Bubalus kerabau (carabao): 129646352
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Entry
129646352 CDS
T11435
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
129646352 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bke04040
]
129646352 (SCN9A)
Ion channels [BR:
bke04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129646352 (SCN9A)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Lustrin_cystein
DUF6739
Motif
Other DBs
NCBI-GeneID:
129646352
NCBI-ProteinID:
XP_055428346
LinkDB
All DBs
Position
3:83538667..83708003
Genome browser
AA seq
1986 aa
AA seq
DB search
MAMLPPPGPQSFVFFTKQSLALIEQRIAEGKAKEPKEEKKDDDDEGPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYMLSPFSPLRRISI
KILVHAAFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGE
FTFLRDPWNWLDFIVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCVQSSLANNETMENILNTLDEEEYAK
YFYYLEGSKDALLCGFSSDSGQCPEGYTCKKIGRNPDYGYTSFDTFSWAFLALFRLMTQD
YWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEARQKEL
EFQQMLDRLKKEQEEAEAIALAAAEYTSIGRSRIMGLSESSSETSKLSSKSAKERRNRRK
KKNQKKLSSGEEKGDNEKLSKSESDESIRRKSFHLGVEGHRRAREKRLSTPNQSPLSIRG
SLFSARRSSRTSLFSFKGRGRDIGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSSN
ISQASRSPPVLPVNGKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGTT
NQIHKKRRHSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHTF
LIWNCSPCWIKFKKFIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKNVLVVGNL
VFTGIFAAEMVLKLIAMDPYEYFQIGWNIFDSLIVTLSLVELFLSDVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISE
DCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVLN
LFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIKKGINYVKQTLREFVLKAFSKKPKIS
KEIRQTEDLNCKKENYISNRTLAEMSKDHKFHKEKDKTSGFGNSMDKYLMEESDGQSFIH
NPSLTVTVPIAPGESDLEIMNTEELSSDSDSEYSKGRLNRSSSSECSTVDNPVPGEEEAE
AEPVNSDEPEACFTDGCVQRFPCCQVNIESGKGKIWWNIRKTCFRIVEHSWFESFIVLMI
LLSSGALAFEDIYIEKKKNIKIILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCWLD
FLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIM
NVLLVCLIFWLIFSIMGVNLFAGKFYECINTTNGLRFPTSEVENRSACLALMNVSQNVRW
KNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVDKQPIYEYSLYMYIYFVIFII
FGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGN
KFQGCIFDLVTNQAFDIAIMVLICLNMVTMMVEKEGQSAYMTEVLNWINVVFIILFSGEC
VLKLISLRCYYFTIGWNIFDFVVVILSIVGMFLADLIERYFVSPTLFRVIRLARIGRILR
LIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNFE
TFANSMICLFQITTSAGWDGLLAPILNSKPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVS
YIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEYSKL
SDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGEGGEMDSLRSQ
MEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDGDR
DDDLPNKEDMVFDNVNENSSPEKTDATPSTVSPPSYDSVTKPDREKYEKDKTEKEDKGKD
GKEGKK
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgcctcccccgggacctcagagctttgtcttcttcacaaaacagtctctt
gccctcattgaacaacgtattgctgaaggaaaagcaaaggaacccaaagaagaaaagaaa
gacgatgacgatgaagggccaaagccaagcagtgacttggaagccggcaagcaactgccc
ttcatctatggggacattcctccgggcatggtgtcagagcccctggaggacttggaccct
