Bubalus kerabau (carabao): 129648916
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Entry
129648916 CDS
T11435
Symbol
UTP20
Name
(RefSeq) small subunit processome component 20 homolog
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bke03009
]
129648916 (UTP20)
Ribosome biogenesis [BR:
bke03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
129648916 (UTP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
DUF7051
Motif
Other DBs
NCBI-GeneID:
129648916
NCBI-ProteinID:
XP_055431710
LinkDB
All DBs
Position
1:complement(56884562..56971453)
Genome browser
AA seq
2782 aa
AA seq
DB search
MKPKPVSHKTENTYRFLTFAERLGNVNIDIIHRIDRTASYDEEVETYFFEGLLKWRELNL
TEHFGKFYKEVIDKCQSFNQLVYHQNEIVQSLKTHLQIKNSYAYQPLLDLVVQLARDLQT
DFYPHFQDFFLTITSILETQDTELLEWAFTSLSYLYKYLWRLMVKDMSNIYSMYSTLLAH
KKLHIRNFAAESFTFLMRKVSDKNALFNLMFLDLDEHPEKVEGVGQLLFEMCKGVRNMFH
SCTEKAIKLILQKLGPVTETEAQLPWILVGETLKNMVKSTALYIYKEHFGIFFECLQESL
LDLHTKVTETNCGESSEQIKRLLETYLILVKHGNGSKITKPIDVCKVLSQTLQTAHLSTS
CRETLLGVVSALILGENVSLPETLIRETIEKVFESNFERRLILDFSEVMFAMKQFEQLFL
PSFLLYIENCFLTNDAAVRDEALAILAKLILNKAAPPTAGSMAIEKYPLLFSQQTVGSYI
RQKTTKSKEGKEQISVLEHLLSIIQSPPNQDTTYLSCSWAALVVLPHIRPLEKEKVIPLV
TYFIESLFMTVDRGSFGKGNLFVLCQAVNTLLGLEESSELLRLVPVERVKNLVLTFPLEP
SVLLLADLYYQRLSLCGCRGPLSEEALMELFPKLQANISTGISKIRLLTIRILNHFEVQL
PELMEDDGLSEHQSVFAILRQAELVPATVNDFREKLLHLRKLRHDVVQSAVPDGPLQEVP
LRYLLGMLYVNFSALWDPVIELISSYAHEMENKQFWKVYYEHLEKAATHAEKELQNDTRD
EEKSIGDANWEQTQEGNVGALYHKQLTLKTDLQERLDHTNFRFLLWRALAKFPERVEPRS
RELSPLFLRFINNEYYPADLQIAPTQDLRRKGRGLAIEEVEEETAARDDDELEEELGPQE
EPAQKKKTRRAAAKQLIAHLQVFSKFSNPRALYLESKLYELYLQLLLHQDQMVQKITLDC
ILTYKHPHILPYRENLQRLLEDRNFKEEIVHFSISEDNTVVKAAHRAELFPILMRILYGR
MKNKTGSKTQGKSASGTRMSIVLRFLAGTQPEEIEIFLDLLFEPVKHFRNGECHTAVIQA
VEDLDLSKVLPLGRQHGILNSLEIVLKNISHLISAYLPKILQLLLCMTATISHVLDQREK
IQLRFINPLKNLRRLGIKMVTDIFLDWESYQFRTEEIDAVFHGVVWPQISRLGSESQYSP
TPLLKLISIWCRNARYFCFLAKQKPGHPECDILTNVFAILSAKNLSEATASLVMEIADDL
LSLPDFEPSEAVLSLPVTGCVYTESADESITIGGRLILPHVPAILQYLSKTTISAEKLKK
KKNRAQVSKELGILSKISKFVKEKEQSSLLITLLLPFLYRGSVAQDTEIDILVTIQNLLE
HCLEPTSFLKPLAKLFSVIKNKLSRQLLCTVFQTLSDFESGLTYITDVVKLNSFDQRHLD
DINFDVRFSAFQTITSYIKEMQTVDINYLIPVMHNCFYNMELGDMSLSDNASMCLMSIIK
KLAALNVTEKEYREIIHRSLLEKLRKGLKSQTETIQQDYTTLLSCLIQTFPNQPEFKDLV
QLTDCHDPEMDFFENMKHIQIHRRARALKKLAKQLMEGKVVLSSKSLQNYIMPYAMAPVF
DEKMLKHENITIAATEVIGAVCKHLSWSAYVYYLKHFIHVLQAGQINQKLGVSLLVIVLE
AFHFDHKTLEEQMRKLQNEEDTTEVIELPEHEAMELEHMDEDEKEDECNKTLSDKNEEPE
NPDPADYEGTAAKESECITKSISFLPRNKEELERTIKNIQGTITGDILPRLHKCLASTTK
