Brachybacterium kimchii: M4486_07990
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Entry
M4486_07990 CDS
T08303
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
bki
Brachybacterium kimchii
Pathway
bki00300
Lysine biosynthesis
bki01100
Metabolic pathways
bki01120
Microbial metabolism in diverse environments
bki01230
Biosynthesis of amino acids
Module
bki_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
bki00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M4486_07990 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bki01002
]
M4486_07990 (dapE)
Enzymes [BR:
bki01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
M4486_07990 (dapE)
Peptidases and inhibitors [BR:
bki01002
]
Metallo peptidases
Family M20
M4486_07990 (dapE)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
GGDEF_2
TPR_18
Motif
Other DBs
NCBI-ProteinID:
UQN31208
LinkDB
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Position
complement(1675896..1677029)
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AA seq
377 aa
AA seq
DB search
MTSSSSSAPAGSAPSLDPRADIVELTAAIVDIESVSGNEKALADAVEQALRTHARHLTVL
RDGDTVIARTDLGREERVVLAGHLDTVPVADNLPSSRRVREGREELVGRGSCDMKGGVAM
LLAVAVEATEPARDLTFLFYDHEEVAAADNSLTRIARTHPEHLRGDFAILGEPTSAGVEG
GCKGTMKLEVTAHGTAAHSARDWVGDNAIHHLAPVLQRLDAYEARRAVIDGLEYRECLNA
VAIGGGIAGNVIPDRASLTLNYRFAPDTSPAQAEAHVRELLEGCDVDIVVTDSAAGALPG
LDTPAAREFLAALGDGVGVAAKQGWTDVARFAELGTPAVNFGPGDPLLAHTDDEHVPFED
LRAALDGLRRWLEPSAR
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgtcctccagctccgcccccgccggctccgcgccgtccctcgacccccgcgcc
gacatcgtcgagctcaccgccgcgatcgtggacatcgagtccgtctccgggaacgagaag
gcgctcgccgatgccgtcgagcaggcgctgcgcacccatgcccggcacctcacggtcctc
cgggacggcgacaccgtcatcgcccgcacggacctcgggcgcgaggagcgcgtggtcctc
gcgggtcacctcgacacggtgccggtcgcggacaacctgccctcgtcgcggcgcgtgcgc
gagggccgcgaggagctcgtgggccgcggcagctgcgacatgaagggcggcgtcgcgatg
ctgctcgcggtcgcggtcgaggcgaccgagcccgcgcgggacctcaccttcctcttctac
gaccacgaggaggtcgccgcggccgacaactccctgacccgcatcgcccgcacccacccc
gagcacctgcgcggcgacttcgcgatcctcggcgagcccacctccgcgggcgtcgagggc
ggctgcaagggcaccatgaagctcgaggtcaccgcgcacgggaccgcagcgcactcggcc
cgcgactgggtcggcgacaacgccatccatcacctcgccccggtcctgcagcggctggac
gcctacgaggcccgccgcgccgtcatcgacggcctcgagtaccgcgagtgcctgaacgcg
gtcgccatcggcggcggcatcgccggcaacgtcatccccgatcgcgcctccctcaccctg
aactaccgcttcgcgcccgacaccagccccgcgcaggccgaggcgcacgtgcgcgagctc
ctcgaggggtgcgacgtggacatcgtcgtcaccgacagcgccgccggcgccctgccgggc
ctggacacccccgccgcccgcgagttcctcgcggcgctcggcgacggcgtgggcgtcgcg
gccaagcaggggtggaccgacgtcgcccgcttcgccgagctcggcacccccgccgtgaac
ttcggccccggcgaccccctcctcgcccacaccgacgacgagcacgtgcccttcgaggac
ctccgcgccgcgctcgacgggctgcgccgctggctcgagccgtcggcccgatga
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