Bubalus kerabau (carabao): 129652771
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Entry
129652771 CDS
T11435
Symbol
NFASC
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04514
Cell adhesion molecule (CAM) interaction
bke04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
129652771 (NFASC)
04517 IgSF CAM signaling
129652771 (NFASC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bke04515
]
129652771 (NFASC)
Cell adhesion molecules [BR:
bke04515
]
Immunoglobulin superfamily
L1 family
129652771 (NFASC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
Ig_VEGFR-1-like_5th
V-set
FN3_DSCAM-DSCAML_C
Ig_5
V-set_CD47
Ig_PDGFR_d4
VEGFR1-3_N_Ig-like
Fn3_PBP1
BiPBP_C
Fn3_Dep-1_3rd
DUF4998
Motif
Other DBs
NCBI-GeneID:
129652771
NCBI-ProteinID:
XP_055437702
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All DBs
Position
5:56529987..56726084
Genome browser
AA seq
1468 aa
AA seq
DB search
MRRREASGAAGDDGQAAARAADSADCTRGRSPSPCRLTDFCAVWDAGVLLVSAAGKGAPS
GVTGRRLNESETLNSVREAQFQRLEAARPRGPGRGAQGLVLRMAGQPPPWAYTAVLLCAL
SLSGAIEIPMDLSQPPTITKQSVKDHIVDPRDNILIECEAKGNPAPSFHWTRNSKFFNIA
KDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFARNKFGTALSNRIRLQVSKSPLWPKE
NLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPISQDKRVSQGHNGDLYFSNVMLQ
DMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLL
LECIASGVPTPDIAWYKKGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSI
RHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSAPPNPN
REVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLDVPPRMLSPRNQLIRVILY
NRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHVYENGSLEIKMIRKEDQGIYTCVATN
ILGKAENQVRLEVKDPTRIYRMPEDQVAKRGTTVQLECRVKHDPSLKLTVSWLKDDEPLY
ISNRMKKEEDSLTIFGVAERDQGSYTCVASTELDQDLAKAYLTVLADQATPTNRLAALPK
GRPDRPRDLELTDLAERSVRLTWIPGDDNNSPITDYVVQFEEDQFQPGVWHDHSKFPGSV
NSAVLRLSPYVNYQFRVIAINEVGSSHPSLPSERYRTSGAPPESNPSDVKGEGTRKNNME
ITWTPMNATSAFGPNLRYIVKWRRRETRETWNNVTVWGSRYVVGQTPVYVPYEIRVQAEN
DFGKGPEPDTIIGYSGEDYPRAAPTDVKIRVLNSTAISLQWNRVYSDTVQGQLREYRAYY
WRESSLLKNLWVSQKRQQAGFPGDRLRGVVSRLFPYSNYKLEMVVVNGRGDGPRSETKEF
TTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNGILIGYTLKYVAFNGTKVGKQIVENF
SPNQTKFTVQRADPVSRYRFSLSARTQVGSGEAVTEESPAPPNEATPTAAPPTSPPTTVG
APGTASSTDATAAAAATEATTVPTVPPTTTATTEATTVPTVPPTTTATTEATTVPTVPPV
APTTTATTEATASTATTTTTESPATTSRTEIQESAPDEQSIWNVTVLPNSKWANISWKHN
FGPGTDFVVEYTDSNHTKKTVPVKAQAQPVQLTDLYPGMTYTLRVYSRDNEAISSAAVTF
MTSAAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPE
DPKEEDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQY
TVKKDKEETEGNESSEATSPVNAIYSLA
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggcgggaggcgagcggcgctgcgggggacgacgggcaagcggcggcgcgggcg
gcggacagcgccgactgcacccggggccggagccccagcccttgcaggttgactgacttc
tgtgcagtttgggacgctggagttctccttgtctctgcagccgggaagggagccccctct
ggcgttacaggaaggaggctgaatgagtcagagacgctgaactccgtccgggaggctcag
ttccaacgactggaggcagcgagacctcgcgggccggggcgcggggcacaaggcctggtg
ctcaggatggccgggcagccgccgccctgggcctacacagccgtcctcctctgcgcgctc
agcctcagcggggccatcgagatccccatggacctgtcccagcccccgaccatcaccaag
cagtccgtgaaggaccacattgtagatccccgtgacaacatcttgattgagtgtgaagcc
aaggggaaccctgcccccagcttccactggacgcgcaatagcaagttctttaacatcgcc
aaggacccccgggtgtcgatgaggaggcggtctgggacgctggtgatcgacttccgcagt
ggcgggcggccagaggagtacgagggggagtaccagtgctttgcccgcaacaaatttggc
acggccctgtccaatcggattcgcctgcaggtgtccaaatcccccctgtggcccaaggaa
aacctcgaccctgtcgtggttcaagaaggtgcccccttgacgctccagtgcaacccccca
cctgggcttccatccccggtcatcttctggatgagcagctccatggagcccatcagccaa
gacaagcgtgtctcgcagggccataacggggacctgtatttctctaatgtgatgctgcag
gacatgcagacagactacagctgcaatgcccgcttccacttcacccacaccatccagcag
