KEGG   Bubalus kerabau (carabao): 129648614
Entry
129648614         CDS       T11435                                 
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
  KO
K05211  glutamate receptor ionotropic, NMDA 2C
Organism
bke  Bubalus kerabau (carabao)
Pathway
bke04020  Calcium signaling pathway
bke04024  cAMP signaling pathway
bke04080  Neuroactive ligand-receptor interaction
bke04082  Neuroactive ligand signaling
bke04713  Circadian entrainment
bke04720  Long-term potentiation
bke04724  Glutamatergic synapse
bke05010  Alzheimer disease
bke05014  Amyotrophic lateral sclerosis
bke05017  Spinocerebellar ataxia
bke05020  Prion disease
bke05022  Pathways of neurodegeneration - multiple diseases
bke05030  Cocaine addiction
bke05031  Amphetamine addiction
bke05033  Nicotine addiction
bke05034  Alcoholism
Brite
KEGG Orthology (KO) [BR:bke00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    129648614 (GRIN2C)
   04024 cAMP signaling pathway
    129648614 (GRIN2C)
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    129648614 (GRIN2C)
   04082 Neuroactive ligand signaling
    129648614 (GRIN2C)
 09150 Organismal Systems
  09156 Nervous system
   04724 Glutamatergic synapse
    129648614 (GRIN2C)
   04720 Long-term potentiation
    129648614 (GRIN2C)
  09159 Environmental adaptation
   04713 Circadian entrainment
    129648614 (GRIN2C)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    129648614 (GRIN2C)
   05014 Amyotrophic lateral sclerosis
    129648614 (GRIN2C)
   05017 Spinocerebellar ataxia
    129648614 (GRIN2C)
   05020 Prion disease
    129648614 (GRIN2C)
   05022 Pathways of neurodegeneration - multiple diseases
    129648614 (GRIN2C)
  09165 Substance dependence
   05030 Cocaine addiction
    129648614 (GRIN2C)
   05031 Amphetamine addiction
    129648614 (GRIN2C)
   05033 Nicotine addiction
    129648614 (GRIN2C)
   05034 Alcoholism
    129648614 (GRIN2C)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:bke04040]
    129648614 (GRIN2C)
Ion channels [BR:bke04040]
 Ligand-gated channels
  Glutamate (ionotropic)
   129648614 (GRIN2C)
SSDB
Motif
Pfam: Lig_chan Lig_chan-Glu_bd ANF_receptor SBP_bac_3 NMDAR2_C AliA_AliB WIR1
Other DBs
NCBI-GeneID: 129648614
NCBI-ProteinID: XP_055431049
LinkDB
Position
4:complement(7738533..7749596)
AA seq 1227 aa
MGVALGLALLLTSLLGAWAGLGPGQGEQTVTVAVVFGSSGSPQAQARTRLTPQSFLDLPL
EIQPLSVGVNNSNPSSLLTQICGLLGAARVHGIVFEDNVGTEAVAQILDFISSQTHVPIL
SISGGSAVVLTPKESGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAITDASYLSWRLLDVLTLELGPGGARQHTQRLLRQLDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPSLALGSTDTPPAAFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HGYRRQHGALPAPAGDCRAHHGPLSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGVLHMKYPVWPRYSASLQPVVDSRHLTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRQSNHTFSSGDAAPYTKLCCKGFCIDILKKLARVVRFSYDLYLVTN
GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNG
TVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKRSGGPSFTIG
KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV
SGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKM
GKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQF
LGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVY
WKLRHSVPNTSRLDFLLAFSRGIYSCFSGVQSLASPAHPPSPDLTAGSAHASVLKMLQAA
RDMVTTAGVSSSLDRATRTIESWGGGRPAPPPPACPGPRPPTPGPPREPSPTGWRPPGGG
RAALGRRAAQPSGRPPTPRPALPDVSREASRRAWEARWPLRPGRRGRRFSASERRALPER
PLSPERGHYSSFPRADRSGRPFLPLFPEPPEPEDLPLLGPEQLARREALLRAAWVRGSRP
RHASLPSSVAEAFTRPSSGPARCARPACGRLIPAQSMRLPSYREACQEGLWAGPPAWPHG
QHACLHAHAHLPLCWGVVCSHLPPCAAHGPWLPGTWGLPGHRDRTLGLSPEYSNSGELEG
VSRAACGTHGFPRPCTWRRISSLESEV
NT seq 3684 nt   +upstreamnt  +downstreamnt
atgggggtggccctgggcctggccctgctgcttacctcactccttggggcctgggcaggg
ctgggccctgggcagggagagcagactgtgacggtggccgtggtgtttggcagctcgggg
tccccgcaggcccaggcccgtacccgcctcaccccccagagcttcctggacttgcccctg
gagatccagccgctgagtgtgggcgtcaacaactccaaccccagcagtctcctcacccag
atctgcgggctcctgggggctgcccgcgtccatggcatcgtctttgaggacaacgtgggc
actgaggccgtggcccagatcctggacttcatctcctcccagacccacgtgccaatcctc
agcatcagtgggggctctgctgtggtcctcacccccaaggagtcgggctccgccttcctg
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggagtat
gactggagcgccttcgccgtgatcaccagcctgcaccccggccacgctctcttcctcgag
ggcgtgcgcgccatcaccgacgccagctacctgagctggcggctgctggacgtgctcacg
ctggagctgggccccggaggggcgcgccagcacacccagcgcctactgcgccagctcgac
gccccggtgctggtggcctactgctcgcgcgaggaggccgaggtgctcttcgccgaggcg
gcgcaggctggcttggtggggcccgggcacgtgtggctggtgcccagcctggcgctgggc
agcaccgacacgccccctgccgccttccccgtgggcctcatcagtgtcgtcaccgagagc
tggcgcctcagcctgcgccagaaggtccgagacggcgtggctatcctggccctgggcgct
catggctaccggcgccagcacggtgcgctgcccgccccggctggggactgccgcgcccac
catgggcccctcagccctgcccgggaggccttctacaggcacctgctgaatgtcacctgg
gagggccgggacttttccttcagccctggtgggtacctggtccagcccaccatggtggtg
attgccctcaaccggcaccgcctttgggagatggtggggcgctgggaccacggcgtcctg
cacatgaagtaccccgtgtggcctcgctacagtgcctccctgcagcccgtggtggacagc
cggcacctgacggtggccacgctggaggagcgaccctttgtcatcgtggagagccccgac
cctggcacaggcggctgcgtgcccaacactgtgccctgccgccggcagagcaaccacacc
ttcagcagcggtgacgcggccccctacaccaagctttgctgtaagggcttctgcatcgac
atcctcaagaagctggccagggtggtcaggttctcctacgacctgtacctggtgaccaac
ggcaagcatggcaagagggtgcgcggtgtgtggaacggcatgattggggaggtgtactac
aagcgggcggacatggccattggctccctcaccatcaatgaggagcgctctgagattgtg
gatttctccgtgcccttcgtggagacgggcatcagcgtgatggtggcccgcagcaacggc
accgtctccccctcggccttcctggagccctacagccctgccgtgtgggtcatgatgttc
gtcatgtgcctcacggtagtggccatcactgtcttcatgttcgagtacttcagccccgtc
agctacaaccagaacctcaccagcggcaagaggtctgggggcccgtccttcaccatcggc
aagtccgtgtggctgctctgggcgctggtcttcaacaactcggtgcccatcgagaacccc
cggggcaccaccagcaagatcatggtgctggtgtgggcgttcttcgccgtcatcttcctc
gccagctacactgccaacctggccgccttcatgatccaggagcagtacatcgacaccgtg
tctggactcagtgataagaagttccagcggccacaggatcagtacccgcccttccgcttt
ggcacggtgcccaacggcagcacggagcggaacatccgcagcaactaccgcgacatgcac
acccacatggtcaagttcaaccagcgctcggtggaggatgcgctgaccagcctcaagatg
gggaagctggacgccttcatctatgacgccgctgtcctcaactacatggcgggcaaggac
gagggctgcaagctggtcaccatcggctctggcaaggtctttgccaccactggctatggc
atcgcaatgcagaaggactcccactggaagcgggccatagacttggcgctcctacagttc
ctgggagatggggagacccagaagctggagacggtgtggctctctgggatctgccagaat
gagaagaacgaagtgatgagcagcaagctggacatcgacaacatggcgggcgtcttctac
atgctgcttgtggccatggggctggccctgctggtctttgcctgggagcacctggtctac
tggaagctgcgccactccgtgcccaacacgtcccggctggacttcctgctggccttcagc
aggggtatctacagctgcttcagcggcgtgcagagcctggccagccccgcgcacccgccc
agccccgacctcacagccggctcggcccacgccagcgtgctcaagatgctgcaggcggcg
cgcgacatggtgaccacggcaggggtgagcagctccctggaccgcgccacgcgcaccatc
gagagctggggcggcggccgccctgcgcccccgccgcccgcctgccccggcccgcggccg
cccaccccgggtcctccccgcgagccgagccccacgggctggaggccgccgggcgggggc
cgcgccgcgctggggcgcagggccgcgcagccctcgggccgccccccgacgccccggccc
gccctccccgacgtctcccgggaggcgagccggcgggcctgggaggcgcggtggccgctg
cggcccgggcgccgcgggcggcgcttttcggcctccgagcggcgtgcgctcccggagcgt
cccctgtcgcccgagcgcggccactacagctccttccctcgcgccgaccggtccggacgc
cccttcctgccgcttttcccggagcccccggagcccgaggacctgccgctgctcgggccg
gagcagctggctcggcgggaggccctcctgcgcgcggcctgggtccgggggtcacgccct
cgccacgcgtctctgcccagctcggtggccgaagccttcactcggccaagttctgggccc
gctcggtgtgcccgcccggcctgcgggcgcttgataccggcgcagtccatgcggctgccg
tcttaccgcgaggcctgccaggaggggctgtgggccgggccccccgcctggccgcacgga
cagcacgcctgcctccacgcccatgcccacctgccgctctgctggggagttgtctgctct
cacctcccaccctgtgccgcccacggcccctggctccccgggacctgggggcttccgggg
cacagggacaggaccctggggctgagcccagaatacagcaacagtggggaactggaaggg
gtcagcagggcggcctgtgggacccacggctttccacggccttgcacctggaggcggatc
tccagcttggagtcagaagtgtga

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