Bubalus kerabau (carabao): 129646992
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Entry
129646992 CDS
T11435
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03082
ATP-dependent chromatin remodeling
bke04714
Thermogenesis
bke05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
129646992 (ARID1A)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
129646992 (ARID1A)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
129646992 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bke03000
]
129646992 (ARID1A)
03021 Transcription machinery [BR:
bke03021
]
129646992 (ARID1A)
03036 Chromosome and associated proteins [BR:
bke03036
]
129646992 (ARID1A)
Transcription factors [BR:
bke03000
]
Eukaryotic type
Helix-turn-helix
ARID
129646992 (ARID1A)
Transcription machinery [BR:
bke03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
129646992 (ARID1A)
Chromosome and associated proteins [BR:
bke03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
129646992 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129646992
NCBI-ProteinID:
XP_055430007
LinkDB
All DBs
Position
3:complement(180303152..180371823)
Genome browser
AA seq
2287 aa
AA seq
DB search
MAAQVAPAAASSLGNPPPPPSELKKAEQQQQQQREEAGGEAAAAVAAERGEMKAAAGQES
EGPAVGPPQPLGKELQDGAESNGGGGGGGAGGPGAEPDLKNSNGNAGPRPALNNNLTEPP
GGGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRSPSAVAAAAAAVFHQQHGGQQSPGL
AALQSGGGGGGLEPYAGPQQNSHDHGFPNHQYNSYYPNRSAYPPPPQAYALSSPRGGTPG
SGAAAAAAAGSKPPPSSSASASSSSSSFAQQRFGAMGGGGPSAAAGGTPQPTATPTLNQL
LTSPSSARGYQGYPGGDYGGGPQDGGAGKGPADMASQCWGAAAAAAAAAAAASGGAQQRS
HHAPMSPGSSGGGGQSLPRTPQPSSPMDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGY
PGQPYGSQTPQRYPMTMQGRAQSTMGGLSYAQQIPPYGQQGPSGYGQQGQTPYYNQQSPH
PQQQQPPYSQQPPSQTPHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQPSPTPYPSQ
QSSTQQHPQSQPPYSQPQAQSPYQQQQPQQPASSTLSQQAAYPQPQSQQSQQTAYSQQRF
PPPQELSQDSFGSQASSAPSMTSSKGGQEDMNLSLQSRPSSLPDLSGSIDDLPMGTEGAL
SPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPA
AVPGNQMPPRPPSGQSDSIMHPSMNQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQPS
GGQMHTGMGSYQQNSMGSYGPQGSQYGPQGGYPRQPNYNALPNANYPSAGMAGSMNPMGA
GGQMHGQPGIPPYGTLPPGRMSHASMGNRPYGPNMANMPPQVGSGMCPPPGGMNRKTQET
AVAMHVAANSIQNRPPGYPNMNQGGIMGTGPPYGQGINSMAGMINPQGPPYPMGGTMANN
SAGMAASPEMMGLGDVKLTPASKMNNKADGTPKTESKSKKSSSSTTTNEKITKLYELGGE
PERKMWVDRYLAFTEEKAMGMTNLPAVGRKPLDLYRLYVSVKEIGGLTQVNKNKKWRELA
TNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDIFAAADSKKSQPKIQPPSPAG
SGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAFPDGSDP
TFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMG
DPYSRAAGPGLGNVAMGPRQHYPYGGPYDRVRTEPGIGPEGNMGTGAPQPNLMPSNPDSG
MYSPSRYPPQQQQQQQQRHDSYGNQFSAQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTY
GPPAKRHEGEMYSVPYSAGQGQPQQQQLPPAQPPPANQQQAAQPPPQQDVYNQYGNAYPA
TAAAATERRPAGGPQNQFPFQFGRDRVSAPPGSNAQQNMPPQMMGGPMQASAEVAQQGTM
WQGRNDMTYNYANRQSTGSAPQGPAYHGVNRTDEMLHTDQRANHEGPWPSHGTRQPPYGP
SAPVPPMTRPPPANYQPPPSMQNHIPQVSSPAPLPRPMENRTSPSKSPFLHSGMKMQKAG
PPVPASHIAPAPVQPPMIRRDITFPPGSVEATQPVLKQRRRLTMKDIGTPEAWRVMMSLK
SGLLAESTWALDTINILLYDDNSIMTFNLSQLPGLLELLVEYFRRCLIEIFGILKEYEVG
DPGQRTLLDPGRFSKASSPAPVEGEEEEDLLGPKLEEEEEEEVIENDEEMAFSGKDKAAS
ENSEEKLISKFDKLPVKIVQKNDPFVVDCSDKLGRVQEFDSGLLHWRIGGGDTTEHIQTH
FESKTELLPSRPHVPCPPVPRKYVTAVEGTPGTTEQEGPPPDGPPEKRITATMDDVLSTR
SSTLTEEGAKSVEASKESSKFPFSISPAQSHRNIKILEDEPHSKDETPLCTLLDWQDSLA
KRCICVSNTIRSLSFVPGNDFEMSKHPGLLLILGKLILLHHKHPERKQAPLTYEKEEEQD
QGVSCNKVEWWWDCLEMLRENTLVTLANISGQLDLSPYPESICLPVLDGLLHWAVCPSAE
AQDPFSTLGPNAVLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYSTMVRFLSDR
KNPVCREMAVVLLANLAQGDSLAARAIAVQKGSIGNLLGFLEDSLAATQFQQSQASLLHM
QNPPFEPTSVDMMRRAARALLALAKVDENHSEFTLYESRLLDISVSPLMNSLVSQVICDV
LFLIGQS
NT seq
6864 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcaggtcgcccccgccgccgccagcagcctgggcaacccgccgccgccgccc
tcggagctgaagaaagcggagcagcagcagcagcagcagcgggaggaggcggggggcgag
gcggcggcggcggtcgcggcggagcgcggggaaatgaaggcagccgccgggcaggaaagc
gagggccccgccgtggggccgccgcagccactgggaaaagagctgcaggacggggccgag
agcaatgggggtggcggcggcggcggagccggcgggcccggcgcggagccggacctgaag
aactcgaacgggaacgcgggccctaggcccgccctgaacaataacctcacggagccgccc
ggcggcggtggcggcggcagcagcgacggggtgggggcgcctcctcactcagccgcggcc
gccttgccgcccccagcctacggcttcgggcaaccctacggccggagcccgtctgccgtc
gccgccgccgcggccgccgtcttccaccaacaacatggcggacaacaaagccctggcctg
gcagcgctgcagagcggcggcggcggcgggggcctggagccctacgcggggccccagcag
aactcgcacgaccacggcttccccaaccaccagtacaactcctactaccccaaccgcagc
gcctaccccccgcccccccaggcctacgcgctgagctccccgagaggtggcactccgggc
tccggcgcggcggcggcggcggccgccggctccaagccgcctccctcctccagcgcctcc
gcctcctcgtcgtcttcgtccttcgctcagcagcgcttcggggccatggggggaggcggc
ccctcagcggccgcagggggaaccccccagcccaccgccacccccaccctcaaccaactg
ctcacgtcgcccagctcggcccggggctaccagggctaccccgggggcgactacggcggc
gggccccaggacgggggcgccggcaagggcccggcggacatggcctcgcagtgctggggg
gctgctgctgctgcggcggcggcggctgcggccgcctcgggaggggcccaacaaaggagc
caccacgcgcccatgagccctgggagcagcggcggcggggggcagtcgctcccccggacc
ccgcagccatccagtccaatggatcagatgggcaagatgagacctcagccatatggcggg
actaacccatactcgcaacaacagggacctccatcaggaccgcagcaaggacatgggtac
ccagggcagccatatgggtcccagaccccacagcggtacccgatgaccatgcagggccga
gcgcagagtaccatgggcggcctctcttatgcacagcagattcctccttatggacaacaa
ggccccagcgggtatggtcagcagggccagactccatattacaaccagcaaagtcctcac
ccccagcaacagcagccaccctactcccagcagccaccatcccagaccccccatgcccaa
ccttcgtatcagcagcagcctcagtctcagccaccgcagctccagtcctctcaacctccg
tactcccagcagccgtcccagcctccccatcagccgtccccgactccatacccctcccaa
