Bubalus kerabau (carabao): 129652825
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Entry
129652825 CDS
T11435
Symbol
RPAP3
Name
(RefSeq) RNA polymerase II-associated protein 3 isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bke03021
]
129652825 (RPAP3)
Transcription machinery [BR:
bke03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
129652825 (RPAP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_BSK1_C
TPR_16
TPR_19
TPR_12
TPR_14
TPR_9
TPR_7
ARM_TT21_4th
ANAPC3
Fis1_TPR_C
MIT
ARM_TT21_C
DUF7109
Motif
Other DBs
NCBI-GeneID:
129652825
NCBI-ProteinID:
XP_055437817
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All DBs
Position
1:complement(89883463..89919803)
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AA seq
713 aa
AA seq
DB search
MLCPGSRGRGESARGLVGKSRKAGPGVSCCRLDAVEEGDWLVKTLQSIMASTSKAIELQL
QVKQNAEELQDFMRDLENWEKDIKQKDMELRRQNGVPEENLPPIRNGNFRKKKKGKVKES
SKKTKDENTKNRIKSYDYEAWAKLDVDSILDELDKEESTHDSVSQESESEEDGIHVDSQK
ALALKEKGNKYFKQGKYDEAIECYTKGMDADPYNPVLPTNRASAYFRLKKFAVAESDCNL
AIALNRSYTKAYARRGAARFALQKLEDAKKDYEKVLELEPNNFEATNELRKINQALTSKE
DSYPGETDTMVKSDEGEKKQIEEQQNKQQAISEKDRGNAFFKEGKYERAIECYTRGIAAD
GANALLPANRAMAYLKIQKYEEAEKDCTQAVLLDGSYSKAFARRGTARTFLGKLSEAKQD
FETVLLLEPGNKQAVTELSKIKKELIEKGHWDDVFLDSTQRQNVIKPIDNPPHLGSTKPL
KKVIIEETGNLIQTVDVSDSTATVATPECNPVTLASVTATTGTTSKNSSQDDLLPTSGVP
KAKVLKIEEISDTSALHSHVNLKKDVCQSFSEKIPTEVDKAPAQFIRTVLPPVPANSFQL
ESDFRQLKSFPDMLYQYLKQIEPSLYPKLFQKNLDPDVFNQIIKILHDFYIEKEKPSLIF
EILQRLSELRRFDMAVMFMSESEKKITCVLFNHIDKSGLNDNSVEELKKRYGG
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgctctgtcccggctccagggggcggggcgagagcgcgcgaggacttgtgggaaagtct
aggaaggcagggccgggcgtgagttgctgccggctggacgcagtggaagagggagattgg
ttggtcaaaactctgcagtccataatggcttcaacaagtaaagcaattgaattacaactg
caagtgaaacaaaatgcagaagagttacaagactttatgagggatttagaaaactgggag
aaagatattaaacaaaaggatatggaacttagaagacagaatggtgttcctgaagagaat
ttacctcctattcgaaatgggaattttaggaaaaagaagaaaggcaaagttaaagagtca
tctaaaaaaaccaaagatgaaaacacaaaaaacaggataaaatcttatgattatgaggca
tgggcaaaacttgatgtggatagtattcttgatgaacttgacaaagaagagagtacccat
gattctgtgtctcaagaatccgagtcagaagaagatgggattcatgtagattcacaaaag
gctcttgctctaaaagaaaagggcaataaatacttcaaacaaggaaaatacgatgaagca
attgagtgctacaccaaaggtatggatgctgatccatataatccggtgttgccaacaaac
agagcatcagcttacttcagactgaaaaaatttgctgttgctgagtctgattgtaactta
gcaattgccttgaatagaagttatacaaaggcttatgcaagacgaggtgcggctcgattt
gctttgcaaaaattagaggatgccaaaaaagattatgaaaaagtattagaactggaacca
aataactttgaagctacaaatgaactcaggaaaattaatcaggctctaacttccaaagaa
gactcatatccaggggaaactgatacaatggttaagtcagatgaaggagagaaaaaacaa
attgaagagcaacagaataaacaacaggctatttcggaaaaagatcggggaaatgcattt
ttcaaagaggggaaatatgaaagagcaatcgaatgctatactcgagggatagcagcagat
ggcgctaatgcccttcttccagctaacagagcaatggcctatctgaagattcagaagtat
gaagaggctgaaaaagactgcacacaagctgtcttgttagatggctcgtattctaaagct
tttgccagaagaggaactgcaagaacatttttgggaaagctaagtgaggccaaacaagat
tttgaaactgttttacttttggagcctggaaataaacaggcagtaaccgaactttccaaa
attaaaaaagaattaattgagaaaggacactgggatgatgtctttcttgattctactcaa
aggcaaaatgtgataaaacccattgataatccgcctcatcttgggtcaactaagccactc
aagaaggttattattgaagaaactggtaatttgatacagactgttgatgtgtcagatagc
actgctaccgtggctactccagagtgtaatcctgttaccctggcaagtgtaacagcgacc
acaggcacgacaagtaagaactcgagccaagatgatcttttgcccacaagtggtgtccca
aaagccaaagtattgaaaatagaagaaatcagtgatacttcagctcttcactctcatgtc
aatttgaaaaaggatgtatgtcagtctttcagcgagaaaattcctacagaggtagacaaa
gcacctgctcagtttatcaggactgttcttcctccagttcctgcaaactcatttcagctt
gaatctgatttcagacaactgaaaagttttccagatatgttgtatcagtacttgaagcaa
attgaaccatccttgtatcccaagttgtttcagaaaaatctagatccagatgtattcaac
caaatcattaaaattctgcatgacttttacattgagaaagaaaagccatcactcatcttt
gaaatcttacaaagactttctgaactaagaaggtttgatatggcagtgatgtttatgtca
gaatctgagaagaaaattacatgtgtgttattcaatcacatagacaaatcaggattgaat
gataactctgttgaagaactcaagaaaagatatggtggttga
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