KEGG   Bubalus kerabau (carabao): 129657549
Entry
129657549         CDS       T11435                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
bke  Bubalus kerabau (carabao)
Pathway
bke03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:bke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    129657549 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bke03021]
    129657549 (TAF5L)
   03036 Chromosome and associated proteins [BR:bke03036]
    129657549 (TAF5L)
Transcription machinery [BR:bke03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     129657549 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     129657549 (TAF5L)
Chromosome and associated proteins [BR:bke03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     129657549 (TAF5L)
    STAGA complex
     129657549 (TAF5L)
    TFTC complex
     129657549 (TAF5L)
    SAGA complex
     129657549 (TAF5L)
    SLIK complex
     129657549 (TAF5L)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_Gbeta Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd TFIID_NTD2 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_Aladin WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_IFT140_1st NBCH_WD40 Tricorn_2nd Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_RFWD3 PEP5_VPS11_N PROPPIN eIF2A WD_LRWD1 Ge1_WD40 Nbas_N Beta-prop_IP5PC_F Mala_s_1-like vATP-synt_AC39
Other DBs
NCBI-GeneID: 129657549
NCBI-ProteinID: XP_055443827
LinkDB
Position
1:complement(124639056..124670823)
AA seq 605 aa
MNCSSSGSSVHGILQVMKRVRTEQIQMAVSCYLKRRQYGDADGPLKQGLRLSQSTEEMAT
SLTVQSESGCANIVSAAPCQAEPQQYEVQFGRLRNFLTDSDSQHSHEVMPLLYPLFVYLH
LNLIQNSPKSTVESFYSRFHGMFLQNASQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYV
VRLQEDSYNYLLRYLQSDNNTALCRILAWHIHLDVQPAKRTDYQLYTSGSSSRGEGGGLE
PADMPAPILQNEAALELLQESIKRVRDGPPSLTTIYFYAFYNTEQLLNTAEVSPDSKLLA
AGFDNSCIKLWSLRSKKLKSEPHQVDVSRIHLACDFLEEEDDEDDNLGTEMKVLRGHCGP
VYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISPHSLYFASGSH
DRTARLWSFDRTYPLRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLF
TGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSL
VASASMDNSVRVWDIRSSHCSTPADGSSSELVGVYTGQMSNVLSVQFMACNLLLVTGITQ
ENQEH
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgaactgtagctcatcaggctcctctgtccatgggattctccaggtcatgaaacgggtc
cgcacggagcagatccagatggccgtgtcctgctacctcaaacgccggcagtacggggat
gcggacggcccgctgaagcaaggcctgcggctgtcgcagagcactgaggagatggccacc
agcctcacagtccaatcagaatctggttgtgccaacatagtgtccgcagccccttgccag
gcagagccccagcaatatgaagtacagttcggacggctgcggaattttctcaccgattct
gactcccagcacagccatgaagtgatgcctctcctctatcctctctttgtctacctccat
ctcaacctgatccagaacagtccgaagagcacagtggaaagcttttacagccgcttccat
ggaatgtttctgcagaacgccagccagaaggatgttatcgagcagctccagaccactcag
accatccaggacatcctgtctaacttccggctgcgagccttcctggacaacaaatacgtg
gttcgtctgcaggaagacagctacaactaccttctccgctacctccagagtgacaacaac
accgcgctgtgcaggatccttgcctggcacatccatctggacgtgcagcccgccaagagg
acagactaccagctctacaccagtggtagctcctcccgcggcgagggtggcggcctggag
cccgccgacatgcccgcgcccatcctgcagaatgaggccgcgctggagctcctgcaggag
agcatcaagcgcgtcagggacggccccccctccctcaccaccatctacttctacgccttc
tacaacacggagcagctgctgaacactgcagaggtatccccggacagcaagctgctcgca
gcaggctttgacaactcctgtataaaactgtggagtctgcgttccaagaagttaaagtcc
gaaccccatcaagtagatgtgtcccgcatccacttggcttgtgatttcctagaggaggag
gatgacgaggacgacaacttaggcacagagatgaaggtccttcggggacactgcgggcca
gtgtacagcaccaggttcctcgcagacagctcggggctgctctcctgctctgaagacatg
tccatcaggtactgggacctgggcagcttcaccaacaccgtgctgtaccagggccacgcc
taccccgtgtgggacctggacatcagcccgcacagcctgtacttcgccagcgggtcccac
gaccgcacggcccggctgtggtcatttgatcggacgtacccgctgcgaatctacgccggg
cacctggcagacgtggactgcgtcaagttccaccccaattcaaactacttagccacgggc
tcaaccgacaagacggtgcggctgtggagcactcagcaggggaactccgtgaggctcttc
acgggccaccgcggccctgtgctctccctggctttttcccccaacggtaagtacctggca
tcagcaggcgaggaccagcggctgaagctgtgggacttggcgtccgggaccctctacaaa
gagctgcggggccacacggacaacatcaccagcctcaccttcagcccagacagcagcctg
gttgcgtcagcgtccatggacaactccgtgcgtgtctgggacatcagaagctcacactgt
agcacacccgccgacggctcatccagcgagctcgtgggcgtctacaccggccagatgagc
aatgtgctgagcgtgcagttcatggcctgcaacctcctgctggtgactggaatcacacaa
gaaaatcaggaacattga

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