggacaaggagctgccgcagtatctggccttgaccccg
aggaagaagcggccctatgacaactggctggagggcgtgccgcgcttcttggtgggactg
gtcttccagcctcgcgccagctgcctgggggccctggcaggcccggcggcagccacgtcg
gcggacaggaagcagaaggtgctcacgaggtacctgaagcgtctgcagcccgggacgctg
caggcggggcggctgctggagctgctgcactgtgcccacgaggcgctggaccccgggctc
tggcagcacgtgctgcaggggctccctgcccacctctccttcctgggcacacggctcacg
cctcccgacacccacgtgctgggcagcgccctggaggctgcgggccgagacttttccctg
gacctccgcagcactggcgtcgacgcctccggactggggagcctcgtgggactcagctgt
gtcacccgtttcagggctgcattgagtgacactgtggagctgtgggagtccctgcagcag
cgtggggaggccaagctactccgggcagtggaggagaagttcaccatcgagcctttcaag
gccaagtccatgaaggatgtggaagaccttggcaatctcgtgcagatccagaggacaaga
agctcctctgaagcagcagctggggagctccctgctgtccgagacttaaagaagctggag
tttgcgctgggccctgtcttgggcccacaggtttttcctaaactggtgaagatccttgag
gcctttacttcccttcagcatctggacctggactcactgagcgagaacaagattggggac
gagggtgtcgcccagctctcagccaccttccctcagctgaaggccctggagacactcaac
ttgtcccagaacaacattaccgacgtgggtgcctgcaagctggccgaggctctgcccgcg
ctggccgcgtccctcctcaggctgagcttgtacaataactgtatctgcgacgcgggagcc
gagagcctggcacacgcgcttccagacatggtgtccctccgcgtgctggacgtccagtac
aacaagttcacagccgctggggctcagcagcttgccgctggcctgagaaagtgccctcag
gtgaagacactggcgatgtggacgcccaccatcccctttggcgtccaggaacacctgcag
cagctggacccacgaatcattctgagatga
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