KEGG   Bubalus kerabau (carabao): 129639252
Entry
129639252         CDS       T11435                                 
Name
(RefSeq) polyadenylate-binding protein 1-like 2
  KO
K13126  polyadenylate-binding protein
Organism
bke  Bubalus kerabau (carabao)
Pathway
bke03015  mRNA surveillance pathway
bke03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bke00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    129639252
  09123 Folding, sorting and degradation
   03018 RNA degradation
    129639252
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bke03019]
    129639252
   03041 Spliceosome [BR:bke03041]
    129639252
Messenger RNA biogenesis [BR:bke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     129639252
   mRNA cycle factors
    Stress granule specific factors
     129639252
Spliceosome [BR:bke03041]
 Complex C
  Other components
   Complex C specific factors
    129639252
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_Nup35 RRM_7 RBD_RDR6 SET_assoc
Other DBs
NCBI-GeneID: 129639252
NCBI-ProteinID: XP_055420278
LinkDB
Position
X:92269477..92270185
AA seq 200 aa
MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL
ETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCK
VACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAERGAWARQ
STSADVKDFEEDTDEEATFR
NT seq 603 nt   +upstreamnt  +downstreamnt
atggcctcgctgtacgtgggcgacctgcaccctgaggtgacggaggcaatgctgtatgag
aagttcagcccggccgggcccatcctctccatccgcatttgcagggacaagatcacccgc
cgctcgttgggctatgcgtatgtcaactaccagcaaccggtggacgccaagcgggccctg
gagaccctgaactttgatgtcatcaagggcaggccggtgcgcatcatgtggtcccagcgg
gacccctcgctccgcaagagcggagtgggcaacgtcttcatcaagaacctgggcaagacc
atcgacaacaaggctctatacaacatcttctcggcgttcggcaacatcctgtcctgcaaa
gtagcctgcgacgaaaaggggcccaagggctatgggttcgtgcacttccagaagcaggag
tccgccgagcgggccatagatgcgatgaatggcatgttcctgaactaccgcaaaattttc
gttgggagattcaagtcgcataaagaacgagaggccgaaaggggagcctgggccaggcag
tccaccagtgctgacgtcaaggatttcgaggaagacactgatgaggaggccaccttccga
tga

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