RDEEHKLIKSKVVNDEEVVRVPLAFAMVKLMQSLPREVMETNLPSILLKVCALLKNRAQE
IRDIARSTLAKIIEDLGVHYLQYILKELQTTLVRGYQVHVLTFTVYMLLQGLTNKLQVGS
LDSCLDIMIEIFNHELFGAVAEEKEVKQILSKVMEARRSKSYDSYEILGKFVGKDQVTKL
ILPLKEILQNTTSLKLARKVHETLRRIIAGLLVNQEMTAESILLLSYGLVSENLPLLTQK
EKNPATPAPDPRLPPQSCLLLPPTPVRGGQKAVVSKKTNMHIFIESGLRLLHLSLKTSKV
KSSSEHVLEMLDPFVSLLIDCLGSMDVKVITGALQCLIWILRFPLPSIETKAEQLTKHLF
LLLKDYAKLGAARGQNFHLVVNCFKCVTILVKKVKSYQITQKQLQVLLAYAEEDIYDTTR
QATAFGLLKAILSRKLLVPEIDDVMRKVSKLAISAQSEPARVQCRQVFLKYILDYPLGDK
LRPNLEFMLAQLTYEHETGRESALEMIAYLFDTFPQGLLHENCGMFFIPLCLMMVNDDSA
MCKKMASMAIKSLLSKISLEKKDWLFDMVTTWFGAKKRLNRQLAALICGFFAESEGVNFE
RRLGIVLPVIEKEIDPENFTDIMEETEEKAADRLLFSFLTLISKLIKECNIIQFTKPSET
LSKIWSHVHSHLRYPHSWVWLTAAQIFGLLFASCQPEELIRKQHVKKTKMKVSEPVAIRF
LTNDLEQKMKSISLASCHQLHSKFLDQSLGEQVVKNLLFVAKVLYLLEPDSGDKQGDIKE
DTEEQEVLGDGMAGEGVEEHKACADEKEEHSRPATLLWLIQKLSRIAKVEAAYSPRNPLK
RTCIFKFLGAIAMDLGIDKVKPYLPVIIAPLFRELNSTYSEQDPSLKNLSQEIIELLKKL
VGLESFSLAFASVQKQATEKRALRKKRKALEFVTNPDIAAKKKLKKHKNKSEAKKRKIEF
LRPGYKAKRQKSHSLKDLAMVE
NT seq
8349 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaaagccggtttcccacaagaccgagaacacgtatcggtttcttacatttgct
gagcgactggggaatgtgaatatcgacattattcaccggattgatagaactgcaagctac
gacgaggaagttgaaacctacttttttgagggtctgctgaagtggagagaattgaacctg
acggaacactttgggaagttttacaaagaagttattgacaaatgccagtcattcaatcag
ctggtgtatcatcaaaatgagatagttcagagtttgaagactcacctgcaaatcaagaac
agttatgcctatcaaccccttttggatttggttgtacagttggcacgagatctgcagaca
gacttctatccccattttcaggatttttttctgaccatcacctcaatcctggagactcag
gacacggagttgttagaatgggctttcacctctctgtcatatctgtacaagtacctttgg
agactgatggtgaaagacatgtccaatatatacagcatgtatagtacacttctggctcat
aaaaagctacatataagaaattttgctgctgaaagctttacttttttgatgagaaaggtt
tctgataaaaatgcacttttcaatttaatgtttcttgatcttgatgaacatccagaaaaa
gtagaaggcgttggacagttgctctttgaaatgtgcaaaggagttagaaatatgtttcac
tcttgcacagagaaggcaataaagctaattttgcaaaagcttggaccagttacagaaaca
gaagctcaacttccatggattttagttggagaaacactcaaaaacatggtcaaatccact
gcactctatatctacaaggaacattttggaatattctttgaatgtttgcaagaatcactc
ctggatctacatacaaaagtaacagaaactaattgtggtgaaagttctgaacagattaaa
aggttgttagaaacatacctgatacttgtaaaacatggaaatggatcaaagataaccaaa
cccattgatgtttgtaaagtcttgtctcaaacactacaaacagcccatctctctacatct
tgccgggagacactcttgggtgtagtttctgctttgatcctaggcgaaaatgtttccttg
ccagagaccctcatcagagaaaccatagaaaaagtttttgaaagcaactttgaaagacgc
ttaattttggatttttcagaagtcatgtttgctatgaagcagtttgagcagcttttccta
cccagctttctcttgtatattgagaattgcttcctgacgaatgatgctgcagtcagagat
