Bubalus kerabau (carabao): 129638688
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Entry
129638688 CDS
T11435
Name
(RefSeq) long-wave-sensitive opsin 1
KO
K04251
long/medium wavelength-sensitive opsin
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
bke04030
]
129638688
G protein-coupled receptors [BR:
bke04030
]
Rhodopsin family
Vision
Opsin
129638688
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Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
7TM_GPCR_Srt
7TM_GPCR_Srsx
DUF3810
Motif
Other DBs
NCBI-GeneID:
129638688
NCBI-ProteinID:
XP_055419261
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Position
X:50196374..50209272
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AA seq
364 aa
AA seq
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MAHAWGPQRLAGGQPQANFEESTQGSIFTYTNSNSTRDPFEGPNYHIAPRWVYHLTSAWM
VFVVIASVFTNGLVLAATMRFKKLRHPLNWILVNLAIADLAETIIASTISVVNQMYGYFV
LGHPLCVVEGYTVSLCGITGLWSLAIISWERWMVVCKPFGNVRFDAKLAITGIAFSWIWA
AVWTAPPIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMITCCFIPLSVIILCYL
QVWLAIRAVAKQQKESESTQKAEKEVTRMVMVMIFAYCLCWGPYTFFACFAAAHPGYAFH
PLVAALPAYFAKSATIYNPIIYVFMNRQFRNCILQLFGKKVDDSSELSSVSKTEASSVSS
VSPA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggcccacgcatggggcccccaaaggcttgcaggtgggcagccgcaggccaactttgag
gagagcacccaggggagcatctttacctacaccaacagcaactccaccagagatcccttt
gaaggccccaattaccacatcgctcccagatgggtgtaccacctcaccagcgcctggatg
gtcttcgtggtcatcgcatctgtcttcactaatgggctcgtgctggcagccaccatgagg
ttcaagaagctccgccaccctctcaactggatcctggtcaacttggccatcgctgacctg
gcagagaccatcatcgccagcaccatcagcgttgtgaaccagatgtatggctactttgtg
ctgggccaccccttgtgtgttgtggagggctacactgtctccttgtgtgggatcaccggt
ctctggtccttggccatcatctcctgggagaggtggatggtggtctgcaagccctttggc
aacgtcagatttgatgccaagttggccatcacgggcatcgccttctcctggatctgggct
gctgtgtggacggctccgcccatctttggttggagtaggtactggccccacggcctgaag
acttcatgtggccccgatgtgttcagcggcagctcctacccaggggtgcagtcgtacatg
atcgttctcatgatcacgtgttgcttcatcccgctcagcgtcatcatcctctgctacctg
caagtgtggctggccatccgagcggtggcaaagcagcagaaagaatctgagtccacccag
aaggcagagaaggaggtaacccgcatggtgatggtgatgatcttcgcctactgtctctgc
tgggggccctacaccttctttgcctgcttcgccgctgcacaccccggctacgccttccac
cctctggtggctgccctgccagcctactttgccaaaagtgccactatctacaaccccatt
atctatgtcttcatgaaccgccagtttcgaaactgcatcttgcaactttttgggaagaag
gtggacgacagctctgaactctccagtgtttccaaaacagaggcgtcatctgtttcttcg
gtgtcacctgcatga
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