Brachybacterium kimchii: M4486_08180
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Entry
M4486_08180 CDS
T08303
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bki
Brachybacterium kimchii
Pathway
bki00470
D-Amino acid metabolism
bki00550
Peptidoglycan biosynthesis
bki01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bki00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M4486_08180 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M4486_08180 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bki01011
]
M4486_08180 (murD)
Enzymes [BR:
bki01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
M4486_08180 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bki01011
]
Precursor biosynthesis
Amino acid ligase
M4486_08180 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
MurD_N
Pyr_redox_2
2-Hacid_dh_C
NAD_binding_7
Mur_ligase
TrkA_N
AlaDh_PNT_C
Epimerase
Pyr_redox
3HCDH_N
DFP
GFO_IDH_MocA
Motif
Other DBs
NCBI-ProteinID:
UQN31245
UniProt:
A0ABY4N9L4
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All DBs
Position
complement(1723379..1724923)
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AA seq
514 aa
AA seq
DB search
MSSDGTPVDARPWPGLDVAGLRILVVGFGVSGYAVADQTMQRGASVIVVDAADTPRNRER
ARILEVFDVHVRLGAEHTRTLPEDADVDLVVTSPGWRPDQPLLAQAAAAGIPVWSEIELA
RRMQAPDGPAWLGVTGTNGKTTVVTMLETILRADGLRAVACGNVGLPVIEAALDPEGFDV
LAVELSSFQLHWTQHVDCEAAAVLNITEDHLDWHGGLEAYARAKGKIFEGVRVACVYNTA
DDLTRRLVEDADVIEGARAVGVTLGAPGPSELGVVDDLLVDRAFVEDRRRQAAELGSLAD
LAHLGPHGAPPHVVFNALAAAALARAHGVSQAAVREGLRAFRAGSHRSEIVAVGAGIAYV
DDSKATNPDAARASLLGMEHVVWIAGGDTKGADVDALVAEVSGRLRGVVLIGADDAPFRE
ALERHAPAIPSVRVPAGDTEDPEGRSRLMREAVDAAAGLAREGDAVLLAPAAASIDQFAD
YAERGDLFAAAARAATGMQDAEDTQEPDGPEGRA
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcggacggcaccccggtcgacgcgcgcccctggccgggcctcgacgtcgccggg
ctcaggatcctcgtcgtcggcttcggcgtctccgggtacgcggtcgccgaccagaccatg
cagcgcggtgcgagcgtgatcgtggtggatgctgcggacaccccgcgcaatcgcgagcgc
gcccgcatcctcgaggtcttcgacgtccacgtgcgcctgggcgccgagcacactcgcaca
ctccccgaggacgcggacgtcgacctcgtggtcacgtcccccggatggcgccccgaccag
cccctgctcgcgcaggccgcagccgctggcatcccggtgtggagcgagatcgagctcgcc
cggcgcatgcaggcgccggacggtcccgcgtggctcggcgtcaccggaaccaacggcaag
accaccgtcgtgaccatgcttgagacgatcctgcgcgccgacgggctgcgcgccgtcgcc
tgcgggaacgtcggcctgcccgtcatcgaggcggccctcgaccccgaggggttcgacgtc
ctggccgtcgagctctcgagcttccagctgcactggacccagcacgtggactgcgaggcc
gccgccgtcctcaacatcaccgaggaccacctcgactggcacggcggcctcgaggcctac
gcccgcgccaagggcaagatcttcgagggcgtccgtgtggcctgcgtctacaacacggcc
gacgacctcacccggaggctcgtcgaggacgccgacgtcatcgagggcgcccgcgccgtc
ggcgtgaccctcggcgcccccggcccctccgagctcggggtcgtcgacgacctgctcgtg
gaccgcgccttcgtcgaggaccgccgccggcaggcggccgagctcggctccctggccgac
ctcgcccacctgggccctcacggcgctccgccccacgtcgtcttcaacgcgctcgccgcc
gcggccctggcccgcgcccacggcgtctcccaggcggcagtgcgcgaggggctccgcgcc
ttccgcgccggcagccaccgcagcgagatcgtcgcggtcggcgccggcatcgcctacgtc
gacgactccaaggccaccaatcccgacgcggcccgcgcctcgctgctcggcatggagcac
gtggtctggatcgcgggcggggacaccaagggggccgacgtcgacgcgctggtcgccgag
gtgtccggacgcctccgcggcgtcgtcctcatcggcgccgacgacgcgcccttccgcgag
gcgctcgagcgacacgcgcccgcaatacccagcgtgcgcgtgcccgcgggtgacactgag
gaccccgaaggacgttcccgactgatgcgggaggccgtcgacgcggcggccggactggcc
cgggagggcgacgcggtgctcctcgcacccgctgcagcctccatcgaccagttcgcggac
tacgccgagcgcggcgacctcttcgccgccgccgcccgcgcggccacggggatgcaggac
gccgaggacacgcaggagccggacggaccggaaggacgcgcatga
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