gaagctctggccattttggccaagctcattcttaacaaagcagcacctcccactgctggc
tccatggcgattgagaagtaccctctgcttttctcccagcagacggtgggatcctatata
aggcagaagacgacgaaatccaaggaaggaaaggaacagatctcggtgttggaacatctt
ttatctataattcagtcacccccgaatcaagatactacttacctttcatgttcttgggcg
gcccttgttgtgttacctcatattaggcccctggagaaagagaaggtgataccactagtc
acctacttcatcgagtcactcttcatgactgttgacagagggagctttggaaaaggaaac
ttatttgttctttgtcaagctgtaaatactctgctaggtttggaagaatcttctgaactt
cttcgtttggttcctgtggaacgtgtgaagaacttagtactaacgtttcctttggagccg
tctgtgttgctgttggctgatctctattatcagagattatccttatgtggctgcaggggg
ccactttcagaggaggctttaatggagttatttcccaagttacaagcaaacatttcgact
ggtatatccaagattcgacttttgacaataaggatcctaaaccactttgaggttcagctt
ccggaattaatggaggatgatgggctctcagagcatcagtctgtctttgctatactgcgc
caggcagaactcgtgccagccactgtgaacgatttcagagagaagcttcttcatttgaga
aaactcaggcatgatgtagtgcagtctgcagtccctgatgggccgttacaggaggtgcca
cttcgttatttattaggcatgttgtatgtaaacttcagtgctctctgggatcctgttatt
gaactcataagttcttatgcacatgaaatggaaaataagcagttttggaaagtctactat
gagcatctagaaaaagcagctacacatgctgagaaagaactgcagaatgacacaagagat
gaggagaagtctattggagatgcaaattgggagcagactcaggaaggaaacgttggagct
ctttatcacaagcagttgacattgaaaactgaccttcaggaaagactggaccacaccaat
ttccgttttttgctctggcgagctctggcaaaattcccagaaagggtagagccacggtcc
agggagctttccccacttttcttgagatttatcaacaatgagtattacccagcagatctg
cagattgcaccaacccaggatctgcgaagaaaaggcagagggctggcgatagaggaagta
gaagaggaaactgccgccagagacgatgacgagctggaggaagagctggggccccaagag
gaacccgcacagaagaaaaagacaagaagagctgcggcaaagcagctaattgctcatttg
caagttttctctaagttttcaaatccacgagccttatatctggaatcgaaattatatgag
ctgtatcttcagttgttgctacatcaggatcagatggtacaaaaaataacactggattgc
atactgacatataaacatccacatattctcccttacagggaaaacctacaaagattgctt
gaagacagaaactttaaggaagagatagtgcattttagcatttctgaagataatacagtg
gtgaaagcagcccaccgagcagaactgtttcctattctgatgagaattttgtatggtcga
atgaagaataagactggaagtaaaactcaggggaaatctgcttctggtacccgcatgtcc
atcgtcctgaggttcctggctgggacccagccagaagagatcgagatattcttagacctt
ctatttgagcctgtgaagcacttcaggaacggagaatgccataccgctgtcattcaagca
gtagaagatttagatttgtctaaagttcttcctttgggtcgtcagcatggcatattaaat
agccttgagatagttttgaagaacattagtcacctgatcagtgcatatttaccaaagatt
ctgcagctactgctctgcatgactgcaactatatcacacgtccttgaccaacgagaaaag
atacagctgaggtttattaacccactgaaaaatttaagacgtcttggaatcaaaatggta
actgatatctttttggattgggagtcctatcaattcagaacagaagaaattgatgcagta
tttcatggtgtagtttggccccagatcagcaggcttggatctgaaagtcagtattctcct
actcctctactgaaactaattagtatctggtgcagaaatgcaagatatttctgtttcctg
