Bubalus kerabau (carabao): 129650160
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Entry
129650160 CDS
T11435
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bke04131
]
129650160 (VPS13A)
Membrane trafficking [BR:
bke04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
129650160 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
129650160
NCBI-ProteinID:
XP_055434339
LinkDB
All DBs
Position
4:119812040..120078105
Genome browser
AA seq
3173 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLSLGIWAGAVALKNLEIKENALSQLDVPFKIKVG
HIGTLNLIIPWKNLYTQPVEAVLEGVYLLIVPSSRIKYDPIKEEKQLFEAKQQELKRIEE
AKRKVADQEKQHVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDVTNRENPLSFGISLQ
NLSMQTTDQYWIPCLHDETEKLFRKLIRLDNLFAYWNVKTQLFYLSNYDESLSSLRNGIV
DENIVPEGYNFVFRPISANAKLQMNRRSDFDFSAPKIDLDVELHDITIELNKPQYFSFME
LLESVDMMTQNLPYRKFKPDVPLHNHAKEWWAYAIRGILEVNIRPHLRMWSWKHIREHRQ
KMKQYKELYKKKLTSKKPSGELLNSLEELEKTLDVFNITIARQQAEVEVKKAGYRIFREG
AEESEGNKGWFSWMWNWSESHSKQQLDIKPGSLEEILTPKEKSLLYEAIGYSETAVDPTL
PKTFEAMKLFVHLKSMSIILREQQQKPELLDIVVEEFSTLIVQRPGAQAVKFETKIDSFH
VTGLPDNSTKPRLLSSLDDAASLLKIMFEINPLDETVAQRCIIEAEPLEMLYDARTVNSI
VEFFRPPKEVNLAQLTSVTLTKLEEFRDKTATGLVYIIETQKVLDLKINLNASYIIIPQD
GIFSPTSNLLLLDLGHLKVTSKIRSELPDLKQGGANREEIMHRAYDSFDIQLTSIQLLFS
RVGDNWKEARKLNVSAQHILVPMHFNVELSKAMVFMDISMPKFKIYGNLPLISLRISDKK
LQGILELIESIPKPSPATEVNEPVKSSQVQRSTSLGTSQMSQKKFPLLEIPCVEDDSDEE
FFDAPCSPLEEPLQSPSRIKSPQQKNLQKPDCFKNMIEYKIRFEVPEVLIQFCHLVGDCE
LPVVEINVLGLGTDIELRTFDLKANAFLKEVCLKCPDYFDENKKPVYLITTLDNTMEDLL
TLEYVKAENNLPATILKNAYNNVVQLIKVNFSSLDIHLHTEALLSTINYFNNILPYLEEK
PAPVHVVETEDKEEVVKKITLKSSKNEDTITLQILAELSCLQIFIQDQKRNISEIKIEGL
DCEIIMRPSVTETNAKLRNIIVLDSDITAVYKKAVYITGKEVFSFKMVSYMGATAGSAYT
DMNVVDMQVNLTVGCIEVVLVKKFLYSILAFIDNFQAGKQALAEATVQAAGMAATGVKEL
AQRSSRMALDVHIKAPVVVIPQSPVSENVFVADFGLITMKNTFHVITKSPTNPPPIIDLI
TIKLSEMRLYRTQYINDAYQEVLDLLLPLNLEVMVERNLSWEWFQEVPCFNLNAQLKPME
FILSQEDITTIFKTLYGNIWYEGDSASHEVAKDQSSVTSGATTASHHAAGTAVVTAAVVE
VHSHAAQVKTALNMSFTTGYLTMVLYSPGPKQTSFTDIRDPSLKLAEFKLENIISTLKMY
TDDSIFSSFSLKNCILDDKRPHIKKATPRMIGLTVGFDKKDMMDVRYRTIRDGWVADIVL
QEMYICASVEFLLTVANVFLEAYTTGTAVETSVQTWPAKEEVPKQQSEKWEMNITIKNPE
IVFVADMTRNDAPALVITTQCEIYWLGDFENDTMTAAIKDLQVRACPFLPVKRKGKITTV
LQPCDLFYQATQISTDPQVLELSVKSLTLKVSPVIINTVITITSALYTAKETIPKETASS
TAHLWEKKDTKDLNMWFLEEPNEAVKRAPMPELVPKGEIIKMNIDSIFLVLEAGIGHRTV
PMLLAKSRFSGEGKNWSSLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNL
GIKMKKKAKKAIVESGTEEENYRVPEYKTVITFYSKDQLNITLSKCGLIMLNNLAEAFTE
AATGSSATFIRDLAPFMILNSLGLSISVSPSESFSVLNIPMAKSYVLKNEESLSMDYMRT
KDNDHFNAMTSLSSKHFFILLTPANHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQID
AVEGSKKVTIRSPVQIRNHFSIPFSVYGGDTLLGTASPGSEFNIPLASYRSLLSLKPEDA
DYQMCEGIDLEEIIKQDGTSFKKKCRPIHPSRKPFIINIVPEKDNLTYMSVYSEDRWDLP
YIIHLWPPILLRNLLPYKIAYYIEGIEHRVFTLHEGRSAQLCTVQLDKARLHLKLLDYLN
