Bubalus kerabau (carabao): 129657712
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Entry
129657712 CDS
T11435
Symbol
DHX15
Name
(RefSeq) ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bke Bubalus kerabau (carabao)
Pathway
bke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129657712 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bke03041
]
129657712 (DHX15)
03009 Ribosome biogenesis [BR:
bke03009
]
129657712 (DHX15)
Enzymes [BR:
bke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
129657712 (DHX15)
Spliceosome [BR:
bke03041
]
Complex A
U2 snRNP components
U2 related factors
129657712 (DHX15)
Complex B
129657712 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
129657712 (DHX15)
Ribosome biogenesis [BR:
bke03009
]
Eukaryotic type
90S particles
Helicases
129657712 (DHX15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
SRP54
AAA_29
Cas3-like_C_2
nSTAND3
Atrophin-1
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
129657712
NCBI-ProteinID:
XP_055444128
LinkDB
All DBs
Position
7
Genome browser
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagcgacaccggttggacctgggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaggatcgggatcgtgaccgtgaccgtgaagatcggtctaaagatcga
gaccgagaaagagatagaggagatagagagcgggaaagggagaaagaaaaggagaaggaa
ttgcgagcttcgacaaatgctatgcttatcagtgctggattaccacctttaaaagcttcc
cattcagctcactcaacccactcggcacattcgacacattcgacacattctgcgcattca
acacacaccggacatgcaggacacacgtcacttccacagtgcattaatccatttaccaac
ttaccccacacacctcgatactatgatattctgaagaaacgacttcagctccctgtttgg
gaatacaaggataggtttacagatattctggttagacatcagtcctttgtacttgttggt
gagacagggtctggtaaaacaacacagattccacagtggtgtgtggagtacatgcgatca
ttaccaggacccaaaagaggagttgcctgtacccaacccaggagagtggctgcaatgagt
gtggctcagagagttgctgatgaaatggatgtgatgttgggccaggaagttggttactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatgggatg
ctacttcgtgaagcaatgaatgaccctctcttggagcgttatggtgtaataattcttgat
gaggctcatgaaaggacattggctacagatattctcatgggtgttctgaaggaggttgtt
agacagagatcagatttaaaggttatagttatgagtgctactctggatgcaggaaaattc
cagatttactttgataactgtcctctcttaactattcctgggcgtacacatcctgttgag
atcttttatactcccgaaccagagagagattatcttgaagcggcaattcgaaccgtgatc
caaattcatatgtgtgaagaggaggaaggagatctgctacttttcttaactggtcaagag
gaaatcgatgaagcctgtaagagaataaagcgtgaggttgatgatttgggccctgaagtt
ggtgacatcaaaatcattccattatactccacactcccacctcagcagcaacagcgcatc
tttgagcctccacctccaaaaaaacagaatggagcaattggaagaaaggtagttgtgtca
actaacattgcagagacatctttgacaatagatggtgtggtgtttgtaattgatcctgga
tttgcaaaacaaaaggtgtataatcctcgaatcagagttgagtcccttttagtgacagcc
attagtaaagcttcagctcagcaaagggctggtcgagcaggacgaaccagacctggaaag
tgcttccgactttatacagagaaagcttacaaaacagagatgcaggataatacctatcct
gagattttgcgttctaatttaggatcagttgtgttacagttgaagaaacttggtattgat
gatttggtgcattttgattttatggatccaccagctcctgaaactctgatgagagcccta
gaacttttgaattatctggctgctttaaatgatgatggagatctgactgaattgggatcc
atgatggctgagtttcctctagatccacagctcgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgtcccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtctaccatgcttttaaacaaaatcatgagtcg
gttcagtggtgttatgacaacttcattaactacaggtccctgatgtcagcagataatgta
cgccagcagctgtcaagaattatggacagatttaatttgcctcgtcgaagtactgacttt
acaagcagggactattatattaatataagaaaagctttggttactgggtattttatgcag
gtggcacatttagaacgaacagggcattacttaactgtgaaagataaccaagtggttcag
ttgcatccctctactgttcttgaccacaagcctgaatgggtgctttataatgagtttgtt
cttacaacaaagaattacatccggacgtgtacagacatcaagcctgaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgcatcattgccaaactgcaatccaaggaatattcacagtactga
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