Bubalus kerabau (carabao): 129646361
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Entry
129646361 CDS
T11435
Symbol
SCN2A
Name
(RefSeq) sodium channel protein type 2 subunit alpha isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
129646361 (SCN2A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bke04040
]
129646361 (SCN2A)
Ion channels [BR:
bke04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129646361 (SCN2A)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129646361
NCBI-ProteinID:
XP_055428366
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Position
3:complement(84496728..84584507)
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AA seq
2006 aa
AA seq
DB search
MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDESGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATPALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSSFELNITSFFNNSL
DGNGTTFNRTVSMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESREFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQSGEEEKEDGVRKSESEDSIRRKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFRGRAKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRHSNVSQASRASRVLPILPMNGKMHSAVDCNGVVSLVGGP
SALTSPAGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTARQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGLIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKR
KIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILVSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQVYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECKALIDNNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFSKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSCIYKKDKGKEGEGTPIKEDILIDKLNENSTPEKTDMTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtcagtgctggtaccgccaggacctgacagcttccgcttctttaccagggaa
tcccttgctgctattgaacaacgcattgcagaagagaaagctaagagacccaaacaagag
cgcaaggatgaggatgatgaaagtggcccaaagccaaatagtgacttggaagcaggaaaa
tcccttccatttatttatggagacattcctccagaaatggtgtcagagccactggaggat
ctggatccctattatatcaataagaaaacatttatagtattgaataaagggaaagcaatc
tctcgattcagtgccacccctgccctgtacattttaactcccttcaaccctattagaaaa
ttagctattaagattttggtacattctttattcaatgtgctcattatgtgcactattctt
accaactgtgtatttatgaccatgagtaaccctccagactggacaaagaatgtggagtac
acctttacaggaatttatacttttgaatcacttataaaaatacttgcaaggggcttttgt
ttagaagatttcacatttctacgggacccatggaattggttggatttcacagtcattact
tttgcatatgtgacagagtttgtggacctgggcaatgtctcagcgttgagaaccttcaga
gttctccgagctttgaaaacaatttcagtcattccaggcctgaagaccatcgtgggggcc
ctaatccagtcggtgaagaagctctcagatgtaatgatcctgactgtgttctgcctgagc
gtgtttgcactaataggattacagctgtttatgggcaacctgcgaaacaaatgtttgcaa
tggcccccagataattcttcctttgaactaaacatcacttccttctttaataactcgttg
gatgggaacggtaccactttcaataggacagtgagcatgtttaattgggatgaatatatt
gaagataaaagtcacttttattttttggaagggcaaaatgatgctctgctttgtggcaac
agctctgatgcaggccagtgtccagaaggatacatctgtgtgaaggctggtcgaaacccc
aactatggctacacaagcttcgacacctttagctgggctttcctgtccttatttcgtctc
atgactcaagacttctgggaaaacctttatcagctgacactacgtgctgctgggaaaaca
tacatgatattttttgtgctggtcattttcttgggctccttctatctaataaatttgatc
ctggctgtggtggccatggcctatgaagaacagaatcaggcaacgctggaagaggctgaa
cagaaagaagctgaatttcagcagatgcttgaacagcttaaaaagcaacaagaagaagct
caggcagcagctgcagcagcttcggctgaatcaagagagttcagcggtgctggtgggatc
ggggttttctcagagagttcttcagtagcatcaaagttgagctccaagagtgaaaaagag
ctgaaaaacagaaggaagaagaagaaacagaaagaacagtctggagaagaagaaaaggaa
gatggggtccgcaaatctgaatctgaagacagcataagaagaaaaggtttccggttttcc
ttggaaggaagcaggctgacatatgaaaagaggttttcctctccacatcagtctttactg
agcatccgtggctccctgttctctccaagacgcaacagtagggccagccttttcagcttc
agaggccgagccaaggatattggctctgagaatgattttgcggatgacgagcacagcacc
tttgaggacaatgacagcagaagagactctctgtttgtgccgcacagacatggggagcgg
cgccacagcaacgtcagccaggccagccgtgcctccagggtgctccccattctgcccatg
aacgggaagatgcacagcgctgtggactgcaacggagtggtctccctggtcgggggccct
tctgccctcacatctcctgctgggcagctcctgccagagggcacaactactgaaacagaa
ataagaaagagacggtccagttcttatcatgtttccatggatcttttggaagatcctaca
gcaaggcaaagagcaatgagtatggctagtattttgaccaacaccatggaagaacttgaa
