Brachybacterium kimchii: M4486_17670
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Entry
M4486_17670 CDS
T08303
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bki
Brachybacterium kimchii
Pathway
bki03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M4486_17670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bki03400
]
M4486_17670
DNA repair and recombination proteins [BR:
bki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M4486_17670
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
M4486_17670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
AAA_25
DnaJ_CXXCXGXG
SMC_N
Anti-TRAP
nSTAND1
DUF5351
AAA_23
AAA_22
AAA_16
AAA_18
MobB
AAA_14
cobW
Viral_helicase1
DUF463
TMEM106_N
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UQN29439
LinkDB
All DBs
Position
complement(3899677..3902235)
Genome browser
AA seq
852 aa
AA seq
DB search
MPDAHDDLVRVHDAHLHNLRHVSTSFPRGTLVAFTGVSGSGKSSLAFGTIHGEAQRRYLE
SIAPFARRLIGSAMDPRVESLHGLPPTVALEQRTSGGGARSTVATLTTLSHAIRLLYARA
GEHPADVLTRGHPAHGGRLLAEAFSPNTTEGMCPVCRGTGVLHEPTERSMVPDPSLSIDD
GAIQAWPGAWMGKNFHDILATLEVAPMDVPWRDIPREAREWILFTDEQPVVTVHPVRGVD
QVQRTYEGRWQSVARYLRHAVSAAGSEKTRERALRHLDTSLCPACEGHRLHADALRVTYL
GLPIFDLLARSAQQVLAMCEERATQLGMEHGTEDAATDRDDVSPEAEAERLLLPNLLPVL
RTMVGLGVGHLTLDRPARTLSTGELQRLRLASQLRAGLFGVAYVLDEPSAGLHPSEKGML
QDLFDRFLEEGNSVLLVEHDMWLIEKADWVIDMGPGAGVEGGSILHSGPVAQLADAPGSR
TAAHLGRPLPPLRTRDQSRRPTGGLLLTGVEARTIHDMDVEVPLGSFTAITGVSGSGKTT
LISDVIARVLAGTVRTSVDDDEDEVGGAEPDAQLPGAERPPRVREVRGAEQIDRLVRITQ
KPIGRTPRSCLATYTGLFDRVRRLFADTDEARRRGWGVGRFSYNVTAGRCPTCQGEGQIE
VELVFLPGTFTPCPDCHGARYTDETLEVTWNSLTIAEVLDLSVREARGVFASDARIMRAL
DALEAIGLGYLTLGQSATELSGGEAQRIKLATELQRTARGHTAYLLDEPTAGLHPADVDL
LVAELNRLVDGGSSVIVVEHDMRVVAQADHVIDLGPGAGEDGGRIVASGTPAQVAQCQGS
ATGRWLAAHTAG
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatgcccacgatgacctggtccgcgtgcatgacgcgcacctgcacaacctgcgc
catgtgagcacgtccttcccgcgggggacgctcgtcgcgttcaccggcgtgtccggttcg
gggaagtcctccctcgccttcggcacgatccacggcgaggcgcagcgccgatacctcgag
tcgatcgctccgttcgcacgccgcctcatcggcagcgcgatggacccccgggtcgagagc
ctccatgggctgccgcccacggtcgccctcgagcagcgcaccagcggcggcggcgcacgc
tccaccgtcgccaccctgaccacgctctcccacgcgatccgcctgctctacgcccgcgcc
ggcgagcatcccgccgacgtcctcacccgcggccaccccgctcacggcggccggctgctc
gccgaggcgttcagcccgaacacgaccgagggcatgtgccccgtctgccgcggcacgggc
gtgctgcacgagcccaccgagcgctcgatggtccccgacccctcgctcagcatcgacgac
ggcgccatccaggcgtggccgggcgcctggatgggcaagaacttccacgacatcctcgcc
accctcgaggtcgcgccgatggacgtgccctggcgcgacatcccccgtgaggcgcgcgag
tggatcctgttcaccgacgagcagcccgtggtcaccgtccatccggtgcgcggcgtcgac
caggtccagcgcacctacgagggccgctggcagtccgtggcccgctacctgcggcacgcg
gtctccgcggccggttccgagaagacccgcgagcgggccctgcgccacctcgacacgtcc
ctgtgccccgcgtgcgaggggcatcgtctccacgccgacgccctgcgcgtcacgtacctg
ggtctgccgatcttcgacctcctcgcgcgcagcgcgcagcaggtgctcgcgatgtgcgag
gagcgtgcgacgcagctcgggatggagcacggcacggaggatgcggccaccgaccgcgac
gacgtctcccccgaggcggaggccgagcgcctgctgctgccgaacctgctgccggtgctg
cgcacgatggtgggcctcggggtcgggcacctcacgctggaccggccggcgcgcaccctg
tccacgggcgagctgcagcgtctgcgcctcgcctcgcagctgcgggcgggcctgttcggc
gtcgcctacgtgctcgacgagccgtcggccggactccacccgagcgagaaggggatgctg
caggacctcttcgaccgcttcctcgaggaggggaactcggtgctgctcgtcgagcacgac
atgtggctcatcgagaaggccgactgggtgatcgacatgggccccggggcgggcgtcgag
ggcggcagcatcctgcattcgggcccggtcgcgcagctcgcggacgcccccgggtcccgc
acggccgcgcacctcggccgacccctgccgcccctgcgcacccgcgatcagtcccgccgg
ccgacgggcggactgctcctgacgggcgtcgaggcgcggacgatccatgacatggacgtc
gaggtgcccctgggctccttcacggcgatcaccggcgtctccggttcggggaagaccacg
ctgatcagcgacgtcatcgcgcgggtcctcgccgggacggtccgcaccagcgtggacgac
gacgaggacgaggtgggcggtgcggaacccgacgcccagctccccggcgccgaacggcct
ccgcgggtccgggaggtccgcggtgcggagcagatcgaccgactggtgcggatcacgcag
aagcccatcgggcgcactccccgttcatgcctggcgacgtacacgggcctgttcgacagg
gtgcgccgcctgttcgcggacaccgacgaggcccggcggcgcggctggggcgtcggccgc
ttctcctacaacgtcaccgcgggccgctgccccacctgccagggcgagggccagatcgag
gtcgagctcgtgttcctgcccggcaccttcaccccgtgccccgactgccacggcgcccgg
tacacggacgagaccctcgaggtcacgtggaactcgctgaccatcgccgaggtcctggac
ctctcggtgcgcgaggcccgcggggtcttcgcatccgacgcccgcatcatgcgcgccctc
gatgccctggaggcgatcggactgggctacctcacgctcggccagagcgccacggagctc
tccggcggcgaggcgcagcgcatcaagctcgcgaccgagctgcagcgcaccgcgcgcggg
cacaccgcctacctcctggacgagccgaccgcgggcctccatccggcggacgtggacctg
ctggtcgccgagctgaacaggctcgtggacggaggctcgagcgtcatcgtcgtcgagcac
gacatgcgcgtggtcgcgcaggcggatcacgtcatcgacctgggtccgggcgccggcgag
gacggcgggaggatcgtcgcctcgggcacccccgcgcaggtcgcgcagtgccagggctcg
gcgacggggcggtggctcgccgcgcacaccgcgggctga
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