KEGG   Bubalus kerabau (carabao): 129638493
Entry
129638493         CDS       T11435                                 
Symbol
HCFC1
Name
(RefSeq) host cell factor 1 isoform X1
  KO
K14966  host cell factor 1
Organism
bke  Bubalus kerabau (carabao)
Pathway
bke03083  Polycomb repressive complex
bke04980  Cobalamin transport and metabolism
bke05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:bke00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    129638493 (HCFC1)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    129638493 (HCFC1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    129638493 (HCFC1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:bke01009]
    129638493 (HCFC1)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:bke03036]
    129638493 (HCFC1)
   03029 Mitochondrial biogenesis [BR:bke03029]
    129638493 (HCFC1)
Protein phosphatases and associated proteins [BR:bke01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     129638493 (HCFC1)
Chromosome and associated proteins [BR:bke03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     129638493 (HCFC1)
   HMT complexes
    COMPASS/SET1 complex
     129638493 (HCFC1)
    MLL-HCF complex
     129638493 (HCFC1)
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     129638493 (HCFC1)
Mitochondrial biogenesis [BR:bke03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    129638493 (HCFC1)
SSDB
Motif
Pfam: Kelch_HCF Kelch_KLHDC2_KLHL20_DRC7 Beta-prop_FBX42 Beta-prop_ATRN-LZTR1 Kelch_1 Kelch_2 fn3 Kelch_FKB95
Other DBs
NCBI-GeneID: 129638493
NCBI-ProteinID: XP_055418923
LinkDB
Position
X:complement(50033897..50056783)
AA seq 2037 aa
MASAVSPANSPAVLLQPRWKRVVGWSGPVPRPRHGHRAVAIKELIVVFGGGNEGIVDELH
VYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEW
KRLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYILELRP
GSGVVAWDIPITYGVLPPPRESHTAVVYTEKDNKKSKLVIYGGMSGCRLGDLWTLDIETL
TWNKPSLSGVAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLN
LDTMAWETILMDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWYLE
TEKPPPPARVQLVRANTNSLEVSWGAVATADSYLLQLQKYDIPATAATATSPTPNPVPSV
PANPPKSPAPAAAAPAVQPLTQVGITLLPQAAAAPPTTTTIQVLPTVPGSSISVPAAART
QGVPAVLKVTGPQATTGTPLVTMRPASQAGKAPVTVTSLPAGVRMVVPTQSAQGTVIGSS
PQMSGMAALAAAAAATQKIPPSSAPTVLSVPAGTTIVKTVAVTPGTTTLPATVKVASSPV
MVSNPATRMLKTAAAQVGTSVSSAANTSTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKT
ITLVKSPISVPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTGPVTQIIQTKGPLPAGT
ILKLVTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQ
AGATGVTSSAGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVLKGAPG
QPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVVKGTTGVTTLGTVTGTVSTSLAGAGGH
STSASLATPITTLGTIATLSSQVINPTAITVSAAQTTLTAAAGLTTPTITMQPVSQPTQV
TLITAPSGVEAQPVHDLPVSILASPTTEQPTATVTIADSGQGDVQPGTVTLVCSNPPCET
HETGTTNTATTTVVANLGGHPQPTQVQFVCDRQEATAALVTSTVGQPNGSVVRVCSNPPC
ETHETGTTSTATTAMSGIGGGPRRDIRLACAATTIPTVVRVSVTAGASEGAQVSIKPACQ
TRQTSATSTTMTVMATGAPCLAGPLLRPSVALEAAGRGAALLQLGPLSAQVRPGGEERSL
AGLGPLVSVGRQLEVHHTHTTNTATVARSAMSAGEPHELLGAPTLVYESSASASVTAAAL
EALLCPSATVTQVCSNPPCETHETGTTHTPTTATSGGAAGQPEGGQQPPASRPCETHQTA
STGTTMSVSLGALLPDAAPSHRTLESSLEVAVPPAVAPQAGASLLTPFPTQRVCSNPPCE
THETGTTHTATTVTSNMSSNQDTPPPAGDQGEVESTQGDSVNIASSSPITTTVSSTLTRA
VTTVTQSTPVPGPSVPKISSVTETAPGALTTEVPIPATITVTIANTETSDMPFSAVDILQ
PPEELQASPGPRQQLPPRQLLQPASAPLVGDSAEVLSASQSPELQAAVDLSSTGDPSSGQ
EPASSAVVATVVVQPPPPTQSEVDQLSLPQELMAEAQAGTTTLMVTGLTPEELAVTAAAE
AAAQAAATEEAQALAIQAVLQAAQQAVMAGTGEPMDTSEAAAAVTQAELSHLSAEGQEGQ
ATTIPIVLTQQELAALVQQQQLQEAQAQQQQHHLPTEALAPADSLNDPTIESNCLNELAG
AVPSTVGLLPPTATESLAPSNTFVAPQPVVVASPAKLQAAATLTEVANGIESLGVKPDLP
PPPSKAPVKKENQWFDVGVIKGTNVMVTHYFLPPEDAVPTDDDSGTVPDYNQLKKQELQP
GTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSG
KIIEYSVYLAIQSAQAGGETKSSTPAQLAFMRVYCGPSPSCLVQSSSLSNAHIDYTTKPA
IIFRIAARNEKGYGPATQVRWLQETSKDSSGAKPASKRPMSSPEMKSAPKKSKADGQ
NT seq 6114 nt   +upstreamnt  +downstreamnt
atggcttcggccgtgtcacccgccaactcgccagcggtgctcttgcagccccgctggaag
cgagtggtgggctggtcgggtccagtgccccggccccgccacggccaccgcgccgtggcc
atcaaggagctcatcgtggtgtttggcggcggcaacgaggggatagtggacgagctgcac
gtgtacaacacggcgaccaaccagtggttcatcccagctgtgagaggggacatccctcct
gggtgtgcagcctatggcttcgtgtgcgatgggacacgcctgctcgtgttcggagggatg
gtggaatacgggaagtacagcaacgacctctacgagctccaggcaagccggtgggaatgg
aagagactgaaagcaaagacgcccaaaaatgggccacctccgtgtcctcggcttgggcac
agcttctcccttgtgggcaacaagtgttacctgtttgggggtctggccaatgatagcgag
gaccccaagaataacattccgaggtacctgaatgatttatacatcctggaactgcggccg
ggctctggagtggtagcctgggacattcccatcacttacggtgtcctgcccccaccccga
gagtctcacactgcagtggtctacactgagaaagacaacaagaagtccaaactggtgatc
tatggagggatgagtggctgcaggctgggggacctctggaccttggatatcgagactttg
acatggaataagcccagcctcagcggggtggcacctcttcctcgaagtctccactcggcc
acgaccataggaaacaaaatgtacgtgtttggtggctgggtgcctctcgtcatggatgac
gtcaaagtggccacacacgagaaggagtggaagtgtaccaacactctggcttgtctcaac
ctggataccatggcttgggagaccatcttgatggatacgctggaagacaatattccccgg
gcccgtgccggccactgtgcggtagccatcaatacccgcctttacatttggagtgggcgt
gacggctaccgaaaggcctggaataaccaggtctgctgcaaggacctctggtacctggaa
acggagaagccgccacctccagcccgggtacagctggtgcgagccaacactaactctctg
gaggtgagctggggggccgtggcgacagccgacagttaccttctgcagctccagaaatat