HDWKSEYHIKPNQQDISFISFTCVTEIEKTDLDIAVHVTYNTGQTIMAFHSPYWMVNKTG
RMLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGA
VKCKGPKMEYQVGVTIDLSSFNITRIVTFTPFFLIKNKSKYHISVAEEGNDKWLALDLEQ
CVPFWPEDASNKLLIRVERSESPPHKIHFNKEESCILLRLDNELGGIIAEVNLAEHSTVI
TFSDYRDGAATFLLINHTKNDIVQYKQSSLSEIEDSLPPGKAVFYTWADPVGSRKLQWKC
GKSHGEVTQKDDMMTPINLGKTTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAEQ
EIVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPRKKARWKPMSVKHTEKLEKEFK
EYSESSPSEDKVIELDTNILVRFTPGASNMKILQPHVIAIRRNYLPALKVEYSTSAHQSS
FRIQIYRIQIQNQIHGAIFPFVFYPIKPPKSVTLDSAPKPFTDVSIVMRSAGHSQISRIK
YFKVLIQEMDLRLDLGFVYAVSELMTPAEVTEKTEVELFHKDIEAFQEEYKIVSLVDSSQ
VSLYEYFHISPIKLHLSVSLSSGGEEPKDSEQHEGLMAIRSLQLLLKSIGATLTDVQDVV
FKLAFFELNYQFHTTAELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEA
FFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQ
QKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGATGFFKGVGKGL
VGAVTRPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQM
LQVMENGRFAKYKYFTHVMINKTDMLMITRSGVLFVTKGTFGQLTCEWQYSFDEFTKEPF
IVHERRLRIEAKERVKSVFHAKEFGKIVNLRTPEDARWILRKLEEAREPSPNL
NT seq
9522 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcagtctgggcatctgggcaggagctgtggccctgaagaat
cttgaaattaaagaaaatgccctgagtcaactggatgtaccatttaaaattaaagttggc
catataggtactcttaatcttataattccatggaaaaacctttatacccaaccagttgaa
gctgtattggaaggcgtttatttactcatagtgccttcttctagaataaaatatgatcct
ataaaagaagaaaaacaactctttgaagcaaagcaacaggaattgaaaagaatagaagaa
gcaaaacgaaaagtagctgatcaagaaaaacagcatgtggagaaacaggacactttcaca
gaaaaattaattacccagattataaaaaatcttcaagtgaaaatttccaacatccatatt
cgctatgaagatgatgtcacaaatcgagaaaaccctctgtcatttggtatttcccttcag
aatctcagcatgcagacaactgatcaatactggattccatgtttacatgatgaaactgag
aaattgtttcgtaagttaatccgattggataacctttttgcctattggaatgtgaagact
cagctgttttatcttagtaattatgatgaatcattgagcagcctgaggaatggcattgtt
gatgaaaatattgttccagaaggttataattttgtatttcgccccatatctgctaatgcc
aaacttcagatgaatcgcagatcggattttgacttttctgcccccaaaatagacctggat
gttgagttacatgacataacaattgaacttaataaaccacagtatttcagttttatggaa
cttcttgaatcggttgatatgatgacgcaaaatctaccataccggaaattcaaacctgat
gtacctcttcataaccatgccaaagaatggtgggcttatgctatacgtggtattcttgaa
gtaaacattcgcccccacttacggatgtggtcctggaagcatattagagaacataggcaa
aaaatgaagcaatataaagaactgtataaaaaaaagctaacaagtaagaagccatctggt
gaacttctcaactctttggaggagttggaaaagactttggatgtatttaatataactata
gcaagacaacaggcggaagttgaggtaaagaaagctggatacaggattttcagagaagga
gcagaagagtcagagggcaataaaggatggtttagctggatgtggaactggtcagaatcg
catagtaaacaacaactagatattaaacctggaagtcttgaagaaatattgacacctaaa
gaaaaaagtttgctgtatgaagcaattggctatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagcaatgaagctttttgttcacttgaaaagtatgtctattattcta
agagaacaacaacaaaaacctgaactgctagatattgtagtggaagaatttagtactttg