tactatgcagacaaaaaaactttcatagtgttgaacaaagggaaagcaatcttccgtttc
aatgccacgcctgctttgtacatgctctctcctttcagtcctctcagaagaatatctatt
aagattttagtacatgccgcattcagcatgcttatcatgtgcactattctgacgaactgc
atatttatgaccatgagtaatcctccagactggaccaagaatgtagagtacacttttact
ggaatatatacatttgagtcacttgtgaaaatccttgcaagaggattctgtgtaggagaa
ttcacttttcttcgtgacccatggaactggcttgatttcatagtcattgtctttgcgtat
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtgttgaga
gctttgaaaactatttctgtaatcccaggcctgaagaccatcgtgggggccctgatccag
tctgtgaaaaagctctcagatgtcatgatcctgactgtgttctgtctgagcgtgtttgcc
ctgattgggctgcagctctttatgggcaacctgaagcataaatgtgtgcagagttcactt
gcaaataatgaaacaatggaaaacatattgaataccctagatgaagaagaatatgcaaaa
tatttctattacttggagggatccaaagatgctctcctttgtggtttcagcagtgattca
ggtcagtgtccagaagggtacacctgtaagaagattggcagaaatcctgactatggctac
acgagcttcgatactttcagctgggccttcttagccttgtttcggctaatgacccaggat
tactgggaaaacctttaccaacagaccctgcgtgctgctgggaaaacctacatgatcttc
tttgttgtggtgattttcctgggatccttttatctaataaacttgatcttggctgttgtt
gccatggcctatgaagaacagaaccaggcaaacattgaagaagcgaggcagaaagagtta
gaatttcagcagatgctggatcgacttaaaaaagagcaagaggaagcggaggcaatagca
ttagcggcagctgaatacaccagcattgggagaagcagaataatgggtctctctgagagt
tcttctgaaacatccaaactgagctctaaaagtgctaaagaaagaagaaacagaagaaag
aaaaagaaccagaagaaactctccagcggggaagaaaagggagacaatgagaaactgtcc
aaatcggaatccgatgagagcatcaggagaaaaagtttccaccttggtgttgaaggtcat
aggcgagcacgtgaaaaaagattgtctacccctaaccagtcaccactcagcattcgtggc
tccttgttttctgcaaggcggagcagcagaacaagtcttttcagcttcaaaggtcgagga
agagatatcggatctgagactgaatttgctgacgatgagcacagcatctttggtgacaac
gagagcagaaggggctccctgtttgtgccccacagacctcgggagcggcgcagcagtaac
atcagccaagccagtaggtctcccccagtgctgccagtgaatgggaagatgcacagcgct
gtcgactgcaatggcgtggtctccctggtggatggaccctccgccctcatgctacccaat
ggacagctcctgccagaggtgataatagataaggcaacttctgatgacagcggtacaacc
aatcaaatacacaagaaaagacgtcacagttcttacctcctttctgaggatatgttgaat
gaccccaatctcagacaaagggcaatgagtagggcaagcatattaacaaacactgtagaa
gaacttgaggagtccagacagaaatgtccaccttggtggtatagatttgcacacacattc
ttgatctggaattgctctccatgttggataaaattcaaaaaatttatctattttattgta
atggatccttttgtagatcttgctattaccatttgcatagttttaaacacattgttcatg
gctatggaacatcacccaatgactgaggaattcaaaaatgtgctcgttgtgggaaatttg
gtctttactggcatctttgcagctgaaatggttttaaaactaattgccatggatccatat
gagtatttccaaataggatggaatatttttgatagtcttattgtgaccttaagcttagtg
gaactttttctatcagatgtggaaggattgtcagttctacgatcattcagactgctccga
gttttcaagttagcaaaatcttggccaacactgaacatgctgatcaagatcattggcaat
tcagtgggggctctgggaaacctaaccttggtgttggccatcatcgtcttcatttttgct
gtggttggcatgcagctctttggtaagagctacaaagaatgtgtttgcaagatcagtgaa
gactgcaaactcccacgctggcacatgaatgacttcttccactccttcctgattgtgttc
cgggtgctgtgtggagagtggatagagaccatgtgggactgcatggaggtcgctggtcaa
gccatgtgccttattgtttacatgatggtcatggtcattggaaacctggtggtcctcaac
ctatttcttgctttattgctgagctcatttagttcagacaatcttacagcaattgaagaa
gacactgatgcaaacaacctccagattgcagtggccagaattaagaagggaataaattac
gtgaaacaaaccttacgtgagtttgttctaaaagcattttccaaaaagccaaagatttcc
aaagagattagacaaacagaagatctaaattgtaaaaaggaaaactacatctctaaccgc
