Bubalus kerabau (carabao): 129658783
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Entry
129658783 CDS
T11435
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
bke Bubalus kerabau (carabao)
Pathway
bke04340
Hedgehog signaling pathway
bke04360
Axon guidance
bke05200
Pathways in cancer
bke05205
Proteoglycans in cancer
bke05217
Basal cell carcinoma
bke05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
129658783 (SHH)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
129658783 (SHH)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
129658783 (SHH)
05205 Proteoglycans in cancer
129658783 (SHH)
09162 Cancer: specific types
05226 Gastric cancer
129658783 (SHH)
05217 Basal cell carcinoma
129658783 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bke01002
]
129658783 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bke00536
]
129658783 (SHH)
Peptidases and inhibitors [BR:
bke01002
]
Cysteine peptidases
Family C46: hedgehog family
129658783 (SHH)
Glycosaminoglycan binding proteins [BR:
bke00536
]
Heparan sulfate / Heparin
Morphogens
129658783 (SHH)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
VldE
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
129658783
NCBI-ProteinID:
XP_055445603
LinkDB
All DBs
Position
8:complement(120889046..120898253)
Genome browser
AA seq
464 aa
AA seq
DB search
MDEMLLLARCLLVLLVSSLLMCSGLACGPGRGFGKRRNPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDEGRLLYSD
FLTFLDRDRGAKKVFYAIETREPRERLLLTAAHLLFVAPHNGSAAGAPEGAAAAAAAAAA
GGGAPGRRALFASRVRPGQHVYVVAERGGARRLLPAAVHSVTLREETAGAYAPLTAHGTI
LINRVLASCYAVIEEHSWAHGAFAPYRLAHALLAALAPGRTDRGGAGDGGGGGRVPPPTP
GAPGAADVPGAAGIHWYSELLYQIGTWLLDSEALHPLGMAVKSS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatgctgctgctggcgagatgtctgctggtgctgctggtctcctcgctgttg
atgtgctcggggctggcgtgcggacccggcaggggatttggcaagaggcggaaccccaaa
aagctgacccctttagcctacaagcagtttatccccaacgtggcggagaagaccctaggg
gccagtggaagatatgaggggaagatcaccagaaactcagaacgatttaaggaactcacc
cccaattacaaccccgacatcatatttaaggatgaagaaaacactggagcggaccggctg
atgactcagagatgcaaggacaaactgaacgccttagccatctccgtgatgaaccagtgg
ccgggcgtgaagctgcgggtgaccgaaggctgggacgaggacggccaccactcggaagag
tcgctgcactacgagggccgcgcggtggacatcaccacctctgaccgcgaccgcagcaag
tacggcatgctggcgcgcctggccgtagaggccggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtgaaagcagagaactcggtggcggccaagtcgggcggc
tgcttcccgggctcggccacggtgcacttggagcagggcggaaccaagctggtgaaggac
ctgcggcccggggaccgcgtgctggcggccgacgacgagggccggctgctctacagcgac
ttcctcaccttcctggaccgcgaccgcggcgccaagaaggtcttctacgccattgagacg
cgggagcctcgcgagcgcctgctgctcaccgccgcgcacctgctcttcgtggcgccgcac
aacggctcggccgcgggggcgcccgagggggcggcggcggcggccgcggcggcggcggcg
ggcgggggcgcgccggggcgccgggcgctcttcgccagccgcgtgcggccgggccagcac
gtgtacgtggtggccgagcgcggcggggcccggcggctgctgcccgccgcggtgcacagc
gtgacgctgcgcgaggagacggcgggcgcctacgcgccgctgacggcgcacgggaccatc
ctcatcaaccgggtgctggcctcgtgctacgcggtcatcgaggagcacagctgggcgcac
ggggccttcgcgccctaccgcctggcgcacgcgctcctggccgcgctggcgcccgggcgc
acggaccgcggcggagccggcgacggcgggggcggcggccgcgtccccccgcccacgcct
ggggcgccgggggcggccgacgtgccgggcgccgcgggcatccattggtactcggagctg
ctctaccaaataggcacctggctgttggacagcgaggctttgcatccgctgggcatggcg
gtcaagtccagttga
DBGET
integrated database retrieval system
