Bubalus kerabau (carabao): 129648920
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Entry
129648920 CDS
T11435
Symbol
HDAC5
Name
(RefSeq) histone deacetylase 5 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04371
Apelin signaling pathway
bke04613
Neutrophil extracellular trap formation
bke05034
Alcoholism
bke05203
Viral carcinogenesis
bke05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
129648920 (HDAC5)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
129648920 (HDAC5)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
129648920 (HDAC5)
05203 Viral carcinogenesis
129648920 (HDAC5)
09165 Substance dependence
05034 Alcoholism
129648920 (HDAC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bke03036
]
129648920 (HDAC5)
Enzymes [BR:
bke01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
129648920 (HDAC5)
Chromosome and associated proteins [BR:
bke03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
129648920 (HDAC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
TFIIA
Motif
Other DBs
NCBI-GeneID:
129648920
NCBI-ProteinID:
XP_055431711
LinkDB
All DBs
Position
4
Genome browser
AA seq
1143 aa
AA seq
DB search
MNSPTESDGMPGREPALEILPRTPLHSIPVTVEVKPVLPGAMPSSMGGGGGGSPSPVELR
GALAGPVDPALREQQLQQELLALKQQQQLQKQLLFAEFQKQHDHLTRQHEVQLQKHLKVS
VGARAPRPLSPALDSAHLASPLPLQQQQEMLAAKRQQELEQQRQREQQRQEELEKQRLEQ
QLLILRNKEKSKESAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGTHHASLD
QSSPPQSGPPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLL
RRKDGTVISTFKKRAVEITGAGPGVSAVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIP
TEMLPQHRALPPDTSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQ
ALQSLRQGGALTGKFMSTSSIPGCLLGVALEGDSSPHGHASLLQHVLLLEQARQQSTLIA
VPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLE
KQKQQQLQLGKILTKTGELPRQPTTHPEETEEELTEQQDALLGEGALTIPREGSTESEST
QEDLEEEEEEEEEEEEEEEEDCIQVKDEERESGAEEGPDLEESSAGYKKAFADTQQLQPL
QVYQAPLSLATVPHQALGRTQSSPAAPGGMKSPPDQPTKHLFTTGVVYDTFMLKHQCMCG
NTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNR
QKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGE
LKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQ
AFYNDPSVLYISLHRYDNGNFFPGSGAAEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLT
AFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVV
LALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPNINAVATLEKVIEIQSKHWS
CVQRFAAGLGRSLREAQAGETEEAETVSAMALLSVGAEQAQAAAAREHSPRPAEEPMEQE
PAL
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atgaactctcccaccgagtcggatgggatgccaggccgggaaccagccttggaaatcctg
ccccggacccctctgcacagcatccccgtgacagtagaggtgaaaccggtgctgccagga
gccatgcccagctccatggggggcgggggaggaggcagccccagccccgtggagctgcgg
ggggctctggcaggccccgtggaccctgcgctgcgggagcagcaactgcagcaggagctc
ctggcactcaagcagcagcagcaactgcagaagcagcttctgttcgctgagttccagaaa
cagcatgaccacctgacccggcagcatgaagtccagctgcagaagcacctcaaggtgagc
gtgggggccagggcacccagacctctgagccctgccctggactcagctcaccttgcctcc
ccactgcccctgcagcagcagcaggagatgctggcagccaagaggcagcaggagctggag
cagcagcggcagcgggagcagcagcggcaggaggagctggagaagcagcggctcgagcag
