Bubalus kerabau (carabao): 129648718
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Entry
129648718 CDS
T11435
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X1
KO
K27412
PCNA-interacting partner
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bke03400
]
129648718 (PARPBP)
DNA repair and recombination proteins [BR:
bke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
129648718 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
129648718 (PARPBP)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
PARI_N
UvrD_C
Motif
Other DBs
NCBI-GeneID:
129648718
NCBI-ProteinID:
XP_055431272
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Position
1:complement(56128189..56196063)
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AA seq
580 aa
AA seq
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MAGLNQKSILDMIKEFRRNWHTLCNSERTTVCGADSMLLALQLSMAENNKQHSGEFTVSL
SDIILTWKYFLHEKLNLPVENIKVIDHYEDIRKIYDDFLKNSNMLDLIDVYKKCSDLTSN
CENYANISPSRLLDFLSGREYAVDDETDFSEPVSPMSKHNQENEKVQLLAKKIIYSYLNL
LVNSKNDLALAHILNIPDRGLGREAFTDLKHAAREKQMSIFLVATSFIRTIELGGKGYAP
SPCDPLRAHIKGLSNFINFIDKLDEILGEVSNPSIAGGRILSVIKMQLIKGQNSRDPFYK
AVEEVAQDLDLRIKNIINSQQGDVALSTTDISPARPKSHTINHGTAYCGRDTVKALLVLL
DEEAASAPTKNKAELLYDDENTIHPNGTSVLTLFRSPTQVDNSPMKPLRERIRKSMEEKK
IKTKQTSIRSQFACTYKDDCMISKDKWNNVNSASKPLCVLHMENDLSEGVNSSVGRPTIG
TSSGNVHLGRSEKEIVARKSSSLTGNTSSKRKQVDLDDENILCDNGNEPLQHKIVKIRKT
SKDLQNKLDGKLLRVAKNNRCTTKDKLITGQTKLTQFFRL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggctgggctgaatcagaagtctatcttggatatgattaaagagttcagaaggaactgg
cacactctttgtaactctgagagaactactgtgtgtggtgcagactccatgctcttggca
ttgcagctttccatggcagagaacaacaaacagcatagtggagagtttacagtctctctc
agtgatatcatattgacctggaaatactttctacatgagaaattaaacttaccagttgaa
aatataaaagtgattgaccattatgaggacatcaggaagatttatgatgatttcttaaag
aatagtaacatgttagatctgattgatgtttataaaaaatgtagtgatttgacttctaat
tgtgaaaattatgcgaacatatctcctagtcgcctattggattttctgtctggcagagag
tatgcagtagatgatgagactgatttttctgaaccagtatcaccaatgagtaaacacaac
caggaaaatgaaaaggtacagttactagcaaagaaaattatctactcatatttaaacctg
ctagtgaattcgaagaatgacttggctctggctcatattctcaatattcctgatagagga
cttggaagagaagccttcactgatttgaaacatgctgctcgagagaaacagatgtctatc
tttttggtggccacatcgtttattagaaccatagagcttggagggaaaggatatgcacca
tcaccatgtgatcctttaagggcacatataaaaggattgtctaattttattaatttcatt
gacaaattagatgaaattcttggagaagtctcaaatccaagcattgcggggggtcggata
ctctcagtgataaagatgcagctgattaaaggccagaacagcagggatcctttttataaa
gcagtagaggaagtggctcaagatttggatttgaggattaaaaatattatcaattctcaa
caaggagatgtagctcttagtaccactgacatcagtcctgcacggccaaaatctcatacc
ataaaccatggcactgcatactgtggcagagatactgtgaaagctttactagttcttttg
gatgaagaagcagccagtgctcctaccaaaaacaaagcagagcttttgtatgacgatgaa
aacacaattcatcctaatggaacttctgttcttacactttttcgatctcccacacaagtg
gataattcaccaatgaaacccttaagagaacgcatccgtaagtcaatggaagagaaaaaa
atcaagacgaagcaaacctcaattagatctcagtttgcctgtacttataaagatgactgc
atgataagcaaggataaatggaataatgttaattcagcatcaaagcctttgtgtgttctt
cacatggaaaatgacctttctgaaggtgtaaattcttctgttggaagaccaacaattgga
acaagttctggaaatgttcatctgggcagaagtgaaaaagaaatagtagcaagaaaatca
agtagtctgacaggaaatacaagctcaaaaaggaaacaggtggatttggatgatgaaaat
attctctgtgataatggaaatgaaccacttcaacacaaaattgttaagatacgtaagaca
tcaaaagatttgcagaataaattggatggcaaactactcagagttgcaaaaaacaataga
tgtaccaccaaggacaaattgattactggccagacgaagttgactcagttttttagatta
tga
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