Brachybacterium kimchii: M4486_10225
Help
Entry
M4486_10225 CDS
T08303
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bki
Brachybacterium kimchii
Brite
KEGG Orthology (KO) [BR:
bki00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bki03032
]
M4486_10225 (topA)
03400 DNA repair and recombination proteins [BR:
bki03400
]
M4486_10225 (topA)
Enzymes [BR:
bki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
M4486_10225 (topA)
DNA replication proteins [BR:
bki03032
]
Prokaryotic type
DNA Topoisomerases
M4486_10225 (topA)
DNA repair and recombination proteins [BR:
bki03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
M4486_10225 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
UQN28031
LinkDB
All DBs
Position
2160444..2163194
Genome browser
AA seq
916 aa
AA seq
DB search
MPGSRHLVIVESPAKARTIARYLGDDYVVEASVGHIRDIPVPRDLPADMKKGPYGKFGVD
VENGFDPYYVVSADKKKTVADLKKKLKDADTLYLATDEDREGEAIAWHLLETLKPKKSLP
VHRMVFHEITRDAIQAALTNTREIDDHLVDAQETRRILDRLVGFELSPVLWRKIRPSLSA
GRVQSVATRLVVERERERMAFVPSDYWDVTGTFAGSDAAFSARISSVDGSRVATGSDFAD
DGTLKKKAATATVLTEESATALVSALEGAQARVASLESKPYTRRPAAPFTTSSLQQEASR
KLRLGARQTMRVAQGLYENGFITYMRTDSVALSGEAISASRAQAAELYGSQYVPEKPRHY
QNKSQNAQEAHEAIRPAGDRFRTPAQVAGQLSGDDFRLYELIWKRTVASQMADAKGTTSS
VELAVEKAGRAATFRASGTVITFRGFMAAYEEGRDASRYGEQDENDKRLPQMDEGDMLDV
EALVPDGHTTTPPPRFTEASLVRALEERGIGRPSTYASTVTTIQDRGYVLRRGSALVPSW
TAFAVVKLLEEHFGPFIDYDFTAQMEEQLDKMARGELGRSEYLDDFYRADGTDGPIGLQP
MVEHQGDIDPREINSIPIGEGITLRVGRYGAYVERPAPVDPDAAPAAPDAEPAPPQRASL
PDDLAPDELTVEKARELLERQKDDGRVLGEDPETGHDVIVKDGRYGPYVTEVLPEDPDDK
TPKSKRPKPRTASLLQSMDLATVDLDDALKLLSLPRVVGADEDGTEITAQNGRYGPYLKK
GTDSRSLETEEQIFSITLDEAKKIYSQPKQRGRAAAKPPLKELGTDPTSEKPIVVKDGRF
GAYITDGTTNVTLRRDDSLDALTHEVAVERLAEKRAKGPAKKGGRTTTRKSTTKSTSKST
TKKAAPKTSSSSTKKS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggctcgcgccatctcgtgatcgtggagtcccctgccaaggcgaggacgatcgcc
cggtacctcggggacgactacgtcgtcgaggcgtccgtcggccacatccgcgacatcccc
gtcccgagggacctcccggcggacatgaagaagggtccctacggcaagttcggcgtcgac
gtcgagaacggcttcgacccctactacgtggtcagcgccgacaagaagaagacggtcgcg
gacctcaagaagaagctcaaggacgccgacaccctctacctcgccaccgatgaggaccgc
gagggggaagcgatcgcctggcacctgctggagaccctcaagcccaagaagtccctgccg
gtgcaccgcatggtcttccacgagatcacgcgcgacgcgatccaggcggcgctgacgaac
acccgcgagatcgacgaccacctggtcgacgcgcaggagacccgccgcatcctcgaccgg
ctcgtgggcttcgagctctcccccgtgctgtggcgcaagatccgcccctcgctctccgcc
ggccgcgtgcagtccgtggcgacccgcctggtcgtggagcgcgagcgcgagcgcatggcc
ttcgtcccctccgattactgggatgtgaccggcaccttcgccggatccgatgcggccttc
tcggcccgcatctcgagcgtcgacggctcgcgcgtcgcgaccggctccgacttcgccgat
gacggcaccctcaagaagaaggcggccacggccacggtgctcaccgaggagtcggcgacc
gcgctggtctccgcgctcgagggggcgcaggcacgggtcgcgagcctggagtccaagccg
tacacccgtcggcccgccgccccgttcaccacgtcgtccctgcagcaggaggcctcgcgc
aagctgcgtctgggcgcccgccagaccatgcgcgtcgcgcaggggctgtacgagaacggc
ttcatcacctacatgcgtacggactccgtggcgctgtcgggcgaggcgatcagcgcctcg
cgcgcccaggccgccgagctctacggctcgcagtacgtgcccgagaagccgcgccactac
cagaacaagtctcagaacgcgcaggaggcgcacgaggcgatccgccccgccggggaccgc
ttccgcacgcccgcgcaggtcgccggccagctctcgggcgacgacttccgtctctacgag
ctgatctggaagcgcacggtcgcctcccagatggccgacgccaagggcaccacgagctcc
gtcgagctggccgtcgagaaggccggccgggccgccaccttccgcgcctcgggcaccgtc
atcaccttccgcgggttcatggccgcctacgaggagggccgcgacgcctcccgctacggc
gagcaggacgagaacgacaagcgcctgccgcagatggacgagggcgacatgctggacgtc
gaggcgctcgtgcccgacggccacaccaccacccctcccccgcgcttcacggaggcctcg
ctggtgcgggcgctcgaggagcgcggcatcggccgcccctcgacctacgcgtcgaccgtg
accaccatccaggaccgcggctacgtgctgcgccgcggctcggcgctcgtgcccagctgg
acggcgttcgccgtggtcaagctgctcgaggagcacttcgggccgttcatcgactacgac
ttcaccgcccagatggaggagcagctcgacaagatggcccgcggcgagctgggccgcagc
gagtacctcgacgacttctatcgggccgacgggacagacggccccatcggcctgcagccc
atggtcgagcaccagggcgacatcgacccccgcgagatcaactcgatcccgatcggcgag
ggcatcacgctgcgcgtgggccgctacggcgcctacgtggagcgccccgcgcccgtggac
ccggacgccgcgcccgcggctcccgacgccgagccggccccgccgcagcgcgcgagcctg
cccgacgatctcgcgcccgacgagctgacggtcgagaaggcccgtgagctgctcgagcgc
cagaaggacgacggccgcgtgctgggcgaggacccggagaccggccacgacgtgatcgtc
aaggacggccgctacggcccctacgtcaccgaggtgctgccggaggacccggacgacaag
acccccaagtccaagcgccccaagccccgcaccgcgtcgctgctgcagtccatggacctg
gccacggtcgacctcgacgacgccctcaagctgctctcgctgccgcgcgtggtgggggcc
gacgaggacggcacggagatcaccgcgcagaacggccgctacggcccgtacctcaagaag
ggcacggactcgcgctccctggagaccgaggagcagatcttctcgatcaccctggacgag
gcgaagaagatctactcccagcccaagcagcgcggccgcgctgccgcgaagccgccgctc
aaggagctgggcacggatccgacgagcgagaagccgatcgtggtgaaggacggccgcttc
ggcgcctacatcaccgacgggacgacgaacgtgaccctgcgccgcgacgactccctggac
gccctcacccacgaggtcgccgtcgagcgcctcgccgagaagcgcgcgaagggcccggcc
aagaagggcgggcgcaccaccacccgcaagtccacgacgaagagcacgtcgaagagcacg
accaagaaggccgcgccgaagacgagcagctcgagcaccaagaagagctga
DBGET
integrated database retrieval system