cagctgctcatccttcgaaacaaggagaagagcaaagagagtgccatcgccagcactgag
gtgaagctacggctccaggaattcctcctgtcgaagtcaaaggagcccacaccaggcggc
ctcaaccattccctcccacagcatcccaaatgctggggaacccaccatgcttctttggac
cagagttcccctccccagagcggcccccctgggacgcctccctcctacaaactgcctttg
cttgggccctacgacagccgcgatgacttccccctccgcaaaacagcctctgaacccaac
ttaaaagtacgttcaaggctaaagcagaaggtggccgagcggagaagtagtcccctcttg
cgtcgcaaggatgggactgtcattagcacctttaagaagagagctgttgagatcacaggt
gctggacctggggtgtccgccgtgtgtaacagcgcgccaggctctggccccagctctccc
aacagctcccacagcaccatcgcggagaacggctttacgggctcggttcccaacatcccc
accgagatgctcccccagcaccgggccctccctccggacacctcccccaaccagttcagc
ctctacacgtctccctctctgcccaacatctccctagggctgcaggccacggtcactgtc
accaactcgcacctcaccgcctccccgaagctgtcgacgcagcaggaggccgagaggcag
gccctccagtccctgcggcagggcggtgcactgacgggcaagttcatgagcacatcctcc
atccctggctgcctgctgggcgtggccctggagggcgactcgagcccccacgggcacgcc
tcactgctgcagcacgtgctgctgctggaacaagcccggcagcagagcaccctcattgct
gtgccgctccacgggcagtccccgctggtgacaggtgagcgcgtggccaccagcatgcgg
acagtgggcaagctcccgcggcaccggcccctgagccgcacccagtcctcgccgctgccc
cagagcccccaggccctgcagcagctggtcatgcagcagcagcaccagcagttcctggag
aagcagaagcagcagcagctgcagctgggcaagatccttaccaagacgggggagctgcca
cggcagcccaccacccaccccgaggagacagaggaggagctgacggagcagcaggacgcc
ttgctgggggagggagccctgaccataccccgagaaggctccacggagagtgagagcacc
caggaagacctggaggaggaggaagaggaggaggaggaagaggaggaggaggaggaggag
gactgcatccaggtcaaggacgaggagcgcgagagcggtgctgaagaggggcccgacttg
gaggagtctagtgctggttacaaaaaggcatttgcagacacccagcagctgcagccgctg
caggtgtaccaggcacccctcagcctggccactgtgccccaccaggccctgggccgcacc
cagtcctcacctgctgcccctgggggcatgaagagccccccagaccagcccactaagcac
ctcttcaccacaggtgtggtctacgacacgttcatgctgaagcaccagtgcatgtgcggg
aacacacacgtgcaccccgagcacgctggccggatccagagcatctggtcccggctgcag
gagacaggcctgctcagcaagtgtgagcgaatccggggtcgtaaagccacgctggatgag
atccagacggtgcactctgagtaccacacactgctctacggtaccagccccctcaaccgg
cagaagctggacagcaagaagctgctcggccccatcagccagaagatgtatgccatgctg
ccttgcgggggcattggggtggacagtgacactgtgtggaacgagatgcactcctccagc
gccgtgcgcatggcggtgggctgcctggtggagctggcattcaaggtggccgcaggggag
ctcaagaatggatttgccattatccggcccccaggacaccacgcggaggaatccacagcc
atgggattctgcttcttcaactcagtagctatcacaaccaagctcctgcagcagaagttg
aacgtgggcaaggttctcatcgtggactgggacattcaccatggcaatggcacccagcaa
gcattttacaacgatccctccgtgctctacatctccctgcatcgctatgacaacgggaac
ttctttccgggctccggggctgctgaagaggttggcggagggccgggcgtggggtacaat
gtgaacgtggcatggacgggaggtgtggacccccccatcggagacgtggagtacctaacg
gccttcaggacagtggtgatgcccattgcccacgagttctcacctgatgtggtcctggtc
tccgctggctttgatgctgttgagggacacctgtctccgctgggtggctactctgtcacc
gccagatgttttggccacttgaccaggcagctgatgacgctggcagggggccgggtggtg
ctggccctggagggaggccacgacctgaccgccatctgtgatgcctctgaggcctgtgtc
tcggcgctgctcagcgtggagcttcagcccttggacgaggcagtcttgcagcaaaagccc
aacatcaacgcagttgccacgctggagaaagtcatcgagatccagagtaaacactggagc
tgtgtgcagaggttcgctgctggcctaggccgttccctgcgggaggcccaggcaggtgag
acagaggaggctgagactgtgagcgccatggccttgctgtcggtgggggccgagcaggcc
caggcagctgcagcccgggagcacagcccaaggccagcagaggagcctatggaacaggag
cctgccctgtga
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integrated database retrieval system
