Brachybacterium kimchii: M4486_10885
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Entry
M4486_10885 CDS
T08303
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bki
Brachybacterium kimchii
Pathway
bki03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M4486_10885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bki03400
]
M4486_10885
Enzymes [BR:
bki01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M4486_10885
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M4486_10885
DNA repair and recombination proteins [BR:
bki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M4486_10885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Zn_ribbon_8
DUF7577
Motif
Other DBs
NCBI-ProteinID:
UQN28157
LinkDB
All DBs
Position
2329132..2329986
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AA seq
284 aa
AA seq
DB search
MPELPELDAAVAQIDRLLTSRRLHGADVAAISVLKTADPPLADLTGRELTGVSRRGKHLL
LDLEGTSLVMHLARAGWLRHHAQAPAGAPGPRKGPLAVRMVWDDGSALDVTEQGTRKAVA
LWASANPEELETLARLGPEADALDEAAFRGICAGTHAHLKTVLTDQTLMAGIGSAWSDEV
LHTARLSPFAAADGLDREAAQRLHAALREVLDRSAQGLRDLPLDRIKRAKKSLLRVHGRA
GEDCPRCGTTIAEVSFAERSLQYCPTCQTGGRRLSDRRMDRLLR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgccggaactgcccgagctcgacgccgccgtcgcgcagatcgaccgactcctcacctcg
cgtcgtctgcacggcgcggacgtcgccgccatcagcgtgctgaagacggcggacccgccg
ctggccgatctcacgggccgcgagctcaccggcgtcagccgccgcggcaagcacctcctg
ctggatctcgaggggacctcgctggtcatgcatctggcgcgcgcgggctggctgcggcac
catgcgcaggcccctgcgggtgcgccgggaccgcggaagggccctctcgcggtgcgcatg
gtgtgggacgacggctccgccctggacgtcaccgagcagggcacccgcaaggccgtcgcg
ctgtgggcctccgccaacccggaggagctggagaccctggcccgcctgggcccggaggcc
gatgcgctcgacgaggccgcgttcaggggcatctgcgccgggacccacgcgcacctgaag
acggtcctcaccgaccagaccctgatggccggcatcggcagcgcctggtccgacgaggtc
ctccacaccgcgcgcctctcccccttcgccgcggccgacggcctggaccgcgaggccgcg
cagcgtctgcacgcggccctgcgcgaggtgctggaccgctccgcgcagggactgcgggac
ctgccgctggaccgcatcaagagggcgaagaagtcgctgctgcgcgtgcacggcagggcc
ggggaggactgccccaggtgcgggacgacgatcgcggaggtctccttcgccgaaaggtcc
ctgcagtactgccccacctgccagaccggcggtcggcgtctgagcgaccgtcggatggac
cgcctgctgcgctga
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