Bubalus kerabau (carabao): 129639626
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Entry
129639626 CDS
T11435
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04151
PI3K-Akt signaling pathway
bke04382
Cornified envelope formation
bke04510
Focal adhesion
bke04512
ECM-receptor interaction
bke04518
Integrin signaling
bke04820
Cytoskeleton in muscle cells
bke04926
Relaxin signaling pathway
bke04933
AGE-RAGE signaling pathway in diabetic complications
bke04974
Protein digestion and absorption
bke05146
Amoebiasis
bke05165
Human papillomavirus infection
bke05200
Pathways in cancer
bke05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
129639626 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
129639626 (COL4A6)
04518 Integrin signaling
129639626 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129639626 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
129639626 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
129639626 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
129639626 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
129639626 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129639626 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
129639626 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
129639626 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
129639626 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
129639626 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bke04147
]
129639626 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
bke00536
]
129639626 (COL4A6)
Exosome [BR:
bke04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
129639626 (COL4A6)
Glycosaminoglycan binding proteins [BR:
bke00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129639626 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
129639626
NCBI-ProteinID:
XP_055420731
LinkDB
All DBs
Position
X:complement(70186962..70524369)
Genome browser
AA seq
1706 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKPYGKPCGGQDCSGGCKCSPEKGARGRPGPIGIQGP
TGPQGLPGPSGLSGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYSGLPGPPGLPGQKGSKGEPVLAQGSFKGMKGEPGLPGLD
GITGPQGTPGSPGAVGPRGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPQGFPGVSGPPGLPGFGIAGEKGEKGIPGLPGPRG
PMGLEGVQGPPGSQGRKGSSGFPGLNGFPGIKGEKGGIGLPGPDIFIDTDGAVISGYPGD
PGMPGLPGLKGDEGIQGLPGPPGAPGLPALPGGPGALGPQGALGLKGERGNTGRTTTGAA
GLPGRDGLPGLPGLPGPPGTASETGTLQSTEPGSPGLRGERGPKGHPGLKGIKGDPGFCA
CDGGVPNMGPPGEPGLPGPPGLLGLPGLKGTKGDPGSGGAQGPSGDPGVFGPRGPIGPKG
KKGDPTLSTGSGMPGEQGDPGPQGIPGETGAPGKDGIPGLPGLPGLLGDGAQGFPGEKGL
PGLPGEKGHTGPTGPPGIGLPGAPGPRGLPGDKGVDGLPGQPGPRGVPGDCCCKEEVGKT
DLDTEGGITLPCIIPGPYGPSGLPGAPGFPGPKGARGLPGAPGQPGLRGNKGDPGSPGLV
HLPELPGFPGPHGEKGLPGFPGLPGKDGLPGKVGSPGLPGPKGAPGDILGAENGARGEQG
LQGLPGDRGFPGDSGLPGLKGLLGKSGLLGPKGERGSPGIPGRVGQPGPPGPSGLFGIKG
KPGLRGPPGFPGISGHPGKKGPRGEIGLPASAGKRGLPGLKGLPGPPGPIGFLGNSGLPG
ATGLPGLPGLKGEKGPVGLTGFPGIPGLPGIPGASGLKGIPGSTGRVGPSGWAGSPGEKG
DRGDPGPFGIPSHRPPMLNLLFKGDKGSQGSPGAIGFPGPRGDKGEAGHPGPPGLPGAPG
