Bubalus kerabau (carabao): 129649511
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Entry
129649511 CDS
T11435
Symbol
VPS53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bke04131
]
129649511 (VPS53)
Membrane trafficking [BR:
bke04131
]
Protein recycling
Others
EARP complex
129649511 (VPS53)
Endosome - Golgi transport
Tethering complex
GARP complex
129649511 (VPS53)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
FBF1
Sec8_N
DUF8042
Tropomyosin
hAT-like_RNase-H
GbsR_C
Syndetin_C
NBD94
TPR_CAND1
COG3_N
IFT74
COG5_N
WHD_1st_NFRKB
Motif
Other DBs
NCBI-GeneID:
129649511
NCBI-ProteinID:
XP_055432970
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All DBs
Position
4:complement(42117562..42242465)
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AA seq
832 aa
AA seq
DB search
MMEEEELEFVEELEAVLQLTPDVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRRRQYGEVANLLQG
VMNVLEHFHKYMGIPQIRQLSERVKAAQTELGQQILADFEEAFPSQGTKRPGGPSNVLRD
ACQVANILDPRIKQEIIKKFIKQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPREWYMAERIAVEFCHITRTELAKIMRTRAKEIEVKLLLFAIQRTTNFEGFLAK
RFSGCTLTDGMLKKLESPPASTNPFLEDEPAAEMEELAMEKGDLEQPKKPKAPDNPFHGI
VSKCFEPHLYVYIESQDKNLGELIERFVADFKAQGPPKPNMDEGGAVLPSCADLFVYYKK
CMVQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTSSSGGLTISSLLKEKEGSE
AAKFTLEELCLICSILSTAEYCLATTQQLEEKLKEKVDVSLTERINLTGEMDTFSTVISS
SIQLLVQDLDAACDPALTAMSKMQWQNVEHVGDQSPYVTSVILHIKQNVPIIRDNLASTR
KYFTQFCIKFANSFIPKFITHLFKCKPISMVGAEQLLLDTHSLKMVLLDLPSIGSQVVRK
APASYTKIVVKGMTRAEMILKVVMAPHEPLVVFVDNYIKLLTDCNTETFQKILDMKGLKR
SEQSSMLELFRQRLPAPPSGPEGSSSLSLLAPTPEQESSRIRKLEKLIKKRL
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggaggaggaactggagttcgtagaagagctggaagccgtgctgcagctcacg
cccgacgtgcagctcgccatcgagcaggtatttccaagccaggatcctctagatcgagca
gatttcaatgctgtggagtatatcaacaccctgttcccaacagagcaatctctggcaaac
attgatgaagtcgtgaacaagattagactgaaaataaggagactggatgacaacattcga
actgtcgtaagaggtcaaacaaatgtgggacaggatggcaggcaagcacttgaagaggcc
cagaaagcaatacagcagctttttggaaaaatcaaagatatcaaagacaaagcagaaaaa
tcagagcaaatggtgaaggaaatcacccgcgacattaagcagttagatcacgccaaacgc
cacctgaccacctcaatcacaacgctgaaccacctgcatatgctggcgggtggcgtggat
tccctcgaagccatgaccaggcgaaggcagtacggagaagttgctaatcttcttcagggc
gtaatgaatgttctggagcacttccacaaatatatgggcattccacagatccggcagctt
tctgaaagagtgaaggcggcccagactgagttaggacagcaaatcctggccgattttgaa
gaagcttttccttcccagggcacgaagaggccaggaggacccagcaacgttctacgagat
gcatgtcaggttgctaacatcttggaccccagaatcaaacaggaaatcatcaaaaagttt
attaaacagcatctgtcagagtacctagtactttttcaagaaaaccaagatgttgcctgg
ctggacaaaatcgaccgtcgctatgcctggatcaaacgccagctcgtggactacgaggag
aaatatggccggatgttcccacgtgagtggtacatggcggagagaattgccgtagaattt
tgccacatcacaaggacagaacttgccaagatcatgcgtacaagagcaaaggaaattgaa
gtgaaattgcttctctttgctattcagagaacgactaactttgagggatttcttgcaaaa
cgtttttccgggtgcaccctgacagatggaatgctgaaaaaacttgaatctccacccgca
tccaccaatcccttcctggaagatgagccagcagcagagatggaggaactggcaatggag
aaaggagatttagagcaacctaagaagcctaaagccccagacaatccatttcacggcatt
gtttccaagtgttttgagccgcatctctacgtgtacattgagtcccaggacaaaaacctt
ggagagctgatagaacggtttgtggccgatttcaaggcccagggcccacctaagcccaat
atggacgaggggggtgccgtgctccccagctgcgccgacctcttcgtctactacaagaag
tgcatggtgcagtgctcgcagctcagtaccggggagcccatgatcgccctgaccactatt
ttccagaagtacctccgcgagtatgcctggaaaatcctctctggcaacctgcccaaaacc
acaagcagcagtggcgggctgaccatcagcagcctgctcaaggaaaaggagggctccgag
gcagccaagttcaccctggaggagctctgcctcatctgcagcatcctgagcaccgccgag
tactgcctggccaccacccagcagctggaagagaaactcaaggagaaggtcgacgtgagt
ctgactgaacgaatcaatctgactggagaaatggacacgttcagcactgtcatctccagc
agcattcagctgttggttcaggacctggatgctgcctgcgaccccgcccttacggccatg
agcaagatgcagtggcagaacgtggagcacgttggtgaccagagcccctacgtcacgtcg
gtcatccttcacattaaacagaacgtccccatcatccgcgacaacctggcctccacgcgg
aagtacttcacgcagttttgcattaaatttgcaaactccttcattccgaagttcatcacc
cacctcttcaagtgcaagccgatcagcatggtgggggcagaacagctactgctggacaca
cactccctgaagatggtcctgcttgatctgccttccatcggctctcaggtggtgaggaaa
gccccggccagttacaccaagatcgtggtgaaaggcatgacccgcgcggagatgatcctc
aaggttgtgatggcccctcacgagccgttggtggtatttgtggacaattacatcaagctc
ctgacagactgcaacacagaaaccttccagaagattctggacatgaaggggctgaagcgg
agtgagcagagcagcatgctggagctcttccgccagaggctccccgccccgccctcagga
cccgaaggctccagctccctgtccctcctggctccaactccagaacaggagtcctcgcgc
atccgcaaactggagaaactgattaaaaagagactgtag
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