aagaacccattcaccctcaaagtcctgaccacccgaggagttgcagagagaacacccagc
ttcatgtatccccagggcactgcgagcagtcagatggtgctgcgtggcatggacctccta
ctggagtgcatcgcttccggggtccccacaccagacattgcatggtacaagaaaggtggg
gacctgccatccgacaaggccaagtttgagaacttcaacaaggccctgcgcatcaccaat
gtgtccgaggaagactctggggagtatttctgcctggcctccaacaagatgggcagtatc
cggcacacgatctcggtgagagtgaaggctgctccctactggctggatgaacccaagaac
ctcatcctggctcctggcgaggatgggagactggtgtgtcgagccaatgggaaccccaag
cccacggtccagtggatggtgaacggggaacctttgcaatcggcaccgcccaaccccaac
cgtgaggtggccggggacaccatcatcttccgtgacacgcagatcagcagccgggccgtg
taccagtgcaacacctccaacgagcacggctacctgctggccaacgccttcgtcagcgtg
ctggacgtgccgcctcggatgctgtcgccccggaaccagctcatcagggtgatcctgtac
aaccggacccggctggactgcccgttctttgggtctcccatccccacgctccgatggttt
aagaatggacaaggaagcaacctggatggtggcaactaccacgtctatgagaacggcagt
ctggagatcaagatgatccggaaagaggaccagggcatctacacctgtgttgccaccaac
atcctgggcaaagcagagaaccaggtccgcctcgaggtcaaagaccccacgaggatctac
cggatgcctgaggaccaggtcgccaagaggggcaccacggtgcagctggagtgccgcgtg
aagcacgacccctccctgaagctcacggtctcctggctgaaggacgacgagccgctctac
atcagcaacagaatgaagaaggaggaggattccctgaccatcttcggcgtggccgagcgg
gaccagggcagctacacgtgcgttgccagcactgagctggaccaagacctggccaaagcc
tacctgaccgtactagctgatcaggccactccaactaaccgtttggctgcccttcccaaa
ggacgaccggaccgaccccgggacctggagctcaccgacctggctgagagaagcgtgagg
ctgacctggatcccaggggacgacaacaacagccccatcacagactacgtcgtccagttt
gaagaagaccagttccagccaggggtctggcacgaccattccaagttcccgggcagtgtc
aactcagctgtgctccggctgtcaccctacgtcaactaccagttccgggtcatcgccatc
aatgaggtgggcagcagccaccccagcctcccatctgagcgctaccgaaccagcggagca
ccccccgagtccaacccctctgatgtgaagggagaggggaccaggaagaacaacatggag
atcacgtggacgcccatgaatgccacctccgccttcggccccaacctgcgctacatcgtc
aagtggcggcggagagagacccgcgagacctggaacaacgtcaccgtgtggggctcccgc
tacgtggtagggcagacccccgtctatgtgccctacgagatccgagtccaggctgaaaat
gactttgggaagggccctgagccggacaccatcatcggttactctggagaagattatccc
agggctgcacccacagatgttaaaatccgagtcctgaacagcaccgccatcagccttcag
tggaaccgcgtctactccgacacggtccagggccagctcagagaatatcgagcctactac
tggagggagagcagcttgctgaagaacctgtgggtgtctcagaagaggcagcaagctggc
ttccccggcgaccgcctgcgtggtgtggtgtcccgcctcttcccctacagtaactacaag
ctggagatggttgtggtcaatgggcgaggcgatgggcctcgcagtgaaaccaaggagttc
accaccccggaaggagtacccagtgcccccaggcgtttccgagtccggcagcccaacctg
gagacaatcaacctggaatgggatcatccagaacaccccaatgggatcctgattggatat
actctcaaatacgtggcctttaatggaaccaaagtaggaaagcagatagtggaaaacttc
tctcccaatcagaccaagttcacggtgcaaagagcagaccccgtgtcgcgctaccgcttt
tccctcagtgccaggacgcaggtgggctcaggggaagcagtcacggaggagtcgccagca
cccccgaatgaagccacgccaaccgcagcgcctcccacgtcgcccccgaccacggtgggt
gcgcccggcacggcgagcagtaccgatgccactgccgccgccgccgccaccgaagccaca
acagtccccaccgtcccacctaccaccaccgccaccaccgaagccacaacagtccccacc
gtcccacctaccaccaccgccaccaccgaagccacaacagtccccaccgtcccacctgtc
gcacctaccaccaccgccaccaccgaagccacagcctccaccgccaccaccaccaccacg
gagagtcccgccaccacctccaggactgagatccaagaatccgcccccgacgagcagtcc
atctggaacgtcactgtgctccccaacagtaaatgggccaacatcagctggaagcacaat
ttcgggcccggaactgactttgtggttgagtacaccgacagcaatcatacgaaaaaaact
gtccctgttaaggcgcaggcccagcccgtacagctgacagacctctatcccgggatgaca
tacacgttgcgcgtttattcccgggacaacgaggccatcagcagcgccgccgtcaccttt
atgaccagtgcagcctacaccaacaaccaggcggacattgccacccagggctggttcatc
gggctcatgtgcgccatcgccctgctggtgctgatcctgctcatcgtctgtttcatcaag
aggagtcgcggcggcaagtaccccgtgcgagaaaagaaggatgtgccccttggccctgaa
gaccccaaagaagaggatggctcctttgattacagtgacgaggacaacaagcccctgcag
ggcagccagacgtccctggacggcaccatcaagcagcaggagagcgacgacagcctggtg
gactatggcgagggcggcgagggccagttcaacgaggacggctccttcatcggccagtac
acggtcaagaaggacaaggaggagacggagggcaacgagagctcggaggccacgtcgcca
gtcaacgccatctattctctggcctag
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