cagtccagcacccagcagcacccccagagccagcccccctactcacagccgcaggcacag
tctccttaccagcagcagcaacctcagcagccagcatcctcgacgctttcccagcaggct
gcgtaccctcagccccagtctcagcagtcacagcaaactgcctactcccagcagcgcttc
cctccaccgcaggagttatctcaagattcatttgggtctcaggcatcctcagccccctca
atgacctccagtaagggagggcaagaagatatgaacctgagtcttcagtcaagaccttca
agcttgcctgatctgtctggttcaatagatgatctccccatggggacagaaggagctctg
agccctggagtgagcacatcagggatttccagcagccagggggagcagagtaatccagct
cagtctcccttctctccccatacctcccctcacctgcctggcatccgaggcccctcccca
tccccggttggctctcctgccagtgttgctcagtctcgctcaggaccactctcgcctgct
gcagtgccaggcaaccagatgccacctcggccacccagtggccagtcggacagcatcatg
catccttctatgaaccaatcaagcattgcccaagatcgaggttacatgcagaggaacccc
cagatgccccagtacagttccccccagcccgggtcagccttatctccacgtcagccttct
ggaggacagatgcacacaggcatgggctcctaccagcagaactccatggggagctatggt
ccccaggggagtcagtacggcccacagggaggctaccccaggcagccaaactataatgcc
ttgcccaatgctaactaccccagtgcaggcatggctggaagcatgaaccctatgggtgct
ggaggtcagatgcatgggcagcctggcatcccaccttatggcacactccctcccgggagg
atgagtcacgcctccatgggcaaccggccttatggccctaacatggccaatatgccacct
caggttgggtcagggatgtgtccccctcccgggggcatgaaccggaaaactcaagaaact
gctgtcgccatgcatgttgctgccaactcgatccaaaacagaccacccggctaccccaat
atgaatcaagggggcataatgggaactggacctccctatggacaggggattaatagtatg
gctggcatgatcaaccctcagggacccccatatcccatgggtggaaccatggccaacaat
tcagcaggaatggcagccagtccagagatgatgggtcttggggatgtcaagttaactcca
gcctccaaaatgaacaacaaggcagatgggacacccaagacggaatctaaatccaagaaa
tccagttcttctactacaaccaatgagaagatcaccaagttgtatgagctgggtggtgag
cctgagaggaagatgtgggtggaccgttatctggccttcacggaggagaaggccatgggc
atgacaaatctgcctgctgtgggtaggaaacctctggacctgtaccgcctctatgtgtct
gtgaaggaaattggtggattgactcaggtcaacaagaacaagaagtggcgggaacttgcg
accaacctcaatgtcggcacctcaagcagtgctgccagctccttgaaaaagcagtacatc
cagtgtctctatgcctttgagtgcaagatcgaacggggagaagaccctcccccagacatc
tttgcagctgctgattccaagaagtcccagcccaagatccagcctccctcgcctgcggga
tcagggtcgatgcaggggccacagacacctcagtcaaccagcagctccatggcagaagga
ggagacctgaagccaccgactccagcatccacgccgcacagccagatcccccccttgcca
ggcatgagtaggagcaattcagttgggatccaggatgcctttcctgatggaagtgacccc
acattccagaagcggaattccatgactccaaaccctgggtaccagcccagtatgaatacc
tccgacatgatggggcgcatgtcctatgagccaaataaggatccttacggcagcatgagg
aaagctccggggagcgatcccttcatgtcctcaggtcagggccccaatggcgggatgggg
gacccctacagccgagctgccggccctgggctgggaaatgtggcaatgggaccgcgacag
cactatccctatggaggtccttatgacagagtgaggacggagcctggcataggacctgag
ggaaacatgggcactggggccccacagccgaatctcatgccttccaacccagactcgggg
atgtattctcccagccgttacccgccgcagcagcagcagcagcagcagcaacgacatgat
tcctatggcaatcagttctccgctcaaggcaccccttccggcagccccttccccagccag
cagaccacaatgtatcagcagcagcagcagaattacaagcggccgatggatggcacctac
ggccctcctgccaagcggcacgaaggggagatgtacagcgtgccgtacagcgcggggcag
gggcagccccagcagcagcagctgccccccgcccagcccccacctgccaaccagcagcaa
