Bubalus kerabau (carabao): 129653133
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Entry
129653133 CDS
T11435
Symbol
PRDM16
Name
(RefSeq) histone-lysine N-methyltransferase PRDM16
KO
K22410
[histone H3]-lysine9 N-methyltransferase [EC:
2.1.1.367
]
Organism
bke
Bubalus kerabau (carabao)
Pathway
bke00310
Lysine degradation
bke01100
Metabolic pathways
bke04714
Thermogenesis
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
129653133 (PRDM16)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
129653133 (PRDM16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bke03000
]
129653133 (PRDM16)
03036 Chromosome and associated proteins [BR:
bke03036
]
129653133 (PRDM16)
Enzymes [BR:
bke01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.367 [histone H3]-lysine9 N-methyltransferase
129653133 (PRDM16)
Transcription factors [BR:
bke03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
129653133 (PRDM16)
Chromosome and associated proteins [BR:
bke03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
129653133 (PRDM16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
PRDM2_PR
zf-C2H2_jaz
zf-C2H2_6
SET
zf-C2H2_11
Zap1_zf1
zf-H2C2_5
zf-BED
zf-C2H2_15
HSV_VP16_C
C2CH-4th_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
129653133
NCBI-ProteinID:
XP_055438454
LinkDB
All DBs
Position
5:complement(104346567..104684328)
Genome browser
AA seq
1271 aa
AA seq
DB search
MRSKARARKLAKSDGDIVNNMYGPDPDLLAGESAEDETEDSIMSPIPMGPPSPFPTPKEG
SPYEAPVYIPEDIRIPPGFELRESSIPGAGLGIWAKKKMEVGERFGPYMVAPRATLNEAD
FGWEQMLTDAEVSSQESCIQKISEDLDSGKLCVDAQHAGAGSWLKYIRVACSCDDQNLTM
CQINEQIYYKVIKDIEPGEELLVHVKEGAYSLGAVPPSLDEEPTFRCDACDELFPSKLDL
RRHKKYTCSSVGAALYEGLAEELKPEGLGGGGGDGQAHECKDCERMFPTKYSLEQHMVVH
TEEREYKCDQCPKAFNWKSNLIRHQMSHDSGKRFECENCVKVFTDPSNLQRHIRSQHVGA
RAHACPDCGKTFATSSGLKQHKHIHSTVKPFICEVCHKSYTQFSNLCRHKRMHADCRTQI
KCKDCGQMFSTTSSLNKHRRFCEGKNHYPPGGIFAPGLPLTPSPLMDKAKPPPGLNHAGL
GFGEYFPSRPHPGSLPFSTAPPSFPTLTPGFPGIFPPSLYPRPPLLPPTPLLKSPLNHTQ
DAKLPSPLGNPALPLVSAVGNSSQGTTAAAGPEEKLEGHLEEAYATKLKPRGSDLSDGSD
FEDINTTTGTDLDTTTGTGSDLDSDVDSDRDKTKDKGKASEGKPEFGGSTVPPGAPNSVG
EVPVFYSQHFFPPPQEQLLTAAGAAGDSIKAIASIAEKYFGPGFMGVPEKKLGALPYHSV
FPFQFLPHLPHSLYPFTDRALTHNLLVKAEPKSPRDALKAGGPSAESPFDLTTKPKEAKP
ILPAPKVPPAPVSGEEQPLDLSIGSRARASQNGGAREPRKNHVYGERRLGPSEGLPKACP
AQLPQQPPLHYAKPSPFFMDPIYSRVEKRKVTDPVGALKEKYLRPSPLLFHPQMSAIETM
TEKLESFAAMKVDSGSSLQPLPHHPFNFRSPPPTLSDPILRKGKERYTCRYCGKIFPRSA
NLTRHLRTHTGEQPYRCKYCDRSFSISSNLQRHVRNIHNKEKPFKCHLCNRCFGQQTNLD
RHLKKHEHEHAPVSQHAGVLTNHLGTSASSPTSESDNHALLDEKEDSYFSEIRNFIANSE
MNQASTRTDKRPEVQDLDGTSQCPGLAIRKPEDVEEEEEEELEEDDDSLAGKSQDDTASP
TPEPQGAYEDDEDEEPPTSLAVGFDHTRRCVEEPPGGLLALEPMPTFGKGLDLRRTAEET
FEVKDVLNSTLDSETLKQTLYRQAKNQAYAMMLSLSEDTPLHTSSQGPLDAWLNIAGATP
ESGAFNPINHL
NT seq
3816 nt
NT seq
+upstream
nt +downstream
nt
atgcgatccaaggcgagggcgaggaagctagccaaaagtgacggcgacattgtaaataac
atgtacgggccggaccccgacctgctggcgggcgagagcgcggaggacgagactgaggac
agcatcatgtcccccatccccatggggccgccgtcccccttccccacacccaaggaaggc
tcgccatatgaggccccggtctacatccccgaggacatccgcatccccccgggctttgag
ctccgggaatcctccatccccggcgccggcctgggcatctgggccaagaagaagatggag
gtgggggagcggttcggcccgtacatggtggcgccccgggcaacgctgaacgaggcggac
ttcggatgggagcaaatgctgacggatgcggaggtgtcatcgcaggagagctgcatccaa
aagatctccgaggacctggacagtgggaagctctgcgtggatgctcagcacgccggggct
ggcagctggctcaagtacatccgcgtggcatgctcctgtgacgaccagaacctcaccatg
tgtcagatcaacgagcagatttattataaagtcattaaggacattgagccaggagaagag