gctaaacagaaacctgggcacccagaatgtgatatcctgaccaatgtttttgcgattctc
tcagcaaaaaacctctctgaagccacagctagtcttgtgatggaaatagccgacgacctt
cttagccttccagattttgaaccctcagaagcagttttgagcttgccggtgacaggctgt
gtatacacagaaagtgcagatgagtctatcacaataggaggacgattaattctacctcat
gtacctgctattctccagtatctcagcaaaaccacaataagtgcagaaaagctaaaaaag
aagaagaatagagcacaagtcagtaaggaacttggcattctttcaaagatcagcaagttt
gtgaaagaaaaagaacaaagttctctgctcattacactgctcctaccattcctctaccgt
ggcagtgttgctcaggatacagaaattgacattctggtgacaatacaaaacctgttggaa
cattgtctggagcctacaagcttcctcaagcctctagcaaaactcttctcagttattaag
aacaagttgtcaagacagttactttgtacagttttccagaccctttctgattttgagagt
ggattaacatatattactgatgttgtcaagcttaactcctttgatcaaagacatcttgat
gatatcaactttgatgttcgcttctcggcgttccagaccattacctcttacattaaagag
atgcaaactgtagacattaactacctaatcccagttatgcataattgtttctataacatg
gagttaggagacatgtctttaagtgataatgcaagcatgtgcttgatgagtatcatcaaa
aagcttgctgctttgaatgtcacagagaaagaatatagagaaatcattcatcgttctctc
ctggagaaactgaggaaaggattgaagagccagacagagactattcaacaggattatacc
acactgctttcctgtttaattcaaacctttccaaatcaaccagaatttaaagacttggtt
cagcttacagattgccatgatccagaaatggacttctttgagaatatgaagcacattcag
atccacagaagagcaagagccttgaagaaactggcaaaacaactgatggaaggcaaagtc
gtgctgtcttctaaatctcttcagaattacatcatgccttatgctatggcaccagttttt
gatgagaaaatgctcaagcatgaaaatataaccattgctgccacagaagttattggagct
gtttgcaaacatctctcttggtcagcatacgtgtactacttgaaacatttcattcatgtc
ttacaggcgggacagatcaatcaaaagttgggtgtcagtttgctagtgatagtgttagaa
gcattccactttgaccacaaaactcttgaagaacaaatgagaaaacttcagaatgaagag
gataccacagaagtgattgagttgccagagcacgaagccatggaattagagcatatggat
gaggacgagaaggaggatgaatgtaataagactttgtcggacaagaatgaagagccagaa
aaccctgacccagctgattatgaagggacggcggctaaggaatctgagtgtatcacaaag
tccatctccttccttcctcggaataaggaagaattggagagaacaattaaaaatatccaa
ggaaccataactggggacatcctgcccaggctccataaatgcctggcatctacgactaaa
agagacgaagaacacaaactcataaaatcgaaggttgtgaatgatgaggaagtggttcga
gttcctttagcttttgccatggttaaactaatgcagtcccttccaagagaagttatggaa
actaatctgccaagtattttgctgaaagtgtgtgccctcctcaagaacagagcacaggaa
atcagagacattgcacgcagtaccctcgcaaaaataatagaggatctgggtgtgcattat
ctacaatatattttaaaagaattacagactacgcttgtgcgtggctatcaggtccatgtg
ctgactttcactgtctatatgttgctgcaaggccttaccaacaagctacaagtcgggagt
ttggactcttgtttggatataatgattgagatttttaaccatgagttgtttggtgctgtt
gctgaagagaaggaagtaaagcagatcctctccaaggtcatggaggcacgaagaagcaag
agttacgattcttatgaaatcttgggcaagtttgtaggaaaagatcaggttacaaaactt
atccttccactaaaagagatcttgcaaaataccacaagtttaaaactggcccggaaagtt