acacttgctgaaatgagcaaggatcacaaattccacaaagaaaaagataaaaccagcggt
tttggaaacagcatggacaaatacttaatggaagaaagtgatggtcaatcatttattcat
aatcccagcctcacagtgacagtgccaattgcaccgggggaatctgatttggaaattatg
aacactgaggagcttagcagtgactcagatagtgaatacagcaaagggaggctgaaccga
tcaagttcctcagagtgcagcacagttgataaccctgtgcctggagaagaagaggcagag
gctgagcctgtaaattcagatgagccagaggcctgttttactgatggttgcgtacagagg
ttcccatgctgtcaagttaacatagaatcagggaaaggaaaaatctggtggaacatcagg
aaaacctgcttcaggatagttgagcacagttggtttgaaagcttcattgttctcatgatc
ttgctcagcagtggtgctctggcttttgaagatatatatattgaaaagaaaaagaacatt
aagattatcctggagtatgctgacaagatattcacgtatatcttcattctggaaatgctt
ctaaaatgggtagcatatggttacaaaacctatttcaccaatgcctggtgttggctggat
ttcttaattgtcgatgtttctttggttacattagttgcaaacactcttggctactcagat
cttggtcccattaaatcccttcggacacttagagctttaagacctctgcgagctttatct
agatttgaaggaatgagggtggttgtgaatgcgctcatcggtgcaattccttctatcatg
aatgtgctacttgtgtgtctcatattctggctgatatttagcatcatgggagtaaatttg
tttgctggcaagttttatgagtgtattaacaccacaaatggattacggtttcctacaagt
gaagttgaaaaccgttctgcctgtcttgcgcttatgaatgttagtcaaaatgtgcgatgg
aaaaacctaaaagtgaactttgataatgttggacttggttacctgtctctacttcaagtg
gcaacatttaagggatggatggacattatgtatgcagcagttgattctgttaacgtagac
aagcagcccatttatgaatacagcctctacatgtatatttattttgtcatcttcatcatc
tttgggtcattcttcactttgaacttgttcattggtgtcatcatagataatttcaaccaa
cagaaaaagaagcttggaggtcaagatatctttatgacagaagaacagaagaaatattat
aatgcaatgaaaaagctgggatctaagaaaccacaaaagccaatacctcggccagggaac
aaattccaaggatgtatctttgacctagtaacaaaccaagcttttgatatagccatcatg
gttctgatctgcctcaacatggtaaccatgatggtagaaaaagagggacaaagtgcctac
atgactgaagttttaaattggatcaatgtggtttttattatcctgttctctggagaatgt
gtgctgaaactgatctccctcagatgctactacttcactataggctggaacatctttgat
tttgtggttgtaattctctccattgtaggtatgtttctggcagatttgatagaaaggtat
tttgtgtcccctaccctattccgagtgattcgtcttgccaggattggccgaatcctgcgt
ctgatcaaaggggctaaggggatccgcacgctgctctttgctttgatgatgtcccttcct
gcgctgtttaacattggcctcctgctcttcctggtcatgttcatctatgccatctttgga
atgtccaattttgcctatgttaaaaaggaagctggaattaatgacatgttcaactttgag
accttcgccaacagcatgatctgcctgttccagattactacctctgctggctgggatgga
ttgctggcacctatcctcaacagtaaaccaccggactgtgaccccaaaaaagttcatcct
ggaagctcagttgaaggagactgtgggaacccatctgttgggatattctatttcgtcagt
tacatcatcatatcatttctggtcgtggtgaacatgtacattgctgtcatcctggagaac
ttcagtgttgctactgaagaaagtactgagcccctgagtgaggacgactttgagatgttc
tatgaggtttgggagaagtttgatccagacgcgacccaatttatagaatatagcaaactc
tctgattttgcagctgccctggatcctcctcttctcatagcaaaaccaaacaaagtccag
ctcattgccatggacctgcccatggtcagtggggacaggatccactgccttgacatctta
tttgcttttacaaagcgtgttttgggggaaggtggagagatggactctcttcgttcacag
atggaagaaaggttcatgtctgcaaatccctctaaggtgtcttatgagcccatcacaact
acactaaaaagaaagcaagaggatgtgtctgctacagtcattcagcgtgcttacagacgt
taccgcttacggcaaaatgtcaaaaatatatcaagtatatacatcaaagatggtgacaga
gatgatgatttgcccaataaagaagatatggtttttgataatgttaatgagaactcaagt
ccagaaaaaacagatgcaactccatccactgtctctccaccttcttatgatagtgtaaca
aaaccagacagagagaaatatgaaaaagacaaaacagaaaaggaagacaaagggaaagat
ggcaaggaaggcaaaaaatag
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integrated database retrieval system
