Bubalus kerabau (carabao): 129659200
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Entry
129659200 CDS
T11435
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
bke Bubalus kerabau (carabao)
Pathway
bke05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
bke00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
129659200 (JMJD1C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bke03036
]
129659200 (JMJD1C)
Chromosome and associated proteins [BR:
bke03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
129659200 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
129659200
NCBI-ProteinID:
XP_055446337
LinkDB
All DBs
Position
1:complement(142467237..142784824)
Genome browser
AA seq
2545 aa
AA seq
DB search
MAVETRPELVGKRFLCLALGEEARLERGESGRCWRGWRAGVIRAVSHRDSRNPDLAVYVE
FDDLEWDKREWVKVYEDFSTFLVEYHLIWARRINPSQTQGSKSKQIQWPALINTSFGFCI
QTFKPLVEKSVPSSITAVEFLVDKQLDFLTEDSAFQPYQDDIDSLNPVLRDNPQLQEEVK
VWVKEQKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFTRTMIVMNDQVLEP
QNVDPSMVQMTFLDDVVHSLLKGENIGITSRRRSRASQNSNTVHGHYTRAQANSPRPAMN
SQTAVPKQNSHQQQRNIRPNKRKGSDSSIPDEEKMKEEKYDYIARGENPKGKKQVMNKRR
KAEEDEKKLNMKRLRTDNVSDFSESSDSENSNKRIINNSSEQKPENELKNKNTSKINGEE
GKSQNNEKTEETLIDSQHPWDQIQEDKKHEETEKQKSVDFQRQEKMIIHSSEQATLSDHN
SSDLLLQERNTEKTHTMELLPKEKFVSRPPTPKCVIDITNDTNTEKVAQETSSSTFGLQT
LQKMDPNVSDSKHSIANTKYLETGNQDSDQNWVSDIVKVDLTQSNVRNASSGNENLSMEK
EKNQYVSYLSSLSAVSVTEDKLPKQSPPPETIKSKLNTSVDAHKTKSNSSPEVVKPKVNH
SPDSVKSKATYANSHAAGERRPANKIEHELSRCSFHPVPTRGSTLETTKSPLIIDKNEHF
TVYRDPALIGSDTGANHISPFLSQHPFPLHSSSHRTCLNPGTHHPALTPAPHLLAGSSSQ
TPLPTINTHPLTSGPHHSVHHPHLLPTVLPGVPTASLLGGHPRLETAHASSLSHLALAHQ
QQQQLLQHQSPHLLGQAHPSASYNQLGLYPIIWQYPNGTHAYSGLGLPSKWVHPENAVNA
EPSLRRNSPSPWLHQPTPVTSADGIGLLSHIPVRPSSAEPHRPLKIAAHSSPPLTKCLVD
HHKEELERKAFIEPLRSVASTSAKNDLDLNRSQTGKDGHLHRHFVDPVLNQLQRPPQETG
ERLNKYKEEHRRILQESIDVAPFTTKIKGLECDRDNYSRVASSSSSPKSHVIKQDKDIES
DLYKMKHSVPHSLPQSNYFTTLSNSVVNEPPRSYPSKEISNIYTEKQSNTLATAANPQTL
TSFISSLSKPPPLIKHQPESEGLVGKVPEHLSHQIASHSVTTFRNDCRSPTHLTVSSTNT
LRSMPALHRAPVFHPPIHHSLERKESSYSSLSPPTLTPVMPVNAGGKVQESQKPPTLIPE
PKDTQASFKSSSEQSLTEMWKSNNNLSKEKAEWRVEKSSGKSQAATASVIVRPPSSTKLD
SVPAVQLASKERVSERSSLGANQTDCLKPAEAGESGRVILPSVNSDSAHIKSEKNFQAVS
QGSVPSSVTSAVSTVCNTKTDTFTSAATAPGVSSWGGSEIIYSLSNTILASKSLECTSSK
SVSHSVTQTQECTVSIAAPVTPASSKTGSAVQPSSGFSGTTDFIHLKKHKAALAAAQYKS
SNVSETEPNAAKNQTSSASHLLDSAVVCSTINKADSVGNGQASQTSQPNYHTKLKKAWLT
RHSEEDKNTNKMENSGSSVSEIIKPCSVNLIASTSNDLQNSVDSKIIVDKYVKDDKVNRR
KAKRTYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQKRKGEMEEDLKPNGILSR
SAKEKSKLKLQSNNNSAGIPRSVLKDWRKVKKLKQTGESFLQDDSCCEIGPNLQKCRECR
LIRSKKGEEPTHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPDQYDDEAMSLWTHENYEDD
ELDIETSKYILDIIGDKFCQLVTSEKTALSWVKKDAKIAWKRAVRGVREMCDACEATLFN
IHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPHDHKHLMPTQIIPGSVLTD
LLDAMHTLREKYGIKSHCHCTNKQNIQVGNFSPMNGVSQVLQNVLNHSNKISLCMPESQQ