ctgctggtccatgtgaaagaaggtgcctactctctgggggcggtgcctcccagcctggat
gaggagcccacgttccgctgcgacgcgtgtgacgagctcttcccgtccaagctggacctg
cggcgccacaagaagtacacgtgcagctcagtgggggccgcgctctacgagggtctggcc
gaggagctcaagcctgagggcctgggcggtggcggcggtgacgggcaggcccacgagtgc
aaggactgcgagcggatgttccccaccaagtacagcttggagcagcacatggttgtccac
acggaggagcgagagtacaagtgtgaccagtgtcccaaggccttcaactggaagtccaac
ctcatccgccaccagatgtcccacgacagcggcaagcgcttcgaatgtgaaaactgcgtg
aaggtgttcacggaccccagcaacctacagcggcacatccgctcccagcacgtgggcgcc
cgggcccacgcctgcccggactgcgggaagaccttcgccacctcctcgggcctcaagcag
cacaagcacatccacagcaccgtcaaaccttttatatgtgaggtctgccacaagtcgtac
acgcagttctccaacctgtgccgccacaagcgcatgcacgcggactgccgcacgcagatc
aagtgcaaggactgcgggcagatgttcagcactacctcgtccctcaacaagcaccgacgc
ttctgcgagggcaagaaccattacccgccgggaggcatcttcgcgcccggcctgcccctg
acccccagccccttgatggacaaggccaagccgccccctggtctcaaccacgccggcctg
ggcttcggcgagtacttcccctccaggccgcaccctgggagcctgcccttctccacggca
ccccccagcttccccacgctcacgcccggcttcccgggcatcttccctccatccctgtat
ccccggccacctctgctacctcccacgccgctgctcaagagccccctgaaccacacgcag
gacgccaagctccctagccccctggggaacccggccctgcccctcgtctccgccgtcggc
aacagtagccagggcaccacagcggctgcagggcctgaggagaagctggagggccacctg
gaggaggcgtatgccaccaaactcaagccccggggcagtgatctgtcagatggcagcgac
ttcgaggacatcaacaccacgaccgggaccgacctggacacgaccacgggcacaggctcc
gacctagacagcgacgtggatagtgaccgcgacaagaccaaggacaagggcaaggcgtcc
gagggcaagcccgagttcgggggcagcacggtgcccccgggcgccccgaacagtgtgggc
gaggttcctgtcttctactcccagcacttcttcccaccaccccaggagcagctgctgaca
gcggcgggagcggcgggcgactccatcaaggccatcgcgtccatcgctgagaagtacttc
gggcccggcttcatgggcgtgccggagaagaagctgggcgcactgccctaccactccgtg
ttccccttccagttcctgccccacctcccccactccctgtaccccttcacggaccgtgcc
ctcacccacaacctgctggtcaaggccgagccaaagtcgccccgggacgccctcaaggcc
ggcggccccagtgccgagtccccctttgacctcaccaccaaacccaaagaggccaagccc
atcctgccagcgcccaaggtgcccccagccccggtgtctggcgaggagcagccgctggat
ctgagcattggcagccgcgcgcgggccagccagaacggaggggcgcgggagccccgcaag
aaccacgtgtatggcgagcgcaggctggggcccagcgaggggctgcccaaggcgtgcccg
gcccagctgccccagcagccacccctgcactacgccaagccatcgcccttcttcatggac
cccatctacagcagggtggagaagcggaaggtgaccgacccggtgggagcccttaaggaa
aagtacctgaggccatccccgttgctcttccacccccagatgtcagccattgagaccatg
acggagaagctggagagcttcgcggccatgaaggtggactctggcagctccctgcagccc
ctcccacaccaccccttcaacttccggtccccgcccccaacgctctcagaccccattctc
aggaagggcaaggagcgatacacgtgcaggtactgtggcaagatcttcccccggtcagca
aacctcacgagacacctgaggacgcacaccggggagcagccgtacaggtgtaagtactgc
gaccgctccttcagcatctcctccaacctccagcggcacgtgcggaacatccacaacaag
gagaagcccttcaagtgccacctgtgcaaccgctgcttcgggcagcagaccaacctggac
aggcacctgaagaagcatgaacacgagcacgcgccagtgagccagcatgcgggggtcctc
accaaccacctggggaccagcgcctcctcccccacctccgagtcagacaaccacgcactt
ttagatgagaaggaagactcctatttctctgaaatcagaaactttattgccaacagtgag
atgaaccaagcatcaacacgaacagacaaacggccagaagtccaggacctagatggcacc
tcccagtgcccgggcctggccatcaggaagccagaggacgtggaggaggaggaggaagag
gagctggaggaggatgatgacagcctggcagggaagtcacaggacgacaccgcatccccc
acacccgagcctcagggtgcctacgaggacgatgaggatgaggagccacccacctccctg
gccgtgggctttgaccacacccgaaggtgtgttgaggagccaccaggcggtctcttagct
ttggagccgatgccgacttttgggaaggggctggatctccgcagaacagctgaggaaacg
tttgaagttaaagatgtgcttaattctaccttagattctgagactttaaaacagaccctg
tacaggcaggctaagaaccaggcgtatgcaatgatgctgtccctttccgaggacactcct
ctccacacctcttcccagggccctctggacgcttggctgaacatcgcgggagccacgcca
gagtctggagcctttaaccccatcaaccacctctga
DBGET
integrated database retrieval system