cacgaaaccttacgccgaatcatagcagggttacttgtaaaccaggaaatgacagcagaa
tccattctgttgcttagttatggtttggtcagcgaaaatctccccctgttaacacagaaa
gaaaaaaatccagcaacccccgcaccagatccacgcctgccaccccagagctgtcttctg
ctccccccaactccagttcgaggcggacagaaagctgtcgtgagcaagaaaaccaacatg
cacatatttattgagtctgggcttcggctattgcaccttagtctgaagacctccaaggtc
aagtcttcaagtgaacatgtcctggaaatgttggatccttttgtgtctctcctcatagac
tgcctgggttccatggacgtgaaggtgatcacaggtgctttgcaatgcctgatctggatc
ttgaggttccccctgccatctatagaaacaaaagcagagcagctgacaaaacaccttttt
cttttgctgaaggactatgcaaaactcggggccgccaggggccagaacttccacctggtg
gtaaactgtttcaagtgtgtgaccatacttgtgaagaaagtgaagtcataccagataact
caaaagcagcttcaggttctactagcgtatgctgaggaggacatctatgatactacaaga
caagccactgcatttggtcttctgaaggccattttatcaagaaagttgttggtcccagaa
attgatgatgtcatgaggaaagtatccaagctggcaatctctgcacaaagcgaacctgcc
agagtccagtgcagacaggtttttctgaaatacattcttgactatcctctgggtgacaaa
ttgcgaccaaacttggaattcatgcttgctcaactgacttatgaacatgagaccgggaga
gagtccgccttggaaatgattgcttatctctttgacacattccctcagggactgctccat
gagaactgtggaatgttctttattcctctttgtctaatgatggtgaacgatgactctgcc
atgtgtaaaaagatggcatccatggcaatcaaatccttactcagtaaaatcagccttgag
aaaaaagattggctcttcgatatggttaccacctggtttggggcaaagaagcgcttaaat
cgacaactagctgccctgatctgtggcttttttgcggagagtgaaggagtcaattttgag
agaagacttggaattgttcttcctgtgattgaaaaggagattgatcctgaaaactttaca
gatatcatggaagagactgaagaaaaagctgcagatcgccttctgttcagttttcttaca
ctgataagtaaactcatcaaggaatgtaatatcattcagtttaccaagccctctgaaact
ctgagtaaaatctggagtcacgtgcactcccacttgagatatccgcacagctgggtgtgg
ctcacagcagcccagatttttggattgctctttgcctcttgccaacctgaggaacttatt
agaaaacagcatgtcaaaaaaactaaaatgaaagtctcggaacctgtcgcaatccgcttc
ctaacaaatgaccttgagcaaaagatgaaaagtatctccctagcctcttgccatcagttg
cactccaaattcttggaccagtctctaggagaacaggttgttaagaacttgttgtttgta
gccaaagtcttatatttactggaacctgattctggggacaagcaaggggacataaaagaa
gacacggaagaacaggaagttttaggtgatggcatggccggagagggtgtggaagaacac
aaggcgtgtgcagatgagaaagaagagcacagcaggccagccacactgctctggctgatc
cagaaattgtcccggatcgcaaaagtggaagctgcgtattcacctagaaaccccttaaag
agaacatgcatctttaaatttctcggagccatagcaatggaccttggaatagacaaggtg
aagccgtacctcccagtgatcatagcgcctttgttccgggaactgaacagcacctattca
gagcaggatccttcactgaagaatctatcccaggaaatcatagaattactgaaaaagctg
gtcgggctcgagagcttctcattagcctttgcctctgtacagaaacaggctactgagaaa
agggcactccggaaaaagagaaaggctttggagtttgtaactaatcctgatattgccgcc
aagaaaaagctgaagaaacacaaaaataaaagtgaagcaaagaagagaaagattgagttc
ctgcgtccaggctataaggccaagagacaaaagagccacagcctgaaagatttagcaatg
gtggaataa
DBGET
integrated database retrieval system