FPSLIKGLSGRPGPPGSTGLRGLPGLKGYPGIAGFQGIPGESGSQGLSGAPGLPGASGLP
GLKGDQGQTLGISGSPGPKGQPGESGFKGVKGKDGPIGDVGFPGNKGEDGKVGISGDVGL
PGSLGLPGVAGMRGNPGLPGSPGHPGTTGPLGPPGLIGTKGFPGLPGLHGLNGLPGTKGT
HGTPGPSITGVPGPAGLPGPKGEKGSPGIGIGAPGKPGIRGPKGSQGFPGLQGTAGLPGA
LGLSLPSVIEGQPGDPGRPGLDGERGRPGPPGPPGPPGPASDQGDPGDPGFPGIPGPQGP
KGDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGLPGMKGKAGPRGLSGPRGA
PGHTPIAEAIQAPPGPMGLPGIDGIPGLMGDPGVQGPVGLQGSKGLPGIPGKDGANGLPG
PPGALGDPGLPGLQGPPGFEGAPGKPGPFGRAGVPGQSLRVGYTLVKHSQSEQVPLCPSG
MSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWL
STTAPIPMMPVGQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGE
EPVSETLKAGQLHTRVSRCQVCMKSV
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgcttctggttactttgtgcctgaccgaggaactggcagga
gcgggagagaagaagccctatgggaagccatgtgggggccaagactgcagtgggggctgt
aagtgctctcctgagaaaggagccagagggagaccaggaccaattggaattcaaggtcca
acaggtcctcaaggacttcctggccctagtggtttatcagggttgaaaggagaaaggggc
tccccaggcccgctgggaccgtatggaccaaaaggcgataagggtcccatgggtgttccc
ggctttcttggcatcaatggaattccgggccaccctggacagccaggacccagaggccca
cctggcctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggc
tattctgggcttcctggaccacctgggcttcctggtcagaaaggctctaaaggtgaacct
gtccttgcccaaggtagtttcaaaggaatgaagggggagcctgggctgcccggactggat
ggaatcactggcccacaaggaacacccggatctccaggagctgtaggacccagaggacca
ccaggattgcaaggtcctcctggcccccctggtttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggagatgttggcctgcctggtcctgcagga
cccccaccatctactggagaactggagttcatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcctcagggcttcccaggagtaagtggtccacctggtctgccggga
tttggaattgctggagaaaaaggagaaaagggaattcctggtttgccaggaccaaggggt
cccatgggtttagaaggagtccaaggccctccggggagtcagggcaggaaggggtcttca
ggtttccccgggcttaatggattcccaggaattaagggtgaaaaaggtggcattggcctg
ccaggcccagatattttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cctggtatgccaggcctcccaggccttaaaggagatgaaggcatacagggcctacctggc
cctcctggcgcccctggattaccagctttaccaggtggccccggtgctctggggccccag
ggagctctaggcctgaagggggaacgaggaaacaccggccggaccacaacgggggcagct
ggtctccctggcagggatggtttgccaggcctgccaggcctaccaggcccacctggtaca
gcatctgagacgggaaccctacagagcacagaaccgggatcgccgggactccgaggggaa
cgaggtccaaaaggacacccaggcctcaaaggaattaaaggggacccaggtttttgtgct
tgtgatggtggtgtccccaacatggggccacctggggagccaggcctgcctgggccacca
ggacttctgggccttccaggtcttaaaggaaccaaaggtgatccaggctctgggggtgca
cagggcccatcaggggatccaggtgtatttgggcctcgaggtccaataggccctaaagga
aagaaaggggacccaactctcagcacaggatcagggatgccaggagagcaaggtgatcct
ggcccccagggaatccctggtgagacaggagccccaggcaaggatggaataccaggtttg
ccagggctgccaggccttctgggtgatggtgcacagggcttccccggtgagaaggggtta
ccaggacttcctggtgaaaaaggccacactggcccaactggccccccaggaattgggcta
ccaggggctcctggacctcgtggacttcctggagataaaggagtagatggattaccaggg
caaccaggcccccgtggagttccaggtgactgctgctgcaaggaggaggttgggaaaaca
gacttagacacagagggaggtatcaccttgccttgtattattcctggaccatatggtcca
tcaggactcccaggagctcccggattcccaggccctaaaggggcccgtggcctccctggg
gctccaggccaacctggattgcgtggaaataaaggggaccccggaagtccaggattggtt
cacctgcctgaattgccagggtttcctggacctcatggagagaagggcttgcctgggttt
cctgggctccctggaaaagacggcttgcctgggaaagttggcagccccggcttaccaggt