gacattcctgccacggctgccactgccacctcccccacacccaatccagtcccgtctgtg
cctgccaatcctcccaagagccctgccccagcagcagccgcacctgccgtgcagccgctg
acccaagtaggcatcacgctcctgccccaggctgctgccgcgcccccgaccaccaccacc
atccaggtcttgccgacggtgcctggcagctcaatctccgtgcccgccgcagccaggact
caaggtgtcccggctgtgctgaaagtgactggtcctcaggctaccacgggaaccccgttg
gtcaccatgcgacctgccagccaggctgggaaagcccccgtgactgtgacttcccttcct
gcaggcgtgcggatggttgtgcctacacagagcgcccaggggacggtcattggcagcagc
ccacagatgagtggcatggctgcattggcagccgcggctgctgccacccagaagatccct
ccttcctcggcacccacagtcctgagtgtcccggctggcaccactatcgtcaaaactgtg
gccgtgacgccgggcaccaccacgctcccagccactgtgaaggtggcctcctcgccagtc
atggtgagcaacccagccactcgcatgctgaagactgcagctgcccaggtggggacttcc
gtctcttctgctgccaacacatctacccgtcccatcatcaccgtacacaagtccggaacc
gtgacagtggcccagcaagcccaggtggtgaccacagtggtgggtggggttaccaagacc
atcaccctggtgaagagccccatctcggtcccaggaggcagtgctctaatttccaatctg
ggcaaagtaatgtcagtggtccagaccaaaccggttcagacttcggcagtcacaggccag
gcatccacaggcccagtgactcagatcatccagaccaaaggacccttgccagccgggacc
atcctgaagctggtgacgtctgcagatggcaagcccactaccatcatcacaaccacgcag
gccagcggggcagggactaagcctaccatcctgggcatcagcagtgtgtcccccagcacc
accaagcccggcaccaccactatcattaagaccatccccatgtcagccatcatcacacag
gcgggcgccacgggcgtgactagcagtgccggcatcaagtcacccatcaccattatcacc
accaaggtgatgacttctggaactggagcccctgccaaaatcatcacggctgttcccaaa
atcgctacgggtcacgggcagcaaggagtgacccaggtggtgctgaagggcgcacctggc
cagccaggcaccatcctccgcaccgtgcctatggggggcgtccgcctggtcacccctgtt
actgtctctgctgtcaagcctgctgtcaccacactggttgtcaagggcaccacaggcgtc
acgaccctgggcacggtgacaggcaccgtctccaccagcctggccggagccgggggccat
agcaccagcgcctcactggccacgcccatcaccacgttgggcaccatcgccaccctctca
agccaggtgattaaccccactgccatcactgtgtctgcggcgcagacgacgctgacagcg
gccgctgggctcaccacacccaccataaccatgcagcctgtctcccagcctacccaggtg
actctgataacggcccccagcggggtggaggcccagcctgtgcacgacctcccagtgtcc
attctggcctcccctactacagaacagcccacggccacagtcaccatcgctgattcaggc
cagggtgatgtgcagcctggcaccgtgaccctggtttgctccaacccgccgtgcgaaacc
cacgagacgggcaccaccaatacagccaccaccaccgtcgtcgctaatctgggggggcac
ccccagcccacccaagtgcagtttgtctgcgacagacaggaggccactgctgctctcgtg
acctccacggtgggccagccgaatggcagtgttgttcgtgtctgctccaacccgccgtgt
gaaacccacgagaccggcaccaccagtacagccaccactgccatgtctggcatcggaggc
gggccgcggcgagacatccggctcgcctgcgcggccaccaccattcccaccgtggtccgg
gtcagcgtgactgccggggcgtcagagggagctcaggtttccatcaagcccgcgtgccaa
acccgtcagaccagtgcgaccagcaccaccatgactgtgatggccaccggggccccgtgc
ttggccggcccgctcctcagaccaagcgtggccctcgaggccgctggccgcggtgctgct
ctcttacagctggggccactgagtgcccaagtcaggcccggtggcgaggaaaggtccctt
gccggcctgggcccgctggtgtctgtggggcgccagctggaggtgcatcacacgcacacg