gaatccagacagaaatgcccaccgtgctggtataaatttgctaacatgtgtttgatttgg
gactgctgtaagccatggttaaaggtgaaacatgttgtcaacctggttgtgatggaccct
tttgttgacctggccatcaccatctgcattgtcttaaacaccctcttcatggccatggag
cactatcccatgacggagcagtttagcagcgtgctgtcagttgggaacctggtcttcact
gggatcttcacagcagaaatgtttctcaagataattgccatggatccatattattacttt
caagaaggctggaatatttttgatggtttaattgtgagccttagtttaatggaacttggt
ttggcaaatgtggaaggactgtcagttctccgatcatttcgactgcttagagttttcaag
ttggcaaaatcctggcccaccctgaatatgctaattaaaatcatcggcaattctgtaggg
gctctgggtaacctcaccttggtgttggccatcatcgtcttcatttttgccgtggtcggc
atgcagctctttggtaagagctacaaagaatgtgtctgcaagatttccaatgattgtgaa
ctccctcgctggcacatgcatgacttcttccactccttcctgattgtgttccgggtgctg
tgtggagagtggatagagaccatgtgggactgcatggaggtcgccggtcaaaccatgtgc
cttactgtcttcatgatggtcatggtcattggaaacctggtggttctgaacctcttcctg
gccttactcttgagttcattcagttctgacaatcttgccgccactgatgatgataatgaa
atgaataatctccagattgctgtgggaaggatgcagaaaggaatcgattttgttaaaaga
aaaatacgtgaatttattcagaaagcctttgttagaaagcagaaagctttagatgaaatt
aaacctcttgaagatctaaataacaaaaaagacagctgtatttccaaccataccacgata
gaaataggcaaagacctcaattatctcaaagatggcaatggaactaccagtggcataggc
agcagcgtagaaaagtatgtcgtggatgaaagtgattacatgtccttcataaacaacccc
agcctcactgtgactgtaccaattgctgtcggagagtctgactttgaaaatttaaatact
gaagaattcagcagcgagtcagatatggaagaaagcaaagagaagctaaatgcaactagt
tcatctgaaggcagcacagttgatataggagctcccgctgagggggaacaacctgaagct
gagcctgaagaatctctggagcctgaagcctgttttacggaagactgtgtgcggaagttt
aagtgttgtcagataagcatagaagaaggcaaagggaaactctggtggaacttgagaaaa
acttgctataagatagtggagcataactggttcgaaaccttcattgtcttcatgattctg
gtcagcagtggggcactggcctttgaagatatatatattgaacagcgaaaaaccattaag
accatgttagaatatgctgacaaagttttcacttatatattcatcctggaaatgcttctc
aagtgggttgcatatggctttcaagtgtattttaccaatgcctggtgctggttagatttc
ctgatcgtcgatgtctcattggttagcttaactgcaaatgctttgggatactcagaactt
ggtgccatcaaatccctcagaacactaagagctctgaggccgctgagagctttatcccgg
tttgaaggaatgagggtcgttgtcaatgctcttttaggagccattccatccataatgaat
gtacttctggtttgcctgatcttttggttgatattcagtatcatgggagtgaatcttttt
gctggcaagttttaccactgtattaactacaccactggagaaatgtttgatgtcagcgtg
gtcaacaattacagcgaatgtaaggccctcatagataacaaccaaactgcccggtggaag
aacgtgaaagtcaactttgataatgtgggacttgggtatctttctctgcttcaagtagcc
acatttaaaggatggatggatatcatgtatgcagcagttgattcacgaaatgtagaatta
caacccaagtatgaagacaatctgtacatgtatctgtattttgtcatctttattattttt
ggttcattctttactctaaatcttttcattggtgtcatcatagataacttcaaccagcag
aaaaaaaagtttggaggtcaagacatttttatgacagaagaacagaagaaatactacaat
gcaatgaaaaaattgggttcaaagaaaccacaaaaacccatacctcgacctgctaacaaa
ttccaagggatggtctttgatttcgtaaccaaacaagtctttgatatcagcatcatgatc
cttatctgcctcaacatggtcaccatgatggtggagactgatgaccagagtcaagaaatg
accaacattctgtactggattaatctggtgtttatcgttctgttcactggagaatgtgtg
ctgaaactgatctctcttcgttattactatttcaccattggatggaatatttttgatttt
gtggtggttattctttccattgtaggtatgtttctggctgagctgatagagaaatatttt
gtgtcccctaccttgttccgagtgattcgtcttgccaggattggccgaatcctgcgtctg
atcaaaggggctaagggaatccgcacgctgctttttgctttgatgatgtctcttcctgca
ttgtttaacatcggcctcctgctcttcctggtcatgttcatctatgccatctttggaatg
tccaacttcgcgtatgttaagagggaggttggaattgacgacatgttcaactttgagacc
tttggcaacagcatgatctgcctgttccagattaccacctctgctggctgggatggattg
ctagcacctatcctcaatagtggacctccagactgtgaccctgaaaaagatcaccctggc
agctcagttaagggagactgtggaaacccgtctgttgggattttctttttcgtcagttac
atcatcatatcatttctggtcgtggtgaacatgtacattgctgtcatcctggagaacttc
agtgttgctactgaagaaagtgcagagcccctgagtgaggacgactttgagatgttctac
gaggtttgggagaagtttgatcctgatgccacccagttcatagagttctccaagctctct
gattttgcagcggccctggatcctcctcttctcatagcaaaaccaaacaaagtccagctc
attgccatggacctgcccatggtcagtggggacaggatccactgccttgacatcttattt
gcctttacaaagcgtgttttgggtgagagtggagagatggatgcccttcgaatccagatg
gaagaaagattcatggcatcgaacccctccaaagtctcatatgagcccattacaaccact
ctgaaacgcaaacaagaggaggtgtctgctattgttatccagagggcctatagacgctac
ctcttgaagcaaaaagttaaaaaagtttcatgtatatataagaaagacaaaggcaaagaa
ggtgagggaacacccatcaaagaagatatcctcattgataaactaaatgagaattcaact
ccagagaaaaccgacatgaccccttccaccacgtctccaccttcctatgacagtgtgacc
aaacccgagaaagaaaaatttgaaaaagacaaatcagaaaaggaagacaaagggaaagat
atcagggaaagtaaaaagtaa
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