gctgctcagcctccccctcagcaggacgtgtacaaccagtacggcaacgcctatcctgcc
actgccgctgctgctactgagcgccgaccagcaggcggcccccagaaccagtttccattc
cagtttggccgggaccgtgtctcagcaccccctggctccaatgcccagcagaacatgcca
ccacagatgatgggcggccccatgcaggcatcggctgaggttgcccagcaaggcaccatg
tggcaggggcgcaatgacatgacctacaactacgccaacaggcagagcacgggctcggcc
ccgcaaggccccgcctatcatggcgtgaaccgaacagacgaaatgctgcacacggatcag
agggccaaccatgaaggcccctggccttcccatggcacacgccagcccccctatggtcct
tctgcccccgtgccccccatgacaaggccccctccagccaactaccagcccccaccaagc
atgcagaatcacattcctcaggtatccagccccgctcccctgccccggccaatggagaac
cgcacctctccgagcaagtctccattcctgcactctgggatgaagatgcagaaggcaggg
cccccagtacccgcctcgcacatagcacctgctcccgtgcagccccctatgattcggcgg
gacatcaccttcccacctggctctgttgaagccacacagcctgtgttgaagcagaggagg
cggcttacaatgaaagacattggaaccccggaggcatggcgggtaatgatgtccctcaag
tctgggctgctggcagagagcacgtgggcattagacaccattaacatcctgctgtacgat
gacaacagcatcatgactttcaacctcagtcagctcccagggttgctcgaactccttgtg
gaatatttccgacgttgcctgattgagatctttggcattttaaaggagtatgaggtgggt
gacccaggacagagaacactattggaccctgggagattcagcaaagcgtctagtccagcc
cctgtggagggggaggaggaggaagaccttctaggtcccaaactagaggaggaagaagag
gaggaagtaattgaaaatgatgaggagatggccttttcgggcaaggacaaagcagcctca
gagaatagtgaggagaaactgattagtaagtttgacaagcttccagtaaagatcgtgcag
aagaatgacccgtttgtggtggactgctctgataagcttgggcgcgtgcaggagtttgac
agcggcctgctgcactggcggattggtgggggcgacaccactgagcatatccagacccac
tttgagagcaagacagagctgctgccttcccggcctcatgtgccctgcccaccagtccct
cggaagtatgtcacagcagtagagggcacaccagggacaacagagcaggagggcccccca
cccgatggccctccagagaaacggatcacggccactatggatgacgtgttgtccacgcgg
tctagcacactgaccgaggagggagctaagagtgtagaggcctccaaggaaagcagcaag
tttccattcagcatcagcccagcgcagagccatcggaacatcaagatcctagaggatgaa
ccccacagtaaagatgagacgccactgtgtacccttctggactggcaggattcccttgcc
aaacgctgcatctgtgtctccaacaccatccgaagcctgtcgtttgtgccaggcaacgac
tttgagatgtccaaacacccggggctgctgctgatcctgggcaagctgatccttctgcac
cacaagcacccagaacggaagcaggcaccactaacttacgagaaggaggaggagcaggac
caaggggtgagctgcaacaaagtggagtggtggtgggactgcttggagatgcttcgggaa
aacaccttggtcacgctcgccaacatctcggggcagctggacctctccccgtaccccgag
agcatttgcctgcctgtcctggacggactcctacactgggcagtctgcccttccgctgag
gcccaggaccccttctccaccctgggccccaacgccgtcctctccccccagagactggtc
ttggaaaccctcagcaaactcagcatccaggacaacaatgtggacctgatcctggccacg
ccccccttcagccgcctggagaagttgtatagcaccatggtgcgcttcctcagtgaccga
aagaacccagtgtgccgggagatggctgtagtactgctggccaacctggcacagggcgac
agcctggcagcccgtgccatcgcagtgcagaagggcagcatcggcaacctcctgggcttc
ctggaggacagccttgctgccacacagttccagcagagccaggccagcctgctccacatg
cagaacccgccctttgagccgaccagtgtggacatgatgcgacgggctgcccgtgcgctg
ctggccctggccaaggtggacgagaaccactcggagttcacgctgtatgagtcacggctg
ttggacatctcggtatcaccgctgatgaactcactggtttcacaagtcatttgtgatgta
ctgtttttgattggccagtcatga
DBGET
integrated database retrieval system
