Bubalus kerabau (carabao): 129646977
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Entry
129646977 CDS
T11435
Symbol
WDTC1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1 isoform X1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
bke
Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bke04121
]
129646977 (WDTC1)
Ubiquitin system [BR:
bke04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
129646977 (WDTC1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
TPR_19
DSE1_N
TPR_1
TPR_2
TPR_17
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
PAC11
Beta-prop_SPT8
TPR_11
TPR_16
Beta-prop_Aladin
Beta-prop_WDR41
ANAPC3
Beta-prop_HPS5
Beta-prop_EIPR1
TPR_14
Beta-prop_WDR35_TULP_N
TPR_6
NBCH_WD40
ASA1
TPR_BSK1_C
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_SCAP
CFAP70_TPR_C
Barstar
Motif
Other DBs
NCBI-GeneID:
129646977
NCBI-ProteinID:
XP_055429981
LinkDB
All DBs
Position
3:complement(179863996..179927639)
Genome browser
AA seq
678 aa
AA seq
DB search
MAKVNITRDLIRRQIKERGALSFERRYHVTDPFIRRLGLEAELQGHSGCVNCLEWNEKGD
LLASGSDDQHTIVWDPLHHKKLLSMHTGHTANIFSVKFLPHAGDRILITGAADSKVHVHD
LTVKETIHMFGDHTNRVKRIATAPMWPNTFWSAAEDGLIRQYDLRENSKHSEVLIDLTEY
CGQLVEAKCLTVNPQDNNCLAVGASGPFVRLYDIRMIHNHRKSMKQSPSAGVHTFCDRQK
PLPDGAAQYYVAGHLPVKLPDYNNRLRVLVATYVTFSPNGTELLVNMGGEQVYLFDLTYK
QRPYTFLLPRKCHSSGEVQNGKMSTNGVSNGVSNGLHLHSNGFRLPETRGHVSPQVELPP
YLERVKQQANEAFACQQWTQAIQLYSKAVQRAPHNAMLYGNRAAAYMKRKWDGDHYDALR
DCLKAISLNPCHLKAHFRLARCLFELKYVAEALECLDDFKGKFPEQAHSSACDALGRDIT
AALFSKSDGEEKKGAGGGGGPVRLRSMSRKDSISEDEMVLRERSYDYQFRYCGHCNTTTD
IKEANFFGSNAQYIVSGSDDGSFFVWEKETTNLVRVLQGDESIVNCLQPHPSYCFLATSG
IDPVVRLWNPRPESEDLTGRVVEDMEGASQANQRRMNADPLEVMLLNMGYRITGLSSGGA
GASDDEDSSEGQVQCRPS
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtcaacataactagagacctcatccgcaggcagataaaggagcggggtgcc
ctgagctttgagcggcgctaccatgtcactgatccctttatcagacggctgggcctggaa
gcagagctgcagggtcactcaggatgtgtcaactgcctggagtggaacgagaaaggagac
ttgctggcctctggttctgacgaccagcacacgattgtgtgggacccgctgcaccacaag
aagctgctttccatgcacacaggacacactgcaaatatcttctctgtcaagttcctgcct
cacgctggggaccgcatcttgatcacaggggcagctgactccaaggtgcacgtccacgac
ctgacagtgaaggagacgatccacatgtttggagaccacacaaaccgggtgaaacgcatc
gccacagcacccatgtggcccaacacgttctggagcgctgctgaggatgggcttatccgc
cagtacgaccttcgggagaacagcaaacactcagaggtgctgatcgacctgacagagtac
tgtggccagctggtggaggccaagtgcctgaccgtcaacccccaggacaacaactgcctg
gccgtgggggccagcgggccctttgtgaggctctacgacatccgcatgatccacaaccac
agaaaaagcatgaagcagagcccttcagcaggtgtgcacaccttctgtgaccggcagaag
cccctcccggatggcgcagcccagtattacgtagcaggtcacctgccagtgaagctgcct
gactacaacaaccgtctgagagtgctggttgccacctatgtcaccttcagccccaatggc
acagagctgctggtcaacatgggaggagagcaggtctatttgtttgacctgacttacaag
cagcggccgtacaccttcctcttgcctagaaaatgccactcctcaggggaagttcagaat
ggcaagatgtccaccaacggtgtgtccaacggcgtgtccaatggcctgcaccttcacagc
aatggcttccggctgccagagactagggggcatgtcagcccccaggtagagctgccccca
tacctggagcgggtgaaacagcaagccaatgaggcttttgcttgccagcagtggacccag
gccattcagctttacagcaaggccgtgcagagggcccctcacaacgcgatgctctacggg
aaccgagcggctgcctacatgaagcgcaagtgggatggcgaccactacgacgccctgagg
gactgcctcaaggccatctccctaaatccatgccacctgaaggcgcacttccgcctggcc
cgatgcctctttgagctcaagtacgtggctgaggccctagagtgcctggatgatttcaaa
gggaagttcccggagcaggcccacagcagcgcctgtgacgcactgggacgcgacatcacg
gccgccctcttctccaaaagtgatggcgaggagaagaagggagcaggcggtggcggcggc
cccgtccgcctccgcagcatgagccgcaaggactccatctccgaggacgagatggtgctg
cgggagcgaagctacgactaccagttccgctactgtggccactgcaacaccaccacggat
atcaaggaggcgaatttctttggcagcaacgctcagtatatcgtcagtggctctgacgat
ggctccttcttcgtctgggaaaaggagaccaccaacctggtccgcgtgctgcagggcgac
gaatccatcgtcaactgcctgcagccacaccccagctactgcttcctggccaccagcggc
atcgaccctgttgtgcggctctggaacccccggccagagagtgaagacctcacaggccga
gttgtggaggacatggagggcgcctcccaggccaaccagcggcgcatgaacgcggacccg
ttggaggtgatgctgctcaacatgggctaccggatcacaggcctgagcagtgggggtgca
ggggcctctgacgacgaggacagctcggagggccaggtgcagtgccggcccagctag
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