Bubalus kerabau (carabao): 129652366
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Entry
129652366 CDS
T11435
Symbol
SF1
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129652366 (SF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bke03041
]
129652366 (SF1)
Spliceosome [BR:
bke03041
]
Complex A
Other components
Complex A specific factors
129652366 (SF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
SLU7_N
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
CHP02642
Motif
Other DBs
NCBI-GeneID:
129652366
NCBI-ProteinID:
XP_055436860
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All DBs
Position
5:8066367..8080264
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AA seq
763 aa
AA seq
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MATGANATPLGKLGPPGLPPLPGPKGGFEPGPPTAPGPGAGLLVSGPLPPPPVGSAGALT
AAFPFAALPPPPPPPPPPPPQQPPPPPPPSSGSSYSPPQPPPPPPLYQRVSPPQPPPPQP
PRQDQQPGPAGGGGDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQL
QIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEM
VALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIM
IRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQ
NDLRKMQLRELARLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQR
PGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPATTPLASAPRPAAPANNPPPP
SLMSTTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHN
PNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMG
MMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSA
GTGSIPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMM
YAPPPPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagcgaacgctacgccgctgggtaagctgggccccccaggcctccctccc
ctccctggccccaaagggggcttcgagccgggaccaccgactgcccccgggcctggggca
gggctgctggtgtccgggccgctgccgcccccgcccgtgggctcggcgggggccctgacc
gcggccttcccctttgcggcgctaccgccgccgccgccgccgccgccccccccgcctccc
cagcagccgccgccgccaccgcccccctcctcgggctcctcgtactcgccgccgcagccg
ccccctccgccgccgctctaccagcgcgtgtcgccaccacagccaccgccaccccagccg
ccgcgtcaggaccagcagccgggcccggccggcggcggaggagacttccccagtaagaag
cggaagaggagccgctggaaccaagacacaatggaacagaagacggtgattccaggaatg
cctacagtcatcccccctggacttactcgggaacaagaaagagcttatatagtgcaactg
cagatagaagacctgactcgtaaactgcgcacaggagacctgggcatcccccctaaccct
gaggacaggtccccttcccctgagcccatctacaatagtgaggggaagaggcttaacact
cgcgagttccgcacccgcaagaaactggaggaggaacggcataatcttatcacggaaatg
gttgccctcaaccctgatttcaagcctcctgcagattacaaacctccagcaacacgtgtg
agtgataaagtaatgatcccacaagatgagtatccggaaatcaattttgtggggctgctg
attgggccaagagggaacaccttgaagaacatagagaaggagtgtaatgccaagatcatg
atccgggggaaaggttctgtgaaagaaggaaaagttgggcgcaaagatggccagatgctg
ccaggagaagatgagccgcttcatgccctggtcactgccaataccatggagaatgtgaag
aaagcagtagaacagataagaaacattctgaagcagggtatcgagacccctgaggaccag
aacgacctacggaagatgcaacttcgagagttggctcgcttgaatgggacccttcgggaa
gatgataacaggatcttaagaccctggcagagctctgagacccgcagcattaccaatacc
acagtgtgtaccaagtgtggcggggctggccacattgcttccgattgcaagttccaaagg
cctggtgacccccagtcagctcaggataaagcgcggatggataaagaatacttgtccctc
atggctgaactgggggaggcacctgtgcctgcatctgtgggctccacctctgggcctgcc
accacaccactggccagtgcaccgcggcctgctgctcccgccaacaacccacctccaccg
tctctcatgtccactacccagagccgcccaccctggatgaactccggcccgtcagagagt
cggccctaccatggcatgcatggaggtggccctggtgggcccggaggtggcccccacagc
ttcccacacccgctgcccagcctcacaggtgggcatggtggacatcccatgcagcacaac
cctaatggacctccgcccccctggatgcagccgccaccaccaccgatgaaccagggcccc
cacccacctgggcaccatggccctcctccaatggatcagtacctgggaagtacgcctgtg
ggctctggggtctatcgcctgcatcaaggaaaaggtatgatgccgccgccacctatgggc
atgatgccaccgccgccgccgcctcccagtgggcagcctccgccccctccctctggtcct
cttcccccatggcaacagcagcagcagcagcctccgccaccccctccgcccagcagcagt
atggcttccagtacccccttgccatggcagcaaaatacgacgactaccaccacgagcgct
ggcacagggtccatcccgccatggcaacagcagcaggcggctgccgcagcttctccagga
gcccctcagatgcaaggcaaccccactatggtgcccctgcccccaggggtccagccgcct
ctgccgcccggggcccctccccctccgccgcctccgccgcctggttccgccggcatgatg
tatgccccgccccctcctcctccgcctcccatggacccttctaactttgtcaccatgatg
ggcatgggggtggcgggcatgccaccctttgggatgcctccagctcccccaccgcctcca
ccacagaactag
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