Bubalus kerabau (carabao): 129658884
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Entry
129658884 CDS
T11435
Symbol
VPS50
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
bke Bubalus kerabau (carabao)
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bke04131
]
129658884 (VPS50)
Membrane trafficking [BR:
bke04131
]
Protein recycling
Others
EARP complex
129658884 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
SAC9_GBDL_2nd
Motif
Other DBs
NCBI-GeneID:
129658884
NCBI-ProteinID:
XP_055445699
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All DBs
Position
8:13456989..13595775
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AA seq
963 aa
AA seq
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MQKIKSLMTRQGLKSPPESLSDLGAIESLRVPGKEEFRELREQPSDPQAEQELINSIEQV
YFSTDSFDIVKYELEKLPPVLNLQDLEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAAICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIELLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYRLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSTSEG
SNMGAEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIISR
LMQVGEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPVKSNFSIL
QLHEFKFMEQSRSPSVSPSKQSSATSSKTVTLFEQYCSGGNPFEIQADHKDEETEDVLAS
NGYESDEQEKSAYQEYDSDSDVPEELKRDFVDEQTGDAPVKSVSRETLKSRKKSDYSLNK
VNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSLE
STGLGLSSSRLRTTLNRIQESLIDLEVSADGAAPLTAAEERKEKVPSPHLSHLVVLASGD
TLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPIY
WIVAGKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDTLLKEFEQFNMRLNEVSKRVRIPL
PVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDKE
FVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLSAIDDIDR
PKR
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaatcaaatctcttatgacccggcagggtctgaaaagtcctccagagagcctc
agtgatcttggtgccattgagagtctccgggtacctggaaaggaggaattccgagaactt
cgagaacagcctagtgaccctcaagctgaacaagaactaattaatagtattgaacaagtg
tatttttctacagattcatttgatattgttaaatatgaactggagaagctccctcctgtt
ctcaatttgcaagacttagaggagtacagagacaaattgaaacaacagcaagctgcagtc
tcaaaaaaagtagcagatttaatccttgaaaaacagcctgcttatgtcaaggaacttgaa
agagttacctcattacaaacagggcttcagttagctgctgctatctgcaccaatgggagg
agacacttgaatattgcaaaggaaggttttactcaagctagtttaggcctccttgcaaat
cagaggaaacgtcagttgctgattgaacttctgaaatctctgagaacgataaaaacattg
caaagaacagatgtccgcttaagtgaaatgctggaggaggaagactatccaggagctatt
cagctgtgcctggaatgtcagaaagctgccagcacttttaaacattacagttgcataagt
gaactgaattcaaagttgcaagatactttagaacaaattgaggaacagttggatgttgct
ctgtccaaaatatgcaagaattttgacattaaccactacaccaaagttcaacaagcttat
cgacttcttggaaaaacacagacagcaatggaccaacttcatatgcacttcacccaagcc
attcataatactgtgtttcaagttgttcttggctatgtggaactatgtgcaggaaacaca
gatacaaaattccaaaagctgcaatataaggatctctgtacgcatgttacaccagacagc
tatattccatgccttgctgacctgtgcaaagccctgtgggaagttatgctcagctattac
aggactatggaatggcatgaaaagcatgataatgaggatactacttctacttctgaaggg
agtaatatgggtgctgaagagacaaattttgatcgtggctacataaaaaagaaattagaa
catggacttacacgaatatggcaggatgttcagctaaaagttaaaacctacttgcttgga
actgatttgtctatattcaaatatgatgatttcatctttgttttggatataatcagcagg
ttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagaatctatt
agaaaacaaagtgtcaattattttaagaactaccatagaacgaggcttgatgaactgaga
atgtttctagagaatgagacctgggagctttgtcctgtgaagtcaaatttcagcatcttg
caacttcatgaatttaaattcatggaacagtctcgttccccatcggtttcacccagtaag
cagtcatctgcaacttcctcaaaaacagtaaccttgtttgagcagtactgcagtggtgga
aatccatttgaaattcaggcagaccacaaagatgaagaaacagaagatgtcctggcttct
aatgggtatgaatctgatgaacaggaaaaaagtgcctatcaggaatatgacagtgacagt
gatgttcctgaggaactaaaacgagattttgttgatgagcagacaggcgatgctcctgtg
aaaagtgtttctcgagagaccctaaaaagcaggaagaaatcagattacagtctaaataaa
gtgaatgcacccatcttaacaaatacaacattgaatgtaataaggcttgttggtaaatat
atgcagatgatgaacattcttaagccaattgcttttgatgttatccatttcatgtctcag
ctctttgattattacttgtatgcaatatataccttttttggtcggaatgattcattggaa
tcaacaggactaggtcttagtagtagtagactaagaacaactctaaacaggatacaagaa
agcctcattgatctggaggtttcggctgatggcgccgccccgctcacagcagcagaagag
aggaaggagaaggtgccgagtcctcacctgagccacctagtggttttggcctccggggac
acactgtatgggttggcggaaagagtggtcgccacagaatccttggtattcttggctgaa
cagtttgagttccttcagcctcatctggatgctgtgatgcctgcagtcaaaaaacccttt
cttcagcagttttattctcagacggtctcaacggccagtgaactacgcaaaccaatttac
tggatcgtagctggtaaagccattgattatgaacagatgctgctgctgatggctaatgtg
aaatgggatgtaaaagaaattatgtcacagcacaacatatatgtagatacgctgttaaag
gaatttgagcagtttaacatgcggttaaatgaagtttctaagagagttcggatacccttg
cccgtgtctaatatactttgggaacattgtatacgcctggctaatagaactattgtggaa
ggatacgccaacgtcaagaagtgtagtaatgagggtcgtgccttgatgcaattggatttt
caacagtttttaatgaaacttgaaaagctaactgatatcagacccattccggataaagaa
tttgtggaaacctacattaaagcatactacctaactgagaatgacatggaacgctggatc
aaagagcacagggagtattcaacaaagcagctgaccaacctggtaaatgtttgcctggga
tcccatatcaataagaaagcaagacaaaaacttctctcggctatagatgatatagacaga
cccaaaagataa
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