Brachybacterium kimchii: M4486_19105
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Entry
M4486_19105 CDS
T08303
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bki
Brachybacterium kimchii
Pathway
bki03420
Nucleotide excision repair
bki03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bki00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M4486_19105
03430 Mismatch repair
M4486_19105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bki03400
]
M4486_19105
Enzymes [BR:
bki01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M4486_19105
DNA repair and recombination proteins [BR:
bki03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M4486_19105
MMR (mismatch excision repair)
Other MMR factors
M4486_19105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
UMP1
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UQN29709
LinkDB
All DBs
Position
4207027..4209750
Genome browser
AA seq
907 aa
AA seq
DB search
MSSLFDDMSLPESFRRLSGVRVDPDAPDAPQAPDASPSDDELPPPPEDDAPPPEDEGEPE
GAWAPAAEPAAPSAAPRGPLPDVSDLVEGLNPPQREAVEHRGSPLLIVAGAGSGKTRVLT
RRIAHLLRTGEALPGEILAITFTNKAAAEMRERVEELVGPAGRGMWVSTFHSACVRILRR
EHAAAGLKSSFTIYDSADSLRLITNIAKDFGLDTKKNPPRGIASKISSLKNELVDPIDYA
DQAESAKNPFEKSIAQVFTAYTERLRQANAVDFDDLIGLTVEVLRENPAVRETYRRRFRH
VLVDEYQDTNHAQYSLVRELVGDDPRADLTVVGDSDQSIYAFRGATIRNIVEFEQDFPSA
RTIVLEQNYRSTQNVLSAANAVIEENQGRRKKNLWTDQGEGEQITLYVADDEQAEARYIG
RQIDSLVDSGRRASDIAIFYRANAQSRALEDQLIRVGLPYKVVGGTRFYERREIKDAIAY
LQVLANPDDEINLRRILNVPKRGIGDRAEAAIALLAEQDRISFGDALRRAEEAPGIATRS
LNSVRTFVSMLDDLRELYASGTGPAELVEQVLQRSGYYAELQNSDDPQDESRLENLAELV
GVASEFEAQMEAAAAAASEFEDDADDSVDGTAGDGAAGDGSEGGGTASDAPGDGSDGSAL
PATDDPEAPLLDQFLEKVSLVADADQIPGQEDQFVTLMTLHTAKGLEFPVVFLTGLEDGT
FPHQRTLADPDQLEEERRLAYVGITRAREKLYLTRAQMRATWGAPQFFPGSRFLDEIPEA
VLDVARAGSSLSGMGYAGSGGYGSGGFGGGGYGGGRGGSSRGPSFSGGAGGGRRDVARPS
FGSGRGARSAADMPSLVVGDRVTHDTFGMGTVSEVTGQDEKTQVEVQFKAPHGTKRLLLR
YAPLTKL
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgagctctctgttcgacgacatgtccctgcccgagtccttccgccgcctgagcggggtg
cgggtggaccccgacgcgcccgacgcgccccaggcgcccgatgcctcgccgtcggacgac
gagctgcccccgcccccggaggacgacgcccctccgcccgaggacgagggcgagcccgag
ggggcctgggcccccgccgccgagcccgcggcgccgtcggccgctccgcgcggccccctc
cccgatgtctccgatctcgtcgagggcctcaaccctccccagcgcgaggccgtcgagcac
cgcggcagcccgctgctgatcgtcgcgggcgccggctcgggcaagacccgcgtgctcacg
cgccggatcgcccatctgctgcgcacgggggaggcgctgcccggcgagatcctcgcgatc
accttcacgaacaaggccgccgccgagatgcgggagagggtcgaggagctcgtcggcccc
gcgggccgcggcatgtgggtctcgaccttccactccgcctgcgtgaggatcctgcgccgc
gagcatgcggccgccggtctcaagagctccttcacgatctacgactcggcggattcgctg
cggctgatcacgaacatcgccaaggacttcgggctggacacgaagaagaacccgccccgc
gggatcgcctcgaagatcagctcgctcaagaacgagctcgtcgaccccatcgactatgcc
gatcaggcggagagcgcgaagaacccgttcgagaaatccatcgcccaggtgttcaccgcc
tacaccgagcgcctgcgtcaggccaacgcggtggacttcgacgacctcatcggcctcacc
gtcgaggtgctgcgcgagaaccccgccgtgcgggagacctaccgtcggcgcttccgccac
gtgctcgtggacgagtaccaggacaccaaccatgcgcagtactccctggtgcgcgagctc
gtgggggacgacccgcgcgcggacctcaccgtggtgggcgactccgaccagtcgatctac
gccttccgcggggcgaccatccgcaacatcgtcgagttcgagcaggacttcccctcggcc
cgcacgatcgtgctcgagcagaactaccgctccacccagaacgtcctgagcgccgcgaac
gcggtgatcgaggagaaccagggccggcgcaagaagaacctgtggaccgaccagggcgag
ggcgagcagatcaccctctacgtcgccgacgacgagcaggccgaggcccgctacatcggc
cggcagatcgactccctcgtggacagcggccgccgcgcgagcgacatcgcgatcttctac
cgcgccaacgcgcagtcccgcgccctcgaggaccagctgatccgggtgggcctgccctac
aaggtggtcggcggcacccgcttctacgagcggcgcgagatcaaggacgcgatcgcctac
ctgcaggtgctcgccaaccccgacgacgagatcaacctgcgccgcatcctcaacgtcccc
aagcgcggcatcggcgaccgggccgaggccgcgatcgccctgctcgccgagcaggatcgc
atcagcttcggcgacgccctgcgcagggccgaggaggcccccggcatcgccacccgctcc
ctgaactcggtgcgcaccttcgtctcgatgctcgatgacctgcgggagctgtatgcgagc
gggaccggtccggcggagctcgtcgaacaggtcctccagcgctcgggctactacgccgag
ctgcagaacagcgacgatccgcaggacgagtcgcggctggagaaccttgccgagctcgtg
ggcgtggccagtgagttcgaggcccagatggaggccgccgcggccgccgcgagcgagttc
gaggacgacgcggacgactccgtcgacggcacggcaggcgacggcgcggcgggcgacggc
tcggagggcggcggcaccgcctccgacgcgcccggcgacggctccgacggctcggccctg
ccggcgaccgacgaccccgaggcgccgctgctggatcagttcctcgagaaggtctccctg
gtggccgacgccgatcagatccccgggcaggaggaccagttcgtcaccctgatgacgctg
cacaccgccaagggcctcgagttcccggtcgtcttcctcaccgggctcgaggacggcacc
ttcccgcaccagcgcaccctcgccgaccccgatcagctcgaggaggagcggcgcctggcc
tacgtgggcatcacccgcgcccgcgagaagctctacctcacgcgcgcccagatgcgcgcg
acctggggcgctccgcagttcttccccggcagccgcttcctcgacgagatccccgaggcg
gtgctcgacgtcgcgcgcgcgggctcctccctctcgggcatggggtacgcgggatccggc
ggctacgggagcggcggcttcgggggaggcggctacggaggcggtcgcggcggctcctcg
cgcggaccgtccttcagcggcggtgcgggcggcggccgacgggacgtcgcgcgcccgtcg
ttcggctccggccgcggcgcgaggtccgcggcggacatgccctcgctcgtcgtcggggac
cgcgtcacccacgacaccttcggcatgggcaccgtcagcgaggtcaccggacaggacgag
aagacccaggtcgaggtccagttcaaggcgccccacggtaccaagcgcctgctgctgcgc
tacgccccgctgacgaagctgtga
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