attgtgcaaagaccaggagcacaagcagttaaatttgaaaccaaaatagattcatttcat
gttactggcttaccagataactcaacaaaaccccgcctcctgtcttcattagatgatgct
gcatcactcttgaaaattatgtttgagataaatcctttagatgaaactgttgctcagagg
tgtatcatagaagctgaacctttagaaatgttatatgatgcaagaacagtgaatagtata
gtagaattcttcagacctccaaaagaggtaaatctagcacagctgacttcagtaactttg
acaaaacttgaagaatttcgtgataagacagcaacaggtctggtatatattattgaaaca
cagaaagttcttgatctcaaaattaacttgaatgcttcatatatcattatcccacaagat
ggtatctttagccctacgtcaaatctccttcttttggatcttggacatctaaaggtgaca
agtaaaattcgttcagaattaccagatttaaaacaaggtggagccaatcgtgaagagata
atgcatagagcttatgattcctttgatattcagcttacaagcatacagctgcttttcagc
agagttggtgataattggaaagaagcacgaaaactcaatgtgtctgcacagcatatcttg
gtacctatgcacttcaatgtggaactctctaaggccatggttttcatggatataagtatg
cccaaattcaagatttatggaaacttaccattaatttctttacgaatctcagataaaaaa
ctgcaagggattttggaactgattgaaagcattccaaaaccctcacctgcaactgaagta
aatgagcctgtcaaatcatctcaggttcaaagatccacttctttgggaacatcacagatg
tcacagaagaaatttcctcttttggaaattccatgtgttgaagatgattcagatgaggag
ttttttgatgcaccatgtagtccgttggaagagcctcttcaatctccatctagaattaaa
agtcctcaacagaaaaatcttcagaaaccagattgttttaaaaatatgattgagtataaa
ataagatttgaagtgccagaggttttgattcagttctgtcaccttgttggagactgtgaa
ctacctgtggtagaaattaatgtcttaggattgggcacagatattgagcttagaacattt
gatttgaaagcaaatgcctttttgaaagaggtctgcttaaaatgtccagattattttgat
gaaaacaagaaaccagtttatttgattacaacactggataacacaatggaagatctctta
acactggaatatgtgaaggctgaaaataatttacctgcaacaatattgaagaatgcttat
aacaatgttgtgcaactgataaaggtgaatttttcctctttggatattcatttacatact
gaagcacttctgagtacaataaattattttaataatatccttccatatttggaggaaaaa
ccagccccggtgcatgttgtggagactgaagacaaagaggaggttgttaaaaaaataact
ttaaaatcatccaagaatgaagatactattaccttgcagattttagcagaattatcatgt
ttacagatctttattcaagatcagaaacgtaacatttccgaaattaagatagaagggctt
gattgtgaaatcattatgaggccatcagtgactgaaacaaatgcaaagctaaggaatata
attgtcctggattctgacataacagctgtatacaaaaaggctgtttatattaccggaaaa
gaagttttcagcttcaaaatggtttcttatatgggtgcaactgctggttctgcatacaca
gatatgaatgtagttgatatgcaagttaatttaactgttggttgcattgaagtagttctt
gtcaaaaaatttctgtattctatattggcttttatagataattttcaagcaggtaaacaa
gccttagcggaggcaactgttcaggcagcaggaatggctgctactggtgtaaaagaactg
gcacagaggagttctagaatggcattggatgttcacatcaaagcccctgttgtggttatc
ccacagtctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgaaa
aatacattccatgtaataacaaagagtccgaccaaccccccacccattattgatttgata
acgataaagctaagtgaaatgcgactatacaggactcaatatattaatgatgcataccag
gaagtactggatctactattgccattaaatcttgaggtgatggttgagcgaaatttatcg
tgggagtggttccaagaagttccttgtttcaatctaaatgctcagctaaagcccatggag
ttcattcttagtcaagaagatataacgaccatttttaaaacattatatggcaacatatgg
tatgaaggtgatagtgcttcacatgaagtagcaaaggatcagtccagcgttactagtggt
gctactactgcgtcacaccacgcggcaggcacagctgtagtgacagctgctgtggtggaa
gtacattcacatgctgctcaagtgaagacagcactgaatatgagtttcacaaccgggtat
ctcaccatggtgctgtatagtccaggtcctaaacagacttcctttacagatattcgtgat
