Bubalus kerabau (carabao): 129655340
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Entry
129655340 CDS
T11435
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04136
Autophagy - other
bke04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129655340 (ATG4C)
04136 Autophagy - other
129655340 (ATG4C)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bke01002
]
129655340 (ATG4C)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bke04131
]
129655340 (ATG4C)
03029 Mitochondrial biogenesis [BR:
bke03029
]
129655340 (ATG4C)
Peptidases and inhibitors [BR:
bke01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
129655340 (ATG4C)
Membrane trafficking [BR:
bke04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
129655340 (ATG4C)
Mitochondrial biogenesis [BR:
bke03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
129655340 (ATG4C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
129655340
NCBI-ProteinID:
XP_055441607
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All DBs
Position
6:complement(83157340..83256701)
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AA seq
458 aa
AA seq
DB search
MEATGTDDVDKLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDENELLP
ARSGCTIEDHVIAGNVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLL
AQGLILHFLGRAWTWPDALNIENSDSESWTSNTVKKFTASFEASLSGERELKTPTISLKE
KIERYSDDREMQNEIYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHI
LRKAVEEARHPDLKGITIYVAQDCTVYSSDVIDKQCTSMASDNTNDKAVIILVPVRLGGE
RTNADYLDFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTVGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVN
GHSRDYDFTSTTTNEEDLFSEDEKKRIKRFSTEEFVLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacaggaacagatgatgtcgataagctgaaaactaaatttatatctgcttgg
aacaacatgaaatatagttgggtgttgaaaacgaagacatattttagtagaaattctcct
gtattattacttggaaagtgttaccattttaaatatgaagatgaaaatgaactcttacct
gcaagatcagggtgtacaatagaagatcatgtgattgcaggaaatgtagaagaatttcgt
aaagatttcatttcaagaatatggcttacctacagggaagaatttcctcaaatagaaggc
tcagctttgacaacagactgtggttgggggtgtacattaagaactggccagatgctactg
gctcaagggctcatactacactttcttggtagagcttggacctggccagatgctttgaac
attgaaaattcagactctgaatcatggacttccaacactgtaaaaaaatttactgcatca
tttgaagcatcgctttcaggggagagagaactcaaaaccccaacaatttctctgaaggaa
aaaatcgagagatattctgatgatcgtgagatgcaaaatgaaatttatcaccggaaaatc
atctcttggtttggtgattcccccttggctctctttggtttacatcagctaatagaatat
ggaaagaagtctgggaaaaaagctggagattggtatggaccggctgttgttgctcacatt
ttaagaaaagcagttgaagaagcaagacacccagacttaaaaggaatcactatttatgtt
gcacaagattgtacagtttacagttctgatgtaattgataaacagtgcacttccatggcc
tctgataatacaaatgacaaagctgttattattctagttcctgttagacttggtggagaa
agaaccaatgccgactatttagattttgtaaagggaattttaagccttgaatattgtgtg
ggtattatcggtggcaaacctaaacagtcatattactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc
cctcttgagacattccactgcccttctcccaaaaagatgtcatttcgaaaaatggatcct
agctgtacagtaggattttactgtcgaaatgttcaggacttcaaacgagcttctgaagaa
atcactaagatgctgaaaatttcttctaaggagaaatatcccttatttacttttgtaaat
ggtcattccagagactatgattttacatctactacaaccaacgaagaagaccttttctca
gaggatgaaaagaaaagaataaaaagatttagcacagaagagtttgtcttgctgtaa
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