Bubalus kerabau (carabao): 129652760
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Entry
129652760 CDS
T11435
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bke03000
]
129652760 (SOX13)
Transcription factors [BR:
bke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
129652760 (SOX13)
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Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
129652760
NCBI-ProteinID:
XP_055437682
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All DBs
Position
5:55824244..55841828
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AA seq
659 aa
AA seq
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MEGTNGEPGPVPAVKTDACGNEGPFSGLLAGSGRMSMRSPGSAQLVLDEVGTMVNCTVKA
EGKKEPCYEDPQGSAAAAESQPGDPARTPQNGADPQAPAQGDRDIQCVLQDSSSLENSES
PEPRRPGGSEAASGSQEKLDFNRNLKEVVPAIEKLLSSDWKEKFLGRSSVETKDVKGTKE
SLAEKELQLLVMIHQLSALRDQLLTAHSEQKNMAAMLLEKQQQQMELARQQQEQIAKQQQ
QLIQQQHKINLLQQQIQQVNMPYVMIPAFPPSHQPLPVTPDSQLALPIQPIPCKPVEYPL
QLLHSPPAPVVKRPGALPAHHPLQEPSQPLNLTAKPKASELPNSSSSPNLKLSNCGPRPP
SHGAPTLDLQANPPSLPLGFLGEGDAVTKAIQDARQLLHGHSGALDTSPSAPFRKDLISV
DTSPAKERLEDSCVHPLEEAMLGCDMDGSRHFPESRNSSHIKRPMNAFMVWAKDERRKIL
QAFPDMHNSSISKILGSRWKSMSNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIV
EGKRLRVGEYKALMRTRRQDARQSYATPQQTSQVQMSPSEVLYPRVAGVPLAQPLVEHCV
PRSLDPNMPVIVNTCSLREEGEGTEDRHSAADGEMYRYSEDEDSEGEEKSDGELVVLTD
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaccaatggagagccagggccagtgcctgcagtgaagacagacgcctgtggg
aatgaagggcccttttctgggctgctagcaggatctggcaggatgtctatgaggagcccc
ggctctgcccagctggtcctggatgaagttggcaccatggtgaactgtactgtcaaggca
gaggggaagaaggagccctgttacgaggacccccaaggctcagccgctgcggctgaatcg
cagcctggagacccagcccgcaccccccagaatggtgctgacccgcaagctccagcccag
ggtgacagggacattcagtgtgtcttgcaggacagcagctccctggagaacagtgagtcc
ccagaacccaggagaccaggaggttccgaggctgcttctggaagccaggagaagctggac
ttcaacagaaatttaaaagaagttgtgccggccatcgagaagttgctgtccagtgactgg
aaggagaagttcctgggaaggagctctgtggaaaccaaagatgtcaaagggaccaaggag
agcctggcggagaaggagctgcagcttctggtcatgatccaccagctgtccgcccttcgg
gaccagctcctgacagcgcactcggagcagaagaacatggccgcgatgctcctggagaag
caacagcagcagatggagctggcccggcagcagcaggagcagatcgctaagcagcaacaa
cagctgattcagcagcagcacaaaatcaacctccttcagcagcagatccagcaggtcaac
atgccttacgtcatgattccagccttccccccaagccaccaacctctgcccgttaccccc
gactcccagctggctctgcctattcagcccatcccctgcaagccagtggagtatccgctg
cagctgctgcacagcccccctgccccagtggtgaagaggcccggggccttgccagcccac
caccccctgcaggaaccctcccaaccgctgaacctcacggccaagcccaaggcttcggag
ctgcctaattcctccagttcccctaacctgaagctgagcaactgcggaccgcgtccccca
agccatggggcccccacgctggacctgcaggccaacccccctagcctgcctttgggcttc
ctcggtgaaggggacgctgtcaccaaagccatccaggatgcccgacagctgctgcacggc
cacagcggagccttagacacttcccccagtgcccccttccgtaaggacctcattagcgtg
gacacatctccagccaaggagcggctggaggacagctgtgtgcacccactggaagaagcc
atgctgggctgtgacatggacggctcccgccacttccctgagtcccggaacagcagtcac
atcaagcggcccatgaacgccttcatggtgtgggccaaggacgagagaaggaagatcctc
caagccttcccagacatgcacaactccagcatcagcaagattctcggctcccgctggaag
tccatgagcaaccaggagaaacagccttactacgaggagcaggccagactgagcaggcag
cacctggagaagtaccccgactacaagtacaagccgcggcccaagcgcacctgcatcgtg
gagggcaagcggctgcgggtgggcgagtacaaggctctgatgaggacgcggcgccaggat
gcccgccagagctacgcgaccccccagcagaccagccaggtgcagatgagcccctcagaa
gtcctgtacccgcgggtggcaggcgtgcccctggcacagcccctggtggagcactgtgtg
ccccgcagcctggacccgaacatgccggtcatcgtcaacacctgcagcctcagggaggag
ggcgagggcacagaggacaggcactcagcggctgacggcgagatgtaccggtacagcgag
gatgaggactcggagggcgaggagaagagcgacggagagctggtggtgctcacggactga
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