cccaagggagcccctggtgacatccttggtgctgaaaatggtgctcggggggagcaaggt
ctacagggactgcctggggacagaggatttcctggagactctggccttccaggactcaag
ggtttgcttgggaagtcgggcttgctcggccccaaaggtgagcggggcagccctggaata
ccaggccgcgtgggtcagccaggccccccaggccctagtggtctatttggcatcaagggc
aaacccgggctccgcggacccccaggctttccaggcatttcaggacatcctggaaagaaa
ggtccaagaggcgagataggtctccctgcgtcagctggaaagagaggcctgcctgggctg
aaagggcttccgggaccgccagggccaattggcttcctggggaactcaggcttgccaggg
gccactgggttgccaggcctgccaggtctgaagggtgagaaggggcctgttggactgaca
ggttttccagggattccaggtctccctggtattcctggagcaagtggattaaagggaatt
cctgggtcgacaggaagagtggggccatctggatgggctggtagccctggtgaaaaagga
gacagaggtgacccaggcccctttgggatacccagtcatcgacctccaatgctgaacctc
ctcttcaaaggagacaaaggttctcagggctcacctggagccattggatttccgggaccc
agaggtgacaaaggagaggctggccaccccgggccaccaggcttgcctggagctcctggc
ttccccagcctcatcaagggacttagtgggagaccaggcccccctggctccacaggacta
cggggcttacctggcctgaaggggtaccctggaattgcaggtttccaaggaattccagga
gaaagtggttcacagggtctcagtggagctcccgggctaccaggagcgtctggtctccca
ggtttaaaaggagatcaaggccagacacttggaatttctggtagcccgggacccaaggga
caacctggggagtctggtttcaaaggtgtgaaaggaaaagacggaccaattggtgatgtg
ggtttcccaggaaacaaaggcgaagatgggaaagttggcatttctggagatgttggcctt
cctggctccctaggactccccggagttgcaggcatgagaggaaatccagggcttccaggt
tctccaggccacccagggacaactgggcccctgggtccccctggcctaataggaaccaaa
ggtttccctggacttccaggtttacatggactgaatgggcttccaggaaccaaggggact
catggaactccaggacctagtataaccggtgtgcctgggccagctggcttgcctggtccc
aaaggggaaaaaggttctccaggaattggcatcggagccccaggaaagccaggtataaga
ggacccaaaggtagtcaaggttttccaggtctccagggcactgctggtctccccggtgca
ctgggcctctccttgccttcagtcatagaaggacagcctggtgaccctgggcgaccaggc
ctagatggagaacgaggccgcccaggcccccctgggcccccaggcccccctgggcctgcc
tcagatcaaggcgaccctggagaccctggcttccctggaattcctggccctcaagggccc
aaaggagaccaaggaattccaggtttctctggcctccctggagagctaggattgaaaggc
atgagaggtgagcctggcttcatggggactccaggcaaggttggaccacctggagaccca
ggacttcccgggatgaaggggaaggcggggccaagaggcttatccggccctcgaggtgct
cctggacacacacccattgcagaagccatccaggctccccctggacccatgggtcttcca
ggcattgatggaatccctggcctcatgggagaccccggggtccaaggacctgtgggccta
caaggatctaaaggtttacctggcatccccggcaaagatggcgccaatggactccctggc
ccacctggggctcttggtgatcctggtctccctggactacaaggccctccaggatttgaa
ggagctccagggaagccgggccccttcgggagggctggagtgcctggacagagcctgaga
gtgggctacaccttggtgaagcacagccagtcagaacaggtgcccctgtgccccagcggg
atgagccagctctgggtgggttacagcctgctgttcgtggaggggcaagagaaagcccac
aaccaggacctggggtttgctggctcctgcctgccccgcttcagcaccatgccattcatc
tattgcaacatcaatgaagtgtgccactatgcccgacggaatgataagtcctactggctc
tccaccactgcccccatccctatgatgccggtcggccagacacagatcccccagtacatc
agccgctgctctgtgtgtgaggcgccctcgcaagccattgctgtgcatagccaggacatc
accatcccacagtgccccctgggctggcgcagtctgtggattgggtactccttcctcatg
cacacagccgccggtgcagagggcgggggccagtccctggtctctcctggatcctgccta
gaggatttccgggctactcctttcatcgagtgcagtggtgcccggggcacctgccactac
tttgccaacaaatatagtttctggctgacaacagtggaagagaggcagcagtttggggag
gagcctgtatctgagacgctgaaagccggacagctccacacccgggtcagccgctgccag
gtgtgtatgaaaagcgtgtag
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integrated database retrieval system