QSTPQKPESNGSSSPGSDVSTDSKLTPPESQSPLHWLADLAEQKAREEKKENKEFALEKQ
IKEEREQDDPDSPNSRTSPPVSQNNEQGSTLRDLLTTTAGKLRVGSTDAGIAFAPVYSMG
TPSGKSGRTMPNILDDIIASVVENKIPPNKASKINVKSEFKEEPKESRKSAMDENNKLYS
DIPHSWICEKHILWLKDYKNTNNWKLFKECWKYGQPAVVSGVHKKMNISLWKADSISLDF
GDHQADLLNCKDSIISNANVKEFWDGFEEVSKRQKTKSGETVVLKLKDCPSGEDFKTMMP
ARYEDLLKSLPLPEYCNPEGKFNLASHLPGFFVRPDLGPRLCSAYGVAAAKDHDIGTTNL
HVEVSDVVNILVYVGIAKGNGILSKAGILKKFEEEDLDDILRKRLKDSSEIPGALWHIYA
GKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVKTCTLVQFLG
DAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVQSFHLTQELRLLKEEINYDDKLQVKNI
LYHAVKEMVRALKIHEDEVEAMEEN
NT seq
7638 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagacgcggccggagctggtggggaagcggttcctttgcctggcgcttggc
gaagaggcgcggctggagcgcggggagagcggacgctgctggcggggctggcgagcgggg
gttatccgagcggtgtcacacagggacagccgcaatcccgacctggcggtgtatgtggaa
tttgatgatcttgagtgggataaacgagagtgggttaaagtttatgaagatttttcaacc
ttcttggtggaataccacttaatctgggccagaaggatcaaccctagccagactcaggga
tcaaagagcaaacagattcagtggcctgcattgatcaacaccagttttggattctgtatt
cagactttcaaacccctggttgaaaaaagtgtacccagttcaatcactgcagtagaattc
cttgtagataaacaactggattttttaactgaagatagtgcctttcagccctaccaggac
gacatagacagcctaaacccagttctcagggacaacccgcaacttcaggaagaagtgaaa
gtctgggtaaaggaacaaaaggttcaggagatttttatgcaaggtccttactccttgaat
ggatacagagtgagagtatatagacaagactctgccacccagtggttcactggcataatt
actcatcatgatctcttcactcgcaccatgatcgttatgaatgatcaggtactagaacca
cagaatgtcgatccttctatggttcaaatgacctttctagatgatgttgttcactctttg
ttaaaaggtgaaaatattggcattacatcacggcgaaggtctcgtgccagtcaaaatagc
aacactgttcacggtcattatacacgtgcccaagcaaatagtcccagaccagcaatgaac
tcccaaactgctgtaccaaaacagaattcacaccagcaacaaagaaatattcgtccaaat
aagaggaagggctcagatagcagtataccagatgaagagaagatgaaggaggaaaaatat
gattatatagcacgaggagaaaatcctaaaggtaaaaaacaggtgatgaacaaaagaagg
aaagctgaggaggatgaaaagaaactaaatatgaaaagactgcgaaccgacaatgtttca
gacttttctgagagtagtgactcagaaaattcaaataagagaataataaataattcctca
gagcagaagccagagaatgagttgaaaaataaaaacacttcaaagataaacggagaagaa
ggaaaatctcagaataatgaaaagacagaagagacactaatagatagccagcatccctgg
gatcaaatacaggaagataaaaaacatgaagaaacagagaaacagaagtctgttgacttt
cagcgtcaagaaaaaatgattatccattcatcagaacaggccacactttctgatcataat
tctagtgatttacttcttcaggaacgtaacacagagaagacacacacaatggagttatta
ccaaaggagaagtttgtatccagaccgcccactccaaaatgtgttattgatattacaaat
gacactaacacagaaaaggtggctcaggaaacctcaagtagtacctttggccttcaaaca
cttcagaaaatggatcctaatgttagtgattcaaaacattcaattgcaaatacaaaatac
ttggaaacaggaaaccaagattctgaccagaactgggtcagtgatatagttaaagtagat
ttaacccaatcaaatgtaaggaatgcttcttcaggaaatgaaaacttgagtatggaaaaa
gagaaaaatcagtatgtctcttacttatcttctctaagtgctgtttctgtcacagaagat
aagctgcctaagcaaagtccacccccagaaactataaaatctaaacttaatacttcagta
gatgctcacaagacaaaatccaattcctcgcctgaagttgttaagcctaaagtcaaccat
tcccctgattctgtaaagtctaaagccacttatgcaaacagccacgctgctggtgaaaga
agaccagcaaataagatagaacatgagttatcaagatgcagttttcacccggttcctact
