Brachybacterium kimchii: M4486_05440
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Entry
M4486_05440 CDS
T08303
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
bki
Brachybacterium kimchii
Brite
KEGG Orthology (KO) [BR:
bki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bki03051
]
M4486_05440 (pafA)
Enzymes [BR:
bki01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
M4486_05440 (pafA)
Proteasome [BR:
bki03051
]
Prokaryotic proteasome
Bacterial regulatory particles
M4486_05440 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UQN30746
UniProt:
A0ABY4NAC7
LinkDB
All DBs
Position
1100616..1102001
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AA seq
461 aa
AA seq
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MERRIGGLETEFGLVCVRADGTRALEPEAAARELFRPVVAQGRSSNVFLRNAARLYLDVG
SHPEYATAECDDWWELVAQDKAGERILADLMARANAALAERGEDARIHLFKNNVDHEGNS
FGSHENYLVDRRGEFTRLPRILLPFLATRQIVTGAGGVVTEEDGGSRFVFSRRSDHMWEA
VSSATTRTRPLINTRDEPHGDPTRFRRLHVIVGDSTMSEVSTWLRFATTDLVLRLIESGR
AVDVPELEDTISAIRVVARDLPGTEPLPLASGRTASALQIQQRYLDLVAPLAREDEHDVL
ETWQRALDAVLTGDRSWAAQTLDWAIKERLFTQVAARHGLALGDPRIERLDLAYHDIDPE
QGLAASLRRRGQAPSVLSETAIESARAAAPATTRAHLRGRFVTASEEAHVDHVADWTTMR
LVRQGAMPVSVMDPFQTESEQVDALIAQIRAHGSTDAAPPA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggagcgccgcatcgggggactggagaccgagttcgggctcgtgtgcgtgcgggccgac
ggcacgcgcgccctcgagcccgaggcggccgcgcgcgagctgttccggcccgtggtcgcc
cagggccgctcctcgaacgtgttcctgcgcaatgccgcccgcctgtacctcgacgtcggc
tcgcaccccgagtacgcgacggccgagtgcgacgactggtgggagctggtggcgcaggac
aaggcgggggagcggatcctcgccgacctcatggcgcgcgcgaacgcggccctcgccgag
cgcggcgaggacgcccgcatccacctgttcaagaacaacgtggaccacgagggcaattcc
ttcggcagccacgagaactacctcgtggaccgtcgcggcgagttcacccgcctgccgcgg
atcctcctgcccttcctcgccacccgccagatcgtcaccggcgcgggcggcgtggtcacc
gaggaggacggcggctcccgcttcgtgttctcgcggcgcagcgaccacatgtgggaggcc
gtgtcctcggcgacgacccgcacccggccgctgatcaacacgcgcgacgagccccacggg
gaccccacgcgcttccgccgtctgcacgtgatcgtgggcgactcgaccatgtccgaggtc
tccacgtggctgcgcttcgcgaccaccgacctcgtgctgcggctcatcgagtccggccgc
gcggtcgacgtccccgagctcgaggacacgatctccgcgatccgcgtcgtcgcccgcgac
ctccccggcaccgagccgctgccgctcgccagcggccgcaccgcgagcgccctgcagatc
cagcagcgctatctcgacctggtcgcgcccctcgcccgcgaggacgagcacgacgtcctg
gagacctggcagcgcgccctggacgcggtcctcaccggcgaccgctcctgggccgcgcag
accctggactgggcgatcaaggagagactgttcacccaggtcgccgcgcgccacgggctc
gccctgggcgatccgcgcatcgagcgcctcgacctcgcctaccacgacatcgacccggag
cagggcctcgcggcctcgctgcgccggcgcggacaggcgccctccgtgctgtccgagacg
gcgatcgagtccgcacgcgccgcagcgcccgcgacgacccgcgcccacctgcgcgggcgc
ttcgtcaccgcgtccgaggaggcgcacgtggaccacgtcgccgactggaccacgatgcgg
ctcgtgcgccagggcgcgatgcccgtgagcgtcatggacccgttccagaccgaatcggag
caggtggatgcgctcatcgcccagatccgcgcgcacggatcgacggacgcggcaccaccc
gcctga
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