ccttctctgaaacttgctgaatttaagttggagaatattataagcactttaaaaatgtat
acagatgactcaatattttcttccttctcattaaaaaactgtattttagatgacaaaagg
cctcatatcaagaaggcaactcctagaatgataggactgacagttgggtttgacaaaaag
gacatgatggatgtaaggtataggacgatccgagatggttgggtggctgatatagtcctt
caagaaatgtatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttctt
gaggcctacactacaggcactgccgtagaaaccagtgttcaaacgtggcctgctaaagaa
gaagtacctaaacagcaatcagaaaagtgggaaatgaacatcactattaaaaatcctgaa
attgtgtttgtcgctgatatgacaagaaatgatgctcctgccttagtcattacaacacag
tgtgaaatatattggctaggtgactttgaaaatgatacaatgactgctgccattaaagat
ctccaagtgagagcatgcccatttcttccagtcaagagaaaaggaaaaatcactactgtt
ttgcaaccttgtgacttgttctatcaagctactcagataagtacagatccacaagtactt
gaattatcagtaaaatccctgacactgaaggtttcaccagttatcataaatactgtgatt
accataacttcagcactttatactgctaaggaaaccatcccaaaagaaactgcttcttct
acagcacatttatgggaaaagaaggatacaaaagatttaaatatgtggtttcttgaagaa
ccaaatgaagctgtaaaaagagctcccatgcctgaattggtacccaaaggagagataata
aaaatgaacattgattctatttttctggttcttgaggctggaattggtcatagaacagta
cctatgctattggcaaaatcacgtttctcaggggaaggcaaaaactggagttccttaata
aatctccactgtcagcttgagctagaagtacattattacaatgaaatgtttggtgtgtgg
gagcctttgcttgaacccttagaaattgatcaaactgaggattttagaccatggaatctt
ggaatcaagatgaaaaagaaagccaaaaaggccattgttgagtcaggtactgaagaagaa
aattacagagtaccagaatacaaaactgtcatcactttctattcgaaagaccagctaaac
attacattatctaaatgtggccttataatgttaaataatttagctgaggcatttacagaa
gctgccactggatcttcagctaccttcataagggatctggcaccttttatgattttaaat
tctcttggacttagtatttctgtttcaccaagtgaatcttttagtgtactcaacattcct
atggcaaaatcatatgtattgaaaaatgaggagagtttaagtatggattatatgcgaact
aaagacaatgatcatttcaatgcaatgaccagcctaagcagcaaacacttcttcattctt
cttacacctgctaaccactctactgctgataaaatccctttaacaaaagtgggacgacga
ctgtacactgtaagacacagggagtctggagttgaaagatcaattgtttgtcagattgat
gcagtggaaggaagtaagaaggtaacaattcgctctccagtgcagattagaaatcatttt
tcaataccattttctgtttatggaggagacacgttattgggaacggcctcgcctggaagt
gaatttaacataccattagcatcttaccgatcactactttctctgaagccagaagatgca
gactatcagatgtgtgaaggaattgaccttgaagaaattataaaacaagatggtacttct
ttcaagaaaaaatgtagacctatacacccttccaggaagccatttatcattaatatagtc
ccagaaaaagataatttgacatatatgtcagtgtattcagaagaccgttgggacttacca
tacataatacatttgtggccacctattctactccgaaatcttcttccttacaaaattgct
tattacatagaggggattgaacatagagtttttactctccatgaaggccgttcagcccag
ctttgtactgtacagttggataaagccaggctacatttaaaattacttgactatcttaat
catgattggaaaagtgaatatcatataaaacctaatcaacaagatattagtttcatcagt
tttacttgtgttacagaaatagaaaagactgatttagatattgctgtccatgtgacttat
aatactggccagactattatggcatttcatagtccttattggatggttaataaaactggt
cgaatgttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaaag
ccagttctcttttcatttcagccaaagcactttttcaataacaataaggttcagcttatg
gtaactgatagtgaattgtcagatcaattttcaattgatacagttggtagtcatggagcg
gttaaatgtaaaggcccaaaaatggaatatcaagttggtgtcactatagaccttagcagt
