Bubalus kerabau (carabao): 129649749
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Entry
129649749 CDS
T11435
Symbol
SRSF1
Name
(RefSeq) serine/arginine-rich splicing factor 1 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03040
Spliceosome
bke04657
IL-17 signaling pathway
bke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129649749 (SRSF1)
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
129649749 (SRSF1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129649749 (SRSF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bke03041
]
129649749 (SRSF1)
Spliceosome [BR:
bke03041
]
Common components
Common spliceosomal components
SR proteins
129649749 (SRSF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
DDE_Tnp_1
Motif
Other DBs
NCBI-GeneID:
129649749
NCBI-ProteinID:
XP_055433516
LinkDB
All DBs
Position
4:55696667..55700456
Genome browser
AA seq
248 aa
AA seq
DB search
MSGGGVIRGPAGNNDCRIYVGNLPPDIRTKDIEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGTGRGGGGGGGGGAPRGRYGPPSRRSE
NRVVVSGLPPSGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKF
RSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPR
HSRSRSRT
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaggtggtgtgattcgtggcccggcagggaacaacgactgccgcatctacgta
gggaacttacctccagacatccgaaccaaggacattgaggacgtgttctacaaatacggt
gctatccgcgacatcgacctgaagaatcgccgcggaggaccgcccttcgccttcgttgag
ttcgaggacccgcgggatgcggaagacgcggtgtacggtcgcgacggctatgattacgat
ggatatcgtctgcgggtggagtttcctcgaagcggccgtggtacaggccgaggcggcggc
gggggtggaggtggcggggctccccggggccgctatggccccccatccaggcgttctgaa
aacagagtggttgtctctggactgcctccaagtggaagctggcaggatttaaaggatcac
atgcgtgaagcaggtgatgtatgttatgctgatgtttaccgagatggcactggtgtcgtg
gagtttgtacggaaagaagatatgacctatgcagttcgaaaactggataacactaagttt
agatctcatgagggagaaactgcctacatccgggttaaagttgatgggcccagaagtcca
agttatggaagatctcgatctcgaagccgtagtcgtagcagaagccgtagcagaagcaac
agcaggagtcgaagttattccccaaggagaagcagaggatcaccacgctattctccccgt
catagcagatctcgctctcgtacataa
DBGET
integrated database retrieval system