agaggcagtacattagaaactacaaaaagccctctaatcattgataaaaatgaacatttt
acagtttacagagatcctgcacttattgggtcagatacaggagctaaccacatttcacct
ttcttaagccagcatccttttcctcttcattcttcatcccatagaacatgtttaaatcca
ggtacccatcatcctgccttaactcctgcaccccacttactggctggatcatccagtcaa
actccattacctaccattaacactcaccctctgactagtggtccacaccactctgttcat
caccctcatttacttcctactgtgttacctggagtgcctactgcctccttacttggtggc
cacccacgactagagactgctcacgccagcagcttgagccacttagcattagcacaccag
caacagcaacagttgttacagcaccagtcacctcatcttcttggacaagcccatccatct
gcttcatataatcagcttggactttatccaattatttggcaatatccaaatggaacacat
gcatactcaggacttggtctgccttctaagtgggttcacccagaaaatgcagttaatgct
gaaccttcattaaggaggaattctcccagtccttggttacatcagcctacccctgtgacc
tcagcagatggtattggattacttagtcacattcctgtcagaccttccagtgcagaacct
catcggcctcttaaaatcgcagcacattccagtccaccactgacaaaatgtttagtagat
caccataaagaagaattggagaggaaagctttcattgaaccattgcgttctgttgcatcc
acatcagccaaaaatgacctggatctaaataggtcacagactggaaaagatggtcacttg
cataggcattttgtggatcctgtattgaatcaattacagagaccaccccaggaaactgga
gagagattaaacaaatataaggaggaacaccgtcgaattcttcaagaaagtattgatgtt
gctccctttacgactaaaatcaaaggtcttgagtgtgacagagataattactccagggta
gcatcgtcatcttctagccctaagagccatgtcatcaaacaagacaaggatatagaatca
gatctttataaaatgaagcactcagtgcctcacagtttgcctcaaagtaactatttcact
acattgtctaatagtgtagtcaatgaaccaccaaggtcatacccatccaaagagatttca
aatatttacactgaaaaacagagtaatacccttgcaacagcagctaatcctcaaactctg
acttcatttatatcatctctttcaaagcctccacctttgataaaacatcagccagaaagt
gaaggtttagtaggcaaggtaccagaacatctttcccatcaaattgcttctcactcagta
acaactttcagaaatgactgtaggagtcctactcatttgacagtttcttctacaaataca
ctccggagtatgcctgctttacatagagcaccagtatttcacccgccgatccatcatagc
ctggaaagaaaggaaagcagctatagtagcctttcccctccaacgttaactccagtgatg
cctgtaaatgctggtgggaaagttcaagaatcacaaaagcctcccacactgattcctgag
ccaaaagatactcaggcaagttttaagagttcttctgaacagagtttgacagaaatgtgg
aaatctaataataacctcagcaaagagaaagctgaatggcgtgtagagaaaagcagcgga
aagtcccaggctgccacggcgtctgtcatcgtgcgtccaccttcgagtacgaaacttgac
agcgtgccagcagtacagttagcttccaaagagcgagttagtgaaagatcttcacttggg
gcaaatcaaacagattgcctcaaaccagcagaagctggagagagtggaagagtcattctg
ccaagtgtgaattcagacagtgctcacataaaatccgaaaaaaactttcaggctgtctca
cagggcagtgttcccagttcagtcacgtctgctgtaagtacagtgtgtaataccaaaacg
gatacattcacatctgctgccactgcccccggtgtttccagctggggtggttcagaaata
atttactcattatcaaataccattttggcctctaaatccttagaatgtacctcttcaaaa
agcgtcagtcattcagtgactcaaacacaagaatgcacggtcagcatcgcagctccagtt
acaccagccagtagtaagacaggaagtgctgttcagcccagctctgggttttcaggcaca
actgattttattcatttaaagaagcacaaggcagcattggccgcagctcaatataaaagt
agtaatgtcagtgagactgagcctaatgctgcgaaaaatcagacgtcttcagcctcccat
ctcttagatagcgctgtagtctgtagtacaataaacaaagcagactctgtaggaaatggg
caagcatcccagacaagtcaaccaaactaccatactaaactgaaaaaagcctggcttacg
agacattcagaagaagataaaaatactaataaaatggaaaattcagggagttctgtatca
gaaattattaagccatgttctgtcaatttaatagcctctacatctaatgatctacaaaat
agtgtggatagtaagatcatagttgataaatatgtaaaagatgataaagtaaatagaaga
aaagccaaacgaacttatgaatctggctccgaaagtggagattcggacgaaagtgaaagc
