Bubalus kerabau (carabao): 129649485
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Entry
129649485 CDS
T11435
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03030
DNA replication
bke03420
Nucleotide excision repair
bke03430
Mismatch repair
bke03440
Homologous recombination
bke03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
129649485 (RPA1)
03420 Nucleotide excision repair
129649485 (RPA1)
03430 Mismatch repair
129649485 (RPA1)
03440 Homologous recombination
129649485 (RPA1)
03460 Fanconi anemia pathway
129649485 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bke03000
]
129649485 (RPA1)
03032 DNA replication proteins [BR:
bke03032
]
129649485 (RPA1)
03400 DNA repair and recombination proteins [BR:
bke03400
]
129649485 (RPA1)
Transcription factors [BR:
bke03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
129649485 (RPA1)
DNA replication proteins [BR:
bke03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
129649485 (RPA1)
DNA repair and recombination proteins [BR:
bke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
129649485 (RPA1)
MMR (mismatch excision repair)
129649485 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
129649485 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129649485
NCBI-ProteinID:
XP_055432925
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Position
4:complement(41419980..41468608)
Genome browser
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAAIMQQGDTSIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEERLSSNCICQINRFIVNTLKDGRRVVILMELEVLKSAEAVGSKIGNPMPYNE
GHGQQPVVPPPVSAASPPTSRPQQQNGSPGVASTASKAFGASKTFGKAGGTSQVNSSGGT
QAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QADKFFPLIDVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDGHHLPTVQF
DFTGIDDLESKSKDSLVDIIGICKNYEDVTKIIVKSNNREVSKRNIYLMDMSGKVVNATL
WGDDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGISISDLKSGGAGGSNTNWKTLYEVKSENLGQGDKPDYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPNFKYRMILSVNIADFQENQWVTCFQESAEAIL
GQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVVDVKPVDYR
EYGRRLVMNIRRNAAM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggccatcatgcaacagggagatacatct
ataaaacccatcctccaagtcattaacatccgtcccattactacagggaatagtccaccc
cgttatcgactgcttatgagtgatggattgaatactctatcttcgttcatgttggcaaca
cagctgaaccctcttgttgaggaagagcgattgtctagcaactgtatttgccagattaac
cgatttattgtgaacacgctgaaagatggaaggagagtggttattttgatggagttagaa
gttttgaaatcagctgaagcagttggatcaaagattggcaacccaatgccttataatgaa
ggacatggacagcagccagtagttcctcctcctgtctcagcagccagtccaccaaccagc
aggccccagcaacagaatgggagcccaggagtggcttccactgcatctaaggcttttggt
gcctcaaagacatttggaaaagctggcggtaccagccaagtgaacagctctgggggaaca
caggccaaagtggtacccattgccagcctcaccccgtaccaatccaagtggactatctgt
gctcgtgtcaccaacaaaagtcagatccgtacctggagcaactcccgaggggaagggaag
cttttctccatagaactggttgatgagagtggtgaaatcagagcgactgctttcaatgag
caagcggacaagtttttcccccttattgacgtgaacaaggtctattacttctctaaaggc
accctgaagatcgccaacaaacaattcacagccgtcaaaaacgactatgagatgaccttc
aacaatgagacttctgtcatgccctgtgaagacggtcatcacttacccacagttcagttt
gatttcacagggattgacgacctggagagcaaatctaaagactcgcttgtagacataatc
gggatctgcaagaactacgaagatgtcacaaaaatcatagtaaagtctaacaacagagaa
gtctcgaagagaaatatctatctgatggatatgtcagggaaagtggtgaacgctaccctg
tggggagacgatgctgataaatttgatggttctagacaacctgtgatggccatcaaagga
gccagagtttctgattttggtggacggagcctctctgtcctatcttcaagcaccatcatt
gtgaaccctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggcatttccatctctgatctaaagagtggaggagcaggtgggagcaatacc
aactggaaaactttatatgaggtcaagtcggagaacctgggccaaggtgacaagcctgac
tattttagctctgtggcaactgtggtgtatcttcgcaaagagaactgtatgtaccaggcc
tgcccaactcaggattgtaacaagaaagtgatcgaccagcagaacggattgtaccgctgc
gagaagtgtgacagtgaattccccaatttcaagtaccgcatgatcctgtcagtcaatatt
gccgattttcaagagaatcagtgggtcacatgtttccaggagtctgcagaggccatcctt
ggacaaagcactgcttatcttggagaattaaaagagaagaacgagcaagcatttgaggaa
gttttccagaatgccaactttcgatcttttacgttcaggatcagggtcaaactggagacc
tacaatgatgagtctcgaattaaggccacggtggtggacgtgaagcctgtggactacaga
gaatacggcagaaggctggtcatgaacatcaggagaaacgcggcgatgtga
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