accaacacggctactgtggcccgctccgccatgagtgccggggagccccacgagctgctg
ggggcccccacacttgtgtacgagagctcagccagcgcctctgtgactgccgcggccctg
gaggcactgctgtgcccctcggccaccgtgacccaggtctgctccaaccctccgtgtgag
acccacgagacgggcaccacccacacacccaccacggccacatcaggaggggctgcaggc
cagccagagggcgggcagcagcctcctgccagccggccctgtgagacgcaccagaccgct
tccactggcacgaccatgtccgtcagcttgggtgccctgctcccggatgccgccccctcc
cacaggaccctggagtccagcctggaggtggcagtgccacccgcagtcgcccctcaggcc
ggtgcttcgttgctcactcctttcccgacgcaaagggtgtgctccaacccgccctgtgag
acgcacgagacaggcactacgcacacggccaccactgtcacctccaacatgagttccaac
caagacaccccaccgcctgccggcgaccagggagaggtggagagcacccagggcgacagt
gtgaatatcgccagttccagtcccatcacgacaacagtgtcttccacgctgacgcgggcc
gtgaccaccgtgacacagtccacgccagtcccaggcccttcggtgccgaagatctcatct
gtgactgagactgccccaggggctctgaccaccgaagtccccatcccggccacgattaca
gtgaccatagccaacacagaaacttctgacatgcccttctctgctgttgacatcctgcag
cccccagaggagctccaggcctctccagggccacgccagcagcttccaccacggcagctc
ctgcagcctgcctccgcgcccttggtgggggactccgccgaggtcctgtcagcctcccag
agccctgagctccaggccgccgtggatctgagcagtacaggggacccgtcttcgggccag
gagcctgccagctcggctgtggtggccaccgtggtggtccagccaccgccgcctacccag
tccgaagtagaccagttgtctctcccccaagagctgatggccgaggcccaggcgggcacc
accaccctcatggtgacagggctcaccccagaggagctggcagtgactgctgctgctgaa
gcggccgctcaggctgcagccacagaggaggcccaggccctggccatccaggccgtgctc
caggccgcacagcaggctgtcatggcaggcaccggggagcccatggatacttcagaggcg
gccgcggcggtgacacaggcagagctgagccacttgtcggccgagggccaggaaggccag
gcgaccactatccccatcgtgctgacgcagcaggagctggctgccctggtccagcagcag
cagctccaggaagcacaggcccagcagcagcagcaccacctgcccacggaagcgctggcc
cccgctgacagcctcaatgacccgaccatcgagagcaactgcctcaatgagctggccggg
gctgtgcccagcaccgtgggcctgctgccccccacggccactgagagcctggccccgtcc
aacacatttgtggcccctcagccggtcgttgtggccagccccgcgaagctgcaggccgcg
gccaccctgacggaagtggctaatggcattgagtccctgggtgtgaagccagacctgcca
ccgccacctagcaaagcccctgtaaagaaggagaaccagtggtttgacgtgggggtcatt
aagggtaccaatgtgatggtgacacactatttcctgccacctgaagacgctgtcccgact
gatgatgactcgggcaccgtgcccgactacaaccagctaaagaagcaggagctgcagcca
ggcactgcctataagttccgcgtcgccgggatcaatgcctgcggccgggggcccttcagt
gagatctcagcctttaaaacgtgtctgcctggcttcccgggggccccgtgtgccattaaa
atcagcaaaagtccagacggtgctcacctcacctgggagccaccctctgtgacctccggc
aagatcatcgagtattcagtgtacctggccatccagagcgcgcaggccggtggtgagacc
aagagctcgaccccggcgcagctggccttcatgcgggtgtactgcgggcccagcccctcc
tgcctcgtgcagtcctccagcctctccaacgcccacattgactacaccaccaagcccgcc
atcatcttccgcattgctgcccgcaatgagaagggctacggcccagccacccaagtcagg
tggttgcaagaaaccagtaaagacagctctggcgccaagccggccagcaagcggcccatg
tcgtctccagaaatgaaatccgcgccaaagaaatcgaaggcagacggtcagtga

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