Bubalus kerabau (carabao): 129640059
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Entry
129640059 CDS
T11435
Symbol
NCBP2L
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear cap-binding protein subunit 2-like
KO
K12883
nuclear cap-binding protein subunit 2
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03013
Nucleocytoplasmic transport
bke03015
mRNA surveillance pathway
bke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129640059 (NCBP2L)
09122 Translation
03013 Nucleocytoplasmic transport
129640059 (NCBP2L)
03015 mRNA surveillance pathway
129640059 (NCBP2L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bke03019
]
129640059 (NCBP2L)
03041 Spliceosome [BR:
bke03041
]
129640059 (NCBP2L)
Messenger RNA biogenesis [BR:
bke03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
129640059 (NCBP2L)
Spliceosome [BR:
bke03041
]
Common components
Common spliceosomal components
Cap binding complex
129640059 (NCBP2L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
Motif
Other DBs
NCBI-GeneID:
129640059
NCBI-ProteinID:
XP_055421290
LinkDB
All DBs
Position
X:<69801881..69802389
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AA seq
169 aa
AA seq
DB search
HGATSNDLSILCNDSSLELSEYWDQKFSGDNDEQERLLIESSTLYVGNLXFYTTKEQIYE
LFSRCGDIENVYMGLDKIKKMACGFCFIEYFNRAEAENAMQFLNGTSLDDHIICTDWDLG
FREGRQYGRGQSGGQLGDEFHEDFNVDRGGFGKQAQVPGRRGIHSKSLC
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
catggcgccacgtccaatgacctaagcattctgtgcaatgactcctccctggagctgagc
gagtactgggaccagaagtttagtggtgacaacgatgagcaagaaagattactgatagaa
agctccacactttatgtggggaatcttntcttttatacaaccaaagagcaaatatatgag
ctctttagtaggtgcggtgacatcgagaatgtttatatgggcctggataaaataaagaaa
atggcctgtggtttctgtttcatagaatactttaacagagctgaggccgaaaatgccatg
caatttctaaatggcaccagcctagatgaccatattatctgcacagattgggatctaggc
tttagagagggcagacaatatggccgtggtcaatctgggggccagttaggagatgagttt
catgaagacttcaatgttgatagaggaggttttggaaaacaggctcaggtccctggtagg
agaggaatccattcaaaaagtctttgttaa
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