Bubalus kerabau (carabao): 129648695
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Entry
129648695 CDS
T11435
Symbol
TMC6
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
129648695 (TMC6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bke02000
]
129648695 (TMC6)
03037 Cilium and associated proteins [BR:
bke03037
]
129648695 (TMC6)
Transporters [BR:
bke02000
]
Other transporters
Pores ion channels [TC:
1
]
129648695 (TMC6)
Cilium and associated proteins [BR:
bke03037
]
Other cilia and associated proteins
Stereociliary proteins
129648695 (TMC6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
129648695
NCBI-ProteinID:
XP_055431224
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All DBs
Position
4:complement(10272278..10290132)
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AA seq
811 aa
AA seq
DB search
MSQSPAFVLNVLETPEDPEGSQEPSPYDESEVHDSFHQLIQEQSRWVAEEGLELQQRQPG
TGALGASGSDHETMLGPEGAPVYSMATLRILASMPSRTIGRSRGAIISQYYSRTVKLRRR
AGRPQLRDMGRSARPSLRLYDLELDSAVLEEEEKRGLLVKELQGLTAAQRDHMLRGMPLS
LAEKRCLREESRPPRGKHRAQRHHGLLSCCDQLRDSCVLASHNLGLALLSGLQALMPWRY
ALKRIGGQFGSSVLSYFLFLKTLLAFNALLLLPLLAFIVGVQAAFPPAPAGPVPAFTGLE
LLTGGGHFTHSVMYYGYYSNATLNQPCASPLDGSQCTPEAGSLPYSMPLAYLFTLGAAFF
ITCITLVYSMSHSFGESYRVGSTSGVHAITVFCSWDYKVTQRWATRLQHDNIRTQLKELL
AEWQSRQHRRSACGQLRRVAVLGLVWLLCLGTTLGCTLAVYTFSELMIKSPVSAEREAVL
LLLPLVVCLLNLGGPYLFRILAALERHDSPVLEVYVAICRNLILKMVTLGILCYHWLGRR
VGTLKDQCWENFVGQELYRLMVMDFIFTLLDTLLGELVWRLFSEKQLKRKGKPEFDIAGN
VLELIYGQTLTWLGVLFSPLLPAMQIIKLLLLFYIKKASLMANCQAPRRPWKASHMSTVF
ISLLCFPSFLGAAVFLCYAVWQVKPSSTCGPFRTLDTMYEAGKVWVRRLEKAGPRVSWLP
WIHRYLVEDTFPIYLVSALLLAVIYLNIQVVKGQRKVICLLKEQISNEGEDKIFLINKLQ
RVYERKERSRAGRTEEAVTPPALFADGWDAQ
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtcgccggcctttgtcctcaatgtcctcgagaccccagaggacccagagggc
agccaagagcccagcccctatgatgagagcgaagtgcatgactccttccaccagctcatc
caggagcagagccgctgggtggccgaggaggggctggagctgcagcagaggcagccggga
actggcgccctgggggcctcaggcagcgaccacgagaccatgctggggcctgagggtgcc
cccgtctacagcatggccacgctccgcatcttggccagcatgcccagtcgcaccattggc
cggagccgtggggccatcatctcccagtactacagccgcacggtgaagctgcgtcgcagg
gccggccggccgcagctcagggacatgggccgctcagcccggcccagcctccgcctgtac
gacctggagctggactctgcggtcctggaggaggaggagaagcggggcctcctggtgaag
gagctccagggcctgacagcggcccagagggaccacatgcttcgggggatgcccctgagc
ctggctgagaaacgctgcctgcgggaggagagccggcccccgaggggcaagcacagggcc
cagcggcaccatgggctcctctcctgctgcgaccagctccgtgacagctgtgtcctggcc
tcacacaacctggggctggcgctgctctcggggctgcaggccctgatgccctggcgctac
gccctgaagcggatcgggggccagtttggctccagcgtcctgtcctacttcctcttcctc
aagaccctgctggccttcaacgccctgctgctgctgccgctgctggccttcatcgtgggc
gtgcaggccgccttcccgcccgcacccgcgggcccggtgcccgccttcacgggcctggag
ctcctcaccggcgggggccacttcacccacagtgtcatgtactacggctactacagtaac
gccacgttgaaccagccttgtgcctccccactggatggcagccagtgcactcccgaggcg
ggcagcctgccctacagcatgccgctggcctacctcttcaccctgggggcagctttcttt
atcacctgcatcactctggtctacagcatgtcccactccttcggggagagctaccgagtg
ggcagcacctcgggggtccacgccatcaccgttttctgttcctgggactacaaagtgacc
cagagatgggccacccggcttcagcacgacaacatccgaacccagctgaaggagctgctg
gctgaatggcagtcgcgccagcaccgccggagtgcgtgcgggcagctgcgacgggtggct
gtgctggggctcgtgtggctgctgtgtctgggcaccactctgggctgcaccctggctgtc
tacacgttctcggagctcatgatcaagagcccagtgtccgccgagcgggaggctgtcctg
ctgctcctgcccctggtggtttgcctcctcaacctggggggcccctacctgttccgcatc
ctggctgccctggagcggcacgactccccggtgctggaggtgtacgtggccatctgcagg
aacctcatcctcaagatggtcaccttggggattctttgctaccactggctgggccgcagg
gtgggcaccctgaaggaccagtgctgggagaacttcgtgggccaggagctgtaccggctc
atggtgatggacttcatcttcacgctgctggacacgcttctgggggagctggtgtggagg
cttttctctgagaagcagcttaagaggaaggggaagcctgagttcgacattgcaggaaat
gttctggagctgatttacgggcagaccctgacttggctgggggtcctcttctccccgctc
ctgcccgccatgcagatcattaaactgctgctcctcttctacattaagaaggccagcctg
atggccaactgccaggcgccccgcaggccctggaaggcgtcccacatgagcaccgtcttc
atctccctgctctgcttcccctccttcctgggcgcagccgttttcctctgctacgctgtc
tggcaggtgaagccctcaagcacctgtggccccttccggaccctggacaccatgtatgag
gcggggaaggtgtgggtgcgccgcctggagaaggcgggcccccgcgtctcctggctgccc
tggatccaccgctacctggtggaagataccttccccatctacctggtgtcagccctgttg
ctggctgtgatctacctcaacatccaggtggtgaagggccagcggaaggtcatctgcctc
ctcaaggagcaaatcagcaacgagggggaggacaaaatcttcttgatcaacaagcttcag
cgtgtctacgagaggaaggagaggagcagggctggtagaaccgaggaggccgtgacaccc
ccagccctgttcgcagacggctgggatgcccagtaa
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