Brachybacterium kimchii: M4486_08900
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Entry
M4486_08900 CDS
T08303
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
bki
Brachybacterium kimchii
Pathway
bki03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M4486_08900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bki03000
]
M4486_08900
03400 DNA repair and recombination proteins [BR:
bki03400
]
M4486_08900
Enzymes [BR:
bki01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
M4486_08900
Transcription factors [BR:
bki03000
]
Prokaryotic type
Helix-turn-helix
AraC family
M4486_08900
DNA repair and recombination proteins [BR:
bki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M4486_08900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
HTH_18
AlkA_N
HTH_AraC
HTH_23
HTH_29
Motif
Other DBs
NCBI-ProteinID:
UQN31378
UniProt:
A0ABY4NA11
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All DBs
Position
1881976..1883613
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AA seq
545 aa
AA seq
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MDEMTDDERFAAIRAQDARFDGTFFTCVRSTGIFCRPSCPARTPARANVDFAPSAAAAVE
AGFRACKRCGPSAPPGSPDEDPAGDLARRALRLIDGGALDDGSVPQLAARLAVSERTLHR
ALSARTGAGALAHARMRRARRAHDLVLETDLPLSRVAFAAGFGSERQLHDTFTTVFGHAP
STVRERRGRDRARADGPTGPAADGAAHLRARLAVRLPFDGDGLARWFAARAVPGVDEVVI
DEVGESAAPVWRSAVRLPHGPAVLEVALPSLPGTGSSPAGADPSVAGAGPSVTGTGPDLA
SAGTTRLPATMHLADVRDYGAAVGLARRLLDLDADPLGIDEALPRSLPALGPLVAARPGV
RLPGLPSLADALMWAIVGQQITAAQARDQIARATDLAGETLPPSLHVGGVHRLGPTPAEA
AARAEDWYRGPGARRRALVGALTETPDADALDPAQLHDAVLALSGVGPWTAGYALLRGTR
GSDLAPPRDVALLAAARDLGLADDLDDLPASLAPAAPWRSYASLHLWHHAASLPPARRTR
RTRTS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggacgagatgacggacgacgagcgcttcgccgcgatccgggcgcaggatgcccgcttc
gacggcacgttcttcacgtgcgtccgctcgacggggatcttctgccgcccctcgtgcccg
gcgcgcaccccggcgcgcgcgaacgtcgacttcgccccgtcggccgcggcggcggtcgag
gccggtttccgcgcctgcaagcgctgcggcccgtcggccccgcccggatcgccggacgag
gaccccgccggcgatctcgcgcgccgcgcgctgcgcctcatcgacggcggcgcgctcgac
gacggctcggtgccgcagctcgccgcgcgcctcgcggtctccgagcgcacactgcaccgg
gcgctcagcgcccgcaccggggcgggcgccctcgcccatgcgcgcatgcgtcgtgcccgg
cgcgcccacgacctcgtcctggagacggatctcccgctctcgcgggtcgcgttcgccgcc
gggttcggcagcgagcgccagctccacgacacgttcacgaccgtgttcggccacgcgccc
tcgaccgtccgggagcgcagggggcgggacagggcacgggccgacgggccgacgggaccc
gcggccgacggcgccgcccatctgcgggcgcgcctggcggtgcgcctccccttcgacggg
gacgggctcgcccgctggttcgccgcgcgcgccgtgcccggcgtcgacgaggtcgtcatc
gatgaggtcggggagagtgcggcccccgtctggcgatccgccgtgcgcctcccccacggc
cccgccgtgctcgaggtcgcgctgccgtcgctgccgggcacgggctcgtcccccgcgggc
gccgatccctccgtcgcgggcgccgggccctccgtcacgggcaccgggcccgacctcgcg
agcgcgggcacgacgcgtctgcccgccaccatgcacctggccgacgtgcgcgactacggc
gcggcggtcggcctcgcgcggcgactgctggacctggacgcggatcccctcggcatcgac
gaggcgctcccgcgctccctgccggccctcggcccgctcgtcgcggccaggcccggggtg
cgcctgcccggactgccctcgctcgccgacgcgctgatgtgggcgatcgtcgggcagcag
atcaccgccgcccaggcccgtgaccagatcgcgcgcgccacggacctcgccggcgagacg
ttgccgccctcgctgcacgtgggcggcgtgcaccgcttgggcccgacgcccgcggaggcc
gccgcccgtgccgaggactggtaccgcggacccggtgcccgccgccgcgccctggtcggc
gcgctcaccgagacccccgacgccgacgccctggatcccgcgcagctccacgacgccgtg
ctcgcgctgtccggcgtcggcccgtggaccgccgggtacgcgctgctgcgcggcacccgc
ggcagcgacctggctcccccacgggacgtcgccctgctcgccgccgcccgcgacctcggc
ctcgccgacgacctcgacgacctccccgcgtccctcgcacccgccgccccctggcgctcg
tacgcgagcctgcacctgtggcatcacgccgcctccctgccacccgcccgccgcacccga
aggacacgcacctcatga
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