Bubalus kerabau (carabao): 129643829
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Entry
129643829 CDS
T11435
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04390
Hippo signaling pathway
bke04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
129643829 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
129643829 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bke03000
]
129643829 (SOX2)
Transcription factors [BR:
bke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129643829 (SOX2)
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Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129643829
NCBI-ProteinID:
XP_055424931
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Position
2:complement(131783173..131785261)
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AA seq
321 aa
AA seq
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MYNMMETELKPPGPQQTSGGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQR
RKMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKT
KTLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQD
QLGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMA
LGSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQ
HYQSGPVPGTAINGTLPLSHM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaagaac
agcccggaccgagtcaagcggcccatgaacgccttcatggtgtggtcccgcgggcagcgg
cgcaagatggcccaagagaaccctaagatgcacaactcggagatcagcaagcgcttgggc
gccgagtggaaacttttgtccgagacggagaagcggccgttcatcgacgaggccaagcgg
ctgcgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaacc
aagacgctcatgaagaaggataagtacacactgccgggagggctgctcgccccgggcggc
aacagcatggcgagcggggtcggggtgggcgccggcctcggcgcgggcgtgaaccagcgc
atggacagctacgcgcacatgaacggctggagcaacggcagctacagcatgatgcaggac
cagctgggctacccgcaacacccgggcctcaacgcgcacggcgccgctcagatgcagccc
atgcaccgctacgacgtgagcgccctgcagtacaactctatgaccagctcgcagacctac
atgaacggctcgcccacctacagcatgtcctattctcagcagggcacccctggcatggcg
cttggctccatgggctcggtggtgaagtccgaggccagctccagcccccccgtggttacc
tcttcttcccactccagggcgccctgccaagccggggacctccgggacatgatcagcatg
tacctccccggcgccgaggtgccggagcccgccgcccccagcagacttcacatgtcccag
cactaccagagcggcccggtgcccggcacggccattaacggcacactgcccctctcgcac
atgtga
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