tttaacattaccagaattgtcacatttacccccttttttttgattaaaaacaaaagcaaa
tatcatatatcagtggctgaagagggaaatgataaatggctcgctcttgatttggagcag
tgtgtccccttttggcctgaggatgcttctaataaacttcttattcgagttgaaagaagt
gaaagccctccccataagatacattttaataaggaagaaagttgtattttactgcgtcta
gacaatgagcttggaggtattatagcagaagttaatttggctgagcattctacagttatt
acattttcagattatcgtgatggagctgctacatttctgttaataaatcacaccaagaat
gacattgttcagtataagcaaagttccctcagtgaaatagaagattccctccctcctgga
aaagcagtattttatacatgggctgatccagtgggctctagaaagctgcagtggaaatgt
ggaaaaagccacggtgaagtaacacaaaaggatgatatgatgacacctataaatttgggg
aaaacgaccatttatttagtttcattttttgaaggcttacaacgcataattttattcact
gaagatccaagagtatttaaagtgacatatgaaagtgagaaagcagagttagcagagcaa
gaaattgtgttggcgttacaagatgttgggatttctcttgtcaacaattatacaaagcaa
gaagtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaggaag
aaggcaagatggaagccaatgagtgtaaagcacactgagaagttagagaaggaatttaag
gaatattctgaatcttcaccatcagaagataaggttattgagttggacaccaacattctg
gttcgcttcacacctggtgcttctaacatgaaaattctgcagccacatgtaatagctata
agaagaaattatcttccagcattaaaagtagaatatagcacatctgcacatcagtcatcg
tttagaattcaaatttatagaatacagatccaaaaccaaatacatggtgctatatttcca
tttgtgttttatcccattaaaccacccaagtccgtcaccttggattcagcaccaaaaccc
tttactgatgtcagtattgtcatgagatctgcaggacattcacagatatcacgtattaag
tatttcaaagtgttgatccaagaaatggatctcaggttagatcttggatttgtctatgct
gtatcagaacttatgacaccagctgaagtcactgaaaaaacagaggttgagctttttcat
aaagacatagaagctttccaagaagaatataaaatagtctcattagtagattcatcacaa
gtcagtctctatgaatactttcatatatctcctatcaagttgcatttaagtgtttcactg
agttcaggcggtgaagaaccgaaagattcagaacagcatgaaggactgatggcaattcgt
tctttacaacttttgctgaagagtattggtgccactctcacagatgtacaagatgtagtt
tttaagctagcattttttgaactcaattatcagttccatacaacagctgaactacagtct
gaagtaataagacactattcaaagcaggccattaaacagatgtatgtactcattcttgga
cttgatgttttgggaaatccctttggcttgataagagaattttctgaaggtgtagaagca
tttttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggaaggaatg
gcactaggactgaaagcactagttggtggagctgttggtggactagctggtgctgcctcc
aaaatcaccagtgctatggctaaaggggtggcagctatgactatggatgaagactaccaa
cagaagagaagagaagccatgaataagcaaccagctggtcttagggaaggcatcactcga
ggaggaaaaggcctagtttctggttttgtaagtggcataacaggaattgttacaaaacca
atcaaaggagctcagaaagaaggagcaactggtttctttaaaggtgttgggaaaggttta
gttggagcagtgacaaggccaactggaggcatcatagacatggctagcagtacatttcag
ggaataaaaagagctacagagacctctgatgaagtggagagtctgcgaccccctagattc
tttaatgaagatggagttatcagaccttacaggttgagggatggtactggaaatcaaatg
ttacaggtcatggaaaatggaagatttgcaaaatacaagtattttacccatgtcatgatc
aataagacagacatgttaatgattaccagaagtggtgtgttgtttgtaacaaaaggaaca
tttggacagcttacttgtgagtggcagtatagttttgatgagtttaccaaagagccattc
attgttcatgagagaagactgcgcatcgaagcaaaggaacgggtgaagtctgtattccat
gccaaagagtttggaaaaatagttaacttgagaaccccagaggatgcaaggtggatcctc
agaaagctagaagaagcaagagaaccttccccgaacctctga
DBGET
integrated database retrieval system