aaatcagagcaaaggactaaaaggcaacctaagccaacttacaaaaagaagcaaaatgat
cttcaaaagagaaaaggtgaaatggaagaagatttaaaacccaatgggattctcagcagg
agtgccaaagaaaaaagtaaattgaagttgcagagcaacaataatagtgctggcatccct
cgttcagtactgaaagattggcgtaaagtcaagaagctgaagcaaactggggaatccttt
ttacaggatgactcctgctgtgagatagggcctaatttgcaaaagtgccgagaatgtaga
cttattcggagtaaaaagggagaagaaccaactcactcaccagtgttttgtagattttac
tactttagacgattgtcatttagtaaaaatggagtggttagaatagatggtttctcttct
cctgaccagtatgatgatgaagctatgagtttatggacacatgaaaattatgaagatgat
gaactagacatagaaacgtcaaaatacatcttggacataataggtgataagttctgtcag
ttggtaacatctgaaaaaacagctttgtcctgggtgaaaaaggatgccaaaattgcctgg
aaaagagcagtgaggggagtccgggagatgtgtgatgcatgtgaagcaacattgttcaac
attcactgggtctgccaaaaatgtggatttgtggtctgcttagattgttacaaggcaaag
gaaaggaagagttctagagataaagaattgtatgcttggatgaagtgtgtgaaggggcag
cctcatgatcacaaacatttgatgccaactcaaattatacctggttctgttttgacagat
cttttggatgcgatgcacactcttagagaaaaatatggtattaaatcccattgtcattgt
actaacaaacagaatatacaagttggaaatttttctcctatgaatggtgtgtctcaagtt
ttacagaatgttcttaatcacagtaataaaatttctctgtgcatgcctgagtctcagcag
caaagtacccctcagaagcctgaaagtaatggcagcagcagtccagggagtgatgtgagc
acagacagcaagttaactcctccagagtcccagtcacccctgcactggttagcagatctt
gcagagcaaaaggccagagaggaaaaaaaagaaaacaaagaatttgcccttgaaaagcaa
ataaaagaagagagagaacaagatgatcctgattctccaaatagtagaacatcacctcct
gtatcccagaataatgagcaaggttcaacattacgagatttgctgaccacaactgctggc
aagctacgcgtgggttctacagatgctggcattgcctttgcaccagtttattcaatggga
acccccagtggtaaaagtggaaggactatgccaaacattcttgatgacataattgcttca
gttgttgaaaacaaaattccaccaaataaagcctctaagataaatgtaaaatcagagttc
aaagaagaacccaaagaaagcagaaaatctgccatggatgaaaacaacaaattgtacagt
gatataccacattcttggatctgtgagaagcatattctgtggcttaaagattataaaaat
actaataattggaagcttttcaaagagtgttggaaatatggacaacctgcagtggtttct
ggcgtgcataagaaaatgaacattagcttgtggaaggcggactcaattagtcttgatttt
ggagaccaccaagctgatctcctcaactgcaaagacagcattatttcaaatgccaatgtt
aaggaattctgggatggttttgaggaagtttcaaaacggcaaaaaacaaaaagtggagaa
acagttgttttaaaattgaaagactgcccttcaggagaagacttcaagactatgatgcca
gcaagatatgaagatcttttaaaaagcctgccattgccagaatattgtaatccagaagga
aaattcaacctggcctctcatttaccggggttctttgtgcgccctgatctaggacccagg
ttgtgcagtgcttatggtgtagctgctgctaaagatcatgatataggaacaacaaatcta
catgttgaagtttctgatgttgtaaatattctagtctatgttggcatagcaaaaggaaat
ggcattctctcaaaagcaggaatactcaagaaatttgaggaagaagatttggatgacatt
ttaagaaaacgattgaaggactcaagtgaaatacctggtgctctgtggcatatttatgct
gggaaagatgttgacaagatacgggaatttcttcagaagatttcaaaagaacaaggcctt
gaagttctaccagaacatgatccaatacgtgaccagagttggtatgtaaacaaaaagctt
cgtcaaagactgcttgaggaatatggagtcaaaacctgcactcttgttcagttccttggt
gatgccattgtcttaccagcaggagcacttcatcaggtacagaattttcacagctgtatt
caggtaactgaagactttgtgtctccagaacatctcgtacagtcatttcatttaacacaa
gaactgagacttttgaaggaagaaatcaattatgatgataaactacaggttaaaaatatc
ttgtatcatgcagtcaaggaaatggtgagagctttgaagatacatgaagatgaagtagag
gctatggaagaaaattag
DBGET
